FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806759

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806759
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108704
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG72286.649249337650868No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA64165.902266705916985No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC64035.890307624374448No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG61465.653885781571975No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG51834.767993818074772No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA46354.263872534589344No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT37443.4442154842508095No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT35743.2878274948483956No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA32032.9465337062113632No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG24782.279584927877539No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA23182.1323962319693845No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA21481.976008242566971No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT21141.944730644686488No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT18881.73682661171622No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA18871.7359066823667941No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC17161.5785987636149543No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA13711.2612231380629968No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT12821.179349425964086No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC11261.0358404474536356No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC10840.9972034147777451No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG10520.9677656755961143No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC9880.9088901972328525No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC8640.7948189579040329No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG7980.7341036208419194No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA7720.7101854577568443No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA7510.690866941418899No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGGAGACAGCCGCTCA6450.5933544303797469No Hit
CATAGACCAGCAGACACTCCCATCATACACTGCCCTCTCTGCTGTTCCTT6330.5823152781866353No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT4760.4378863703267589No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG4660.4286870768324993No Hit
CATAGACATTTAATCCTCACAATGACCCATATGGTGGAAGGGTAAGAGAG4630.42592728878422137No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT4610.4240874300853695No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACATGGTTCTACACATAGAGTGTC4550.4185678539888137No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA4520.4158080659405357No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC4450.40936856049455406No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGATGCTGAAGTGATGGGCTAGATC4230.3891301148071828No Hit
CATAGAAAGGTGCAATCAAGCCAGTTACACTGACGATCATTGTTCACTGC3980.3661318810715337No Hit
CATAGACAGTGCCTTTGTGCGTGTTACACTGACGCTATACCACACTACAC3860.35509272887842214No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGCTATACCACACTACA3790.3486532234324404No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT3750.34497350603473653No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC3670.3376140712393288No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT3630.33393435384162495No Hit
CATAGAAAAAACAGTTGGCCAGGCATCCCACGCTGTCCTTCTCTGAATCT3560.3274948483956432No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT3530.3247350603473653No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG3520.32381513099793935No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG3510.3228952016485134No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA3420.3146158375036797No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGGTTCTACACATAGAGTGTCT3310.3044966146599941No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA3190.29345746246688253No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT3180.29253753311745656No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGCTATACCACACTA3170.29161760376803064No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT3070.282418310273771No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGTCATCAGGAACCATGGGA2970.2732190167795113No Hit
CATAGATGTTTTATCAAAGGCATGCTCATAGAAATGATGCTGAAGTGATG2920.2686193700323815No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGACGCTATACCACAC2800.25758021783926993No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2770.254820429790992No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGCTATACCACACTA2730.2511407123932882No Hit
CATAGAGTGCCTGTTTCCTCATTCGTTCTACACATAGAGTGTCTGTTTCC2590.23826170150132467No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGTCATTGTCGCTGTCCCATC2540.23366205475419485No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC2520.23182219605534293No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGACGCTATACCACACTAC2210.20330438622313804No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTAGAGACCT2200.20238445687371212No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG2130.19594495142773033No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC2080.19134530468060054No Hit
CATAGACATTTAATCCTCACAATGACCCATGTGTAGAACTGAGGAGCTGA2050.18858551663232262No Hit
CATAGAAATGATGCTGAAGGGCCTGCTCTACACATAGAAATGATGCTGAA1970.18122608183691494No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGCCCTCTCTGCT1940.17846629378863704No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT1890.17386664704150723No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG1800.16558728289667354No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG1700.1563879894024139No Hit
CATAGAAATGATGCTGAAGGGCCTGCGACATGGTTCTACACATAGAAATG1700.1563879894024139No Hit
CATAGAGTCCAACTATTCCAGCACCAGTCCCAACTGTCTCTGAAAAATTT1680.15454813070356196No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGGCTCAGGTATGTCTTTAT1640.1508684133058581No Hit
CATAGAAATGATGCTGAAGGGCCTGGTTCTACACATAGAAATGATGCTGA1620.14902855460700618No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA1620.14902855460700618No Hit
CATAGACGGATTATTCTCTCCATGGTCTCAAACTGCTGGGGTTGCTCTAT1620.14902855460700618No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCATAGAGCAGCATAATTT1580.14534883720930233No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACGACATGGCTCAGGTATGTCT1580.14534883720930233No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGACGACATGGTTCTACACATAGA1440.13246982631733883No Hit
CATAGACCCAAGACCCCAGCCTTTACACTGACGACATGGTTCTACACATA1390.12787017957020902No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACGATGTTCTTCCTTTTCT1380.12695025022078305No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTTCTACACATAGAGTGTCTGTTT1380.12695025022078305No Hit
CATAGAAATGATGCTGAAGGGCCTGCATGGTTCTACACATAGAAATGATG1380.12695025022078305No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTCACTGACGACATGTTCTACA1360.1251103915219311No Hit
CATAGAGCTTGGGTGCGAACATCAACCCACCCACAGCCAGGAAAGAATCT1350.12419046217250515No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA1310.1205107447748013No Hit
CATAGAAATGATGCTGAAGGGCCTGCATGATGCTGAAGTGATGGGCTAGA1230.1131513099793936No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGTCCCAACTGTCTCTGA1220.11223138062996761No Hit
CATAGAAATGATGCTGAAGGGCCTGCGACGACATGGTTCTACACATAGAA1190.10947159258168973No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA1190.10947159258168973No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAGTCCCAACTGTCTCT1170.1076317338828378No Hit
CATAGAAATGATGCTGAAGGGCCTGCCACTGACGACATGGTTCTACACAT1110.10211215778628202No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAATGGTGGAAGGGTAAGAGAGGGT1100.10119222843685606No Hit
CATAGAAATGATGCTGAAGGGCCTGCCACATAGAAATGATGCTGAAGTGA1090.1002722990874301No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)