FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806749

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806749
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102282
Sequences flagged as poor quality0
Sequence length150
%GC38

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1215211.880878355917952No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG71967.035451007997497No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG69116.756809604818052No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG56185.492657554603938No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA44004.301832189437047No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC43994.300854500303084No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG34783.4004028079231925No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG32943.2205080072740073No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT28052.742418020766117No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA21012.0541248704561896No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA19561.91235994603156No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA17871.7471304823918188No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG15811.545726520795448No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA15571.5222619815803367No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT15121.4782659705520034No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT12991.2700181850178915No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC12781.2494867132046694No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC12331.2054907021763361No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA8490.8300580747345574No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA7480.7313114722042979No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG7080.6922039068457793No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGCTATACCACACTA6690.6540740306212237No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA6670.6521186523532977No Hit
CATAGACCAGCAGACACTCCCATCATTACACTGACGATCATTGTTCACTG6530.6384310044778163No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT6240.6100780195928902No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGCCCTCTCTGCTGTTCCTT5880.5748812107702235No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG5580.5455505367513346No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG5520.5396844019475567No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGCTGAAGTGATGGGCTAG4980.4868891887135567No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC4750.46440233863240843No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT4210.4116071253984084No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA3870.3783656948436675No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG3690.36076729043233413No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC3600.3519680882266675No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA3560.3480573316908156No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGCGATCATTGTTCACTGCAG3350.3275258598775933No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT3320.32459279247570444No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGACATGGTTCTACACA3090.30210594239455624No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGACGCTATACCACACTACAC3010.29428442932285254No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT2800.27375295750963025No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC2750.2688645118398154No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2520.24637766175866724No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG2390.23366770301714865No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT2300.224868500811482No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC2290.223890811677519No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTATGACAAATGAGAAACCTGGA2210.21606929860581528No Hit
CATAGACCGCTTCCCAATTTTTGTAACAAATGAGAAACCTGGATGCTTCT2160.21118085293600047No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTACCATAGAGATCCCACCAT2140.20922547466807453No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2120.2072700964001486No Hit
CATAGAGTCCAACTATTCCAGCACCATACGGTAGCAGCATAATTTCCCAT1880.18380555718503744No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG1860.1818501789171115No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGGCCCCAGTG1820.17793942238125965No Hit
CATAGACATTTAATCCTCACAATGACCCATCTTGGTCTACCAGTTATTAG1800.17598404411333374No Hit
CATAGAAATGATGCTGAAGGGCCTGGAAATGATGCTGAAGTGATGGGCTA1750.1710955984435189No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGACGATCATTGTTCA1700.16620715277370407No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGACGCTATACCA1700.16620715277370407No Hit
CATAGATGTGTAGCCTGGGTCTGACACACTGACGACATGGTTCTACACAT1650.16131870710388926No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTATGGCTCAGGTATGTCTT1650.16131870710388926No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTCTACAAAGGATTCTGGGC1640.16034101796992628No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA1620.15838563970200034No Hit
CATAGAAATGATGCTGAAGGGCCTGATGCTGAAGTGATGGGCTAGATCTA1570.15349719403218554No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT1490.1456756809604818No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCATGGTTCTACACATAGAGA1490.1456756809604818No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGGCTCAGGTATG1480.14469799182651885No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT1480.14469799182651885No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGACATGGTTCTACACA1450.14176492442462993No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT1440.14078723529066697No Hit
CATAGAAATGATGCTGAAGGGCCTGCATGGTTCTACACATAGAAATGATG1440.14078723529066697No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG1340.13101034395103733No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA1340.13101034395103733No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT1330.13003265481707438No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1300.12709958741518546No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG1300.12709958741518546No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1280.12514420914725954No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAACACTGACGCTATACCACACT1270.12416652001329656No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG1230.12025576347744471No Hit
CATAGACCCAAGACCCCAGCCTTTACACTGACGACATGGTTCTACACATA1230.12025576347744471No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT1200.11732269607555582No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1060.1036350482000743No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTTCATCAGGAACCATGG1050.10265735906611134No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCTATGAGACCAAGTCT1050.10265735906611134No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC1030.1007019807981854No Hit
CATAGACGTGACTAAAAGCATGTTGGTCCCACGCTGTCCTTCTCTGAATC1030.1007019807981854No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)