FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806758

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806758
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences153345
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1705911.12458834653885No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT144069.394502592194073No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG76775.006358211875184No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT76304.975708370015325No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA74634.866803612768593No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG59473.878183181714435No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA57883.7744954188268287No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT33682.1963546251915615No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA30291.975284489223646No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACACGGAAGACACAGC29251.907463562555023No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA27081.7659525905637616No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA26541.7307378786396685No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT24291.5840099122892823No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT19081.2442531546512765No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA17281.1268707815709675No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT16271.0610062277870163No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG16211.0570934820176725No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC15731.0257915158629234No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTCTGTTTACTCGGAGATT10300.6716880237373243No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT10180.663862532198637No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT9740.6351690632234503No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT8650.5640875150803742No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT8570.5588705207212494No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT8270.5393067918745313No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC8150.5314813003358441No Hit
CATAGAAGTACCATCAGAGTGAACAGGCCATGCTGAAGTCCCATGATCTA7940.5177866901431413No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA7930.5171345658482507No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT7710.5027878313606573No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG6900.4499657634745182No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGGAGAATGATATTGTTGCAGA6810.4440966448205028No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC6420.41866379731976916No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG6110.3984479441781603No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATAGGAAACATTGGAAAGATGG5690.3710587237927549No Hit
CATAGAAACAGCAAAGCCCTCCACCACTGACAACAATGCCTCACACACAG5680.37040659949786425No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG5480.35736411360005216No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACACGGCAACATATCAGAAGCATC5400.35214711924092734No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA4970.3241057745606313No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT4900.31954090449639705No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCTACCAGGGCAGAGAG4870.3175845316117252No Hit
CATAGAGGCACGATCTTGTTTCACTGTACACTGAAGCAGAGGTAGATGGA4790.31236753725260036No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGCATTCTCTCAGGGCTGTTCT4630.3019335485343506No Hit
CATAGACCCCCTTGAGTTCACTGGACGGTCACTGACAGGTCTTAAAGCTC4620.30128142423946No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT4500.29345593270077275No Hit
CATAGATACCTGTCCTCTGCCTCGAGTACACATAGGAATCTTTGGGAGGC4490.29280380840588216No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC4390.2862825654569761No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAATCTTTGGGAGGCTATTAG4110.26802308520003915No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACGGCAACATATCAGAAGCATCTA3900.2543284750073364No Hit
CATAGACCATCCCTTCTACAAGAGGCAACAATGCCTCACACACAGGTCTA3760.2451987348788679No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA3670.23932961622485247No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG3630.23672111904529No Hit
CATAGACGAAATGTACAGGTTGCTAAGTTACGGCAACATATCAGAAGCAT3630.23672111904529No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA3510.22889562750660278No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCTATGAGACAGGAGGAGCTGA3470.22628713032704031No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA3290.21454889301900942No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA3280.21389676872411884No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC3270.21324464442922822No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTGTTTACTCGGAGATTTGACTG3220.2099840229547752No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG2980.19433303987740064No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA2880.18781179692849456No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCTAGCCAAATTCCTTACCGATCT2870.18715967263360395No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGGCAACATATCAGAAGCAT2830.18455117545404154No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTACGATAGCGAGAAGAGTGGAGGC2690.17542143532557306No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTCATAGGGCACTGAGACCACAT2660.17346506244090124No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCTACGATAGCGAGAAGAGTGGAGG2660.17346506244090124No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTAAACCTTCCACTACCCACCTG2470.1610747008379797No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG2400.15650983077374547No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2400.15650983077374547No Hit
CATAGAGCAGCATTTCTCTCCAAGGATAGAGCAGCATTCTCTCAGGGCTG2110.13759822622191792No Hit
CATAGAGTCCTTCCCTCTCACACATGTCCCTCTAGCCAAATTCCTTACCG2080.1356418533372461No Hit
CATAGAGGTGAGCGGCTGTCTCCACCAAAACTACAAAACTTATCTGGGCA2010.13107698327301184No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTAGGATAATGGCTTCCA1900.12390361602921518No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC1880.12259936743943395No Hit
CATAGACCACACACACAACTGAGAGTGTAGCAGAGACTTGGTCTCATAGT1870.12194724314454335No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA1780.1160781244905279No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCCCCAGGTAGCAAAACAGAGTCT1760.11477387590074668No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC1750.11412175160585608No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTAGGAGGAGCTGACTTAC1730.11281750301607486No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTGAGGTTAATGGCTTCCA1700.11086113013140304No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCCCAGGTAGCAAAACAGAGTCTA1620.10564413577227819No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCTGTCTATGTGTAGAACCATGT1560.10173139000293457No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)