FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806757

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806757
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences153345
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1721611.226971860836676No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT148029.652743812970751No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA78995.151129805340898No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG78095.0924386188007436No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA74854.881150347256187No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA59833.9016596563304966No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG59503.880139554599107No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT35002.2824350321171214No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA30962.0189768169813167No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTAGAACATTAGCTTAGTTAATT28451.8552936189637745No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA27051.7639962176790895No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA26561.73204212722945No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA24541.6003130196615474No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT18781.2246894258045582No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG17171.1196974143271707No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA16931.1040464312497962No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC16541.0786135837490627No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT15621.0186181486191268No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA10780.7029899898920734No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA10090.6579934135446216No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA9600.6260393230949819No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT8570.5588705207212494No Hit
CATAGATCATGGGACTTCAGCATGGCCTGTTCACTCTGATGGTACTTCTA8530.5562620235416871No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT8500.5543056506570152No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT8260.5386546675796406No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT8080.5269164302716097No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA7590.49496233982197No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCGAGGCAGAGGACAGGTATCTATG7560.4930059669372983No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT7520.4903974697577358No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCAGATCCTTGTCAACTCTT6970.4545306335387525No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG6540.42648928885845644No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT6540.42648928885845644No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTCAGTGGTGGAGGGCTTTGCTGT5900.38475333398545764No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG5810.3788842153314422No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTATGTTGCCTTTCCTCAGTTCT5610.36584172943363No Hit
CATAGATGCTTCTGATATGTTGCCGTGTTGCCTTTCCTCAGTTCTTTTTC5210.3397567576380058No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG5110.33323551468909973No Hit
CATAGAATACAACACACTCTCTGCCCTGGTAGAGAACATTAGCTTAGTTA5040.3286706446248655No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCGTCCAGTGAACTCAAGGGGGTC5010.3267142717401937No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTATGTGTACTCGAGGCAGAGGA4800.31301966154749095No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG4790.31236753725260036No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG4790.31236753725260036No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTACAGTGAAACAAGATCGT4750.30975904007303795No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT4720.3078026671883661No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAACAGCTAAAAATCTTGGAGCT4570.298020802765007No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC4550.2967165541752258No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG4120.26867520949492973No Hit
CATAGAACTCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT4100.2673709609051485No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC4060.2647624637255861No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA3820.24911148064821154No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTCTTGTAGAAGGGATGGTCTA3810.24845935635332095No Hit
CATAGATGCTTCTGATATGTTGCCGTAACTTAGCAACCTGTACATTTCGT3640.23737324334018065No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC3630.23672111904529No Hit
CATAGAACAGTAAGTCAGCTCCTCCTGTCTCATAGATCTCCCTCATTATC3580.233460497570837No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA3570.23280837327594642No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA3480.22693925462193093No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG3410.22237438455769667No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCTGGAGACAGCCGCTCAC3280.21389676872411884No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA3170.20672340148032214No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG3040.19824578564674425No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCTGAGAAAGGAGGATCACTCT3010.19628941276207246No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT2900.1891160455182758No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG2880.18781179692849456No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACTACAAGTACCCACCAC2850.18585542404382277No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACAGTGAAACAAGATCGTGCCT2750.1793341810949167No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGACACTTTGGACTCTGCC2620.1708565652613388No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2540.16563957090221396No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTTTAGCCTGTTCACTCTGATGGTA2410.1571619550686361No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG2360.15390133359418304No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCTCTATCCTTGGAGAGAAATGC2120.1382503505168085No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA2100.13694610192702728No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGACATGTGTGAGAGGGAAGGA2090.1362939776321367No Hit
CATAGAAGGAGCTGGACTGGATGGACTATGAGACCAAGTCTCTGCTACAC1990.1297727346832306No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTGGAGACAGCCG1960.1278163617985588No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC1960.1278163617985588No Hit
CATAGAGAATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA1950.1271642375036682No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACATAGAACAGCTAAAAATCTTGG1850.12064299455476213No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTAACCTCAGCAAA1820.11868662167009032No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1770.11542600019563728No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGGCTGAGAAAGGAGGATCACTCT1720.11216537872118426No Hit
CATAGACTCTGTTTTGCTACCTGGGGGGCTGAGAAAGGAGGATCACTCTA1690.11020900583651244No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG1580.10303563859271576No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)