FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806746

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806746
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences110955
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG79577.17137578297508No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT68466.170068946870353No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT60875.486007841016629No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG48274.350412329322698No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT38183.4410346536884324No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT35493.1985940246045694No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT22352.014330133838042No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG21611.9476364291830022No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT21221.9124870442972377No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT21071.8989680501104051No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG17991.621378036140778No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG16181.4582488396196656No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT15331.3816412058942815No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT15151.3654184128700824No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC12021.0833220675048443No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT11571.0427650849443468No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT10900.9823802442431617No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT10850.9778739128475508No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC10580.9535397233112524No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC9870.8895498174935784No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9720.8760308233067459No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT9600.86521562795728No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG8690.7832003965571629No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC8690.7832003965571629No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT8610.7759902663241854No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG8450.7615700058582308No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG7960.7174079581812446No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA7630.6876661709702131No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT7380.665134513992159No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG7150.6444053895723492No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA7000.6308863953855166No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA6300.567797755846965No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT6070.5470686314271551No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT5860.5281420395655896No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT5700.5137217790996349No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG5540.49930151863368033No Hit
CATAGATGGCCCACTGACATTTTCCTACGGTAGGTGGCTTCTGGTGCATC5080.45784326979406065No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG5070.45694200351493847No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC4940.44522554188635033No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT4940.44522554188635033No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCGGTTGCAGGATGAATGGGG4930.4443242756072281No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGACTTGGTCTCAGAGTGGGAGTC4910.44252174304898384No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC4880.4398179442116173No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG4850.4371141453742508No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4330.39024829885989815No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4320.389347032580776No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG4250.38303816862692086No Hit
CATAGAACTGACCATACACTTGCCCTACACTGCTCACGATGGTATTACAT3940.3550989139741337No Hit
CATAGAAAAGGGAGGGATTACGGGTGCACAGGACATTGGGGAATTCTATG3810.3433824523455455No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT3800.3424811860664233No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3650.3289621918795908No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT3640.3280609256004686No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT3500.3154431976927583No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC3460.3118381325762697No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT3410.3073318011806588No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT3400.30643053490153666No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAATTCTGTCTGGCACAATGAGGCA3390.30552926862241453No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT3300.297417872110315No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT3290.2965166058311928No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG3290.2965166058311928No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC3170.2857014104817268No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTAGAATCTTGAACTCAGGAGTCT3170.2857014104817268No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT3080.27759001396962735No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3020.2721824162948943No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGCAGTTAGGCTACTTGGG2940.264972286061917No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGGTGGCTTCTGGTG2940.264972286061917No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATGTTTGCTATTACGAGGA2920.26316975350367267No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA2830.2550583569915732No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTAGGTGGCTTCTGGTGCA2760.248749493037718No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2730.2460456942003515No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGTCTCTCCCTCTCTCACACATCT2660.23973683024649634No Hit
CATAGAGCAGACAATGGATGATCAAGTGATTCTGCTAACTTCGCCTGCCT2640.23793429768825197No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG2640.23793429768825197No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC2600.23432923257176333No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTACGGTTGCAGGATGAATGGGGAC2580.232526700013519No Hit
CATAGACCAGGACAATCACAGGGCACATGTACACGGCAGGACTGTCTATG2560.2307241674552747No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAGATGTGGTTGCATGGGGGTC2530.22802036861790817No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2520.227119102338786No Hit
CATAGATGAGGGATGTAGGCTGTACACTACGGTAGGTGGCTTCTGGTGCA2420.21810643954756434No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC2400.21630390698932No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2380.21450137443107564No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT2330.20999504303546485No Hit
CATAGAATAGCTGTGTTGAAGAACCTCATGCCAAGTAAGTCTACAAAGAA2320.20909377675634266No Hit
CATAGATGGCCCACTGACATTTTCCTATGAGACCAAGGTCAAGGGCAGGG2250.2027849128024875No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCTCTCCCTCTCTCACACATCTAT2250.2027849128024875No Hit
CATAGAACTGACCATACACTTGCCCTACGGTTGCAGGATGAATGGGGACA2240.20188364652336532No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2230.20098238024424314No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2150.19377225001126583No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG1990.17935198954531115No Hit
CATAGAAAAGTGTATTATGGGCCCAGGACACTTGAAAGCTCCCTGGATCT1990.17935198954531115No Hit
CATAGATCCATGGTGTGCAAGGACAAAGCAGCAAACAATTTCAGAAAGTC1960.17664819070794466No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1960.17664819070794466No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG1880.16943806047496732No Hit
CATAGATGAAAACATTCCGAAGCTAGATCACACTGAACGAAATTTAGGTG1860.16763552791672298No Hit
CATAGACACTTGACCATGCCCTTGTTGGTCTCATAGACACTTGAAAGCTC1860.16763552791672298No Hit
CATAGAACATCTCCCTGTTCCTCCCACACTGCCAAGTAAGTCTACAAAGA1840.16583299535847867No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC1810.16312919652111216No Hit
CATAGAACTGACCATACACTTGCCCTGGATCTCAGAGTTAGCTTGCCTCT1810.16312919652111216No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC1780.16042539768374567No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAAGAAAGAAAACCC1730.15591906628813484No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT1700.15321526745076833No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTCCCAAAGTAGGCAATTCTATG1690.15231400117164617No Hit
CATAGATGGGTCCCATTCTGTTTGCATACGGTAGGTGGCTTCTGGTGCAT1690.15231400117164617No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTAGAATCTTGAACTCAGGAGTC1680.151412734892524No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT1670.1505114686134018No Hit
CATAGACAGGGGCCAGAACTCCTAAGTCTCATAGACAGGGGTGTGGTGTT1650.1487089360551575No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGTTCTGTCTATGACAGGGGTGTG1640.14780766977603532No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT1640.14780766977603532No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTGACGACATGTACACGGCAG1610.14510387093866883No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA1600.14420260465954665No Hit
CATAGACTTGTTGCCGAGACTGGAGTACACTGAACGAAATTTAGGTGAGC1530.1378937407056915No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC1520.13699247442656934No Hit
CATAGAACTGACCATACACTTGCCCTCATAGATGGGTCCCAAAGTAGGCA1510.13609120814744716No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTACGGTTGCAGGATGAATGGGGA1420.12797981163534766No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT1380.124374746518859No Hit
CATAGACAGGGGTGTGGTGTTCTGTCTATGTGTAGAACCATGTCGTCAGT1330.11986841512324817No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC1330.11986841512324817No Hit
CATAGACAATTTCAGTGCGGCCGATGCTGACGACATGTACACGGCAGGAC1280.11536208372763734No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG1270.11446081744851516No Hit
CATAGAACTGTCCCCTACTTTTCACCAGTTTGTAAAAGCAGCAAACAATT1260.113559551169393No Hit
CATAGAAGAGAACCAAAAATGGACCCATGTCGTCAGTGTCCAAGGTCAAG1200.10815195349466No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG1190.10725068721553782No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1190.10725068721553782No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG1180.10634942093641565No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTGAAGGATAGTTGGGTGC1170.1054481546572935No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT1130.10184308954080483No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)