FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806752

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806752
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences245343
Sequences flagged as poor quality0
Sequence length150
%GC34

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT2982312.155635171983713No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG152006.1954080613671465No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG146605.975308038134367No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG138195.632522631581092No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC104724.268310080173472No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA87603.5705114879984343No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG84753.454347586847801No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG62392.5429704536098443No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG61002.486315077259184No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA57762.354255063319516No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT54102.2050761586839647No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG41891.7074055505965118No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT35141.4322805215555365No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT33631.3707340335774814No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT32081.307557175056961No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA32021.3051116192432635No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC30991.2631295777747888No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC27951.139221416547446No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG22610.9215669491283631No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT21110.8604280537859242No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC19520.7956208247229389No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT17590.7169554460490007No Hit
CATAGACCCCATGACTCAGCTCCTCATTCTAAAAAAGAACGATGAAATAC17460.7116567417859894No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG17380.7083960007010593No Hit
CATAGAACACCTGAACTACATAGCGGATGCCTGGCCAACTGTTTTTTCTA16030.6533709948928643No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT15540.6333989557476676No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT15490.6313609925695862No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTTGGGCTGGTGTTTTCCTTGAT14520.591824506914809No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT14490.5906017290079603No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC14450.5889713584654952No Hit
CATAGACCAGTTACCACAAGAAGCAATGGGTCATTGTGAGGATTAAATGT14420.5877485805586464No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT14330.5840802468381001No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCTATGTTAGTGGGACAGCATCT13150.5359843158353815No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC12980.5290552410299051No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC11720.4776985689422563No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG11630.47403023522171No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG10580.43123300848200274No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC10320.42063559995598No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG10230.4169672662354336No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGACTGTTAATATAGAAGAGAC9570.3900661522847605No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT9280.37824596585188897No Hit
CATAGATGGGACAGCGACAATGACAGCAGCAGCTCTGTCTTGCAGCAACT8640.35216003717244837No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC8510.346861332909437No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGGTGCGATGGCTTTCTGACT8160.3325955906628679No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCACTCTCCCACCATTCAGACT7670.3126235515176712No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA7660.31221595888205494No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG7600.30977040306835735No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG7360.2999881798135671No Hit
CATAGATGGGACAGCGACAATGACAGTGCATAAAAACTGTCGGAGGTCTA6900.28123891857521915No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG6840.2787933627615216No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG6810.27757058485467284No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA6270.2555605825313948No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG6190.2522998414464647No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC6140.2502618782683834No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAGGAAATGATTTCCCTTGAA6090.24822391509030217No Hit
CATAGACCCTCTCTTACCCTTCCACCCAGACCATGGAGAGAATAATCCGT6010.2449631740053721No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAAATGAGC5860.23884928447112816No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC5750.23436576547934931No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT5240.21357854106292007No Hit
CATAGATGGGACAGCGACAATGACAGCGACATGGGTCATTGTGAGGATTA5150.20991020734237373No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC5050.20583428098621112No Hit
CATAGATGACATGGGAAATTATGCTGCTACCGTATCACTCTCCCACCATT4970.20257353990128105No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT4960.2021659472656648No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT4950.20175835463004857No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG4850.19768242827388596No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCATTGTGGGTTTTAACT4790.1952368724601884No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT4740.1931989092821071No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG4510.18382427866293313No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG4380.17852557439992173No Hit
CATAGACCTCCCATGGTTCCTGATGATAGACCTCCCATGATTTACCATCA4190.1707813143232128No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTAAAGGCTGGGGTCTT4080.16629779533143396No Hit
CATAGATGGCAAATGGTGGGATCTCTACATAGATGCCTGGCCAACTGTTT3850.15692316471225998No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA3700.1508092751780161No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG3570.1455105709150047No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT3480.14184223719445838No Hit
CATAGAGGCTGCAGTGAACAATGATCGATCCGCTGCACTCCAGGGAAACT3400.1385814961095283No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGTGTCTGCTGGTCTATGTGTA3350.136543532931447No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGACAGTTGTGGAAAGTGCAAT3190.13002205076158682No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA3120.127168902312273No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTTCAGCATCATTTCTATG3050.1243157538629592No Hit
CATAGAACACGAAGATTTCAGATTAGCCTTAGCAGGCCCTTCAGCATCAT3010.12268538332049417No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTACAGTTGTGGAAAGTGCA2970.12105501277802913No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTCTATGTGTACCCTGGGAGAAGAA2940.11983223487118035No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAAATGATG2870.11697908642186654No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA2820.11494112324378523No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGCAGGCCCT2610.10638167789584378No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCACG2600.10597408526022753No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAGGTAATGATTTCCCTTGAA2500.10189815890406491No Hit
CATAGAAATTTTTCAGAGACAGTTGTGGAAAGTGCAATGAGTCTATGTGT2480.1010829736328324No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)