FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806760

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806760
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences108704
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG71876.611532234324404No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG63925.880188401530762No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT63825.870989108036503No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG60415.557293199882249No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG51744.759714453929939No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC46154.245473947600824No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT37013.4046585222254935No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT35243.241831027377098No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA31892.9336546953193996No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG24602.2630261995878715No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT23242.1379158080659404No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA21471.9750883132175447No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG19551.79846187812776No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT18701.7202678834265528No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA18601.7110685899322933No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC17311.592397703856344No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT14841.3651751545481308No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT13481.2400647630261996No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT12671.1655504857226966No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC11401.048719458345599No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG10870.9999632028260229No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC10610.9760450397409479No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC9620.8849720341477775No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGCATGCCTTTGATAAAACATC8660.7966588166028848No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG7960.7322637621430674No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT7760.7138651751545482No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG7480.6881071533706211No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT7370.6779879305269356No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGTCTGAGAAAAGATGCAGTACA6390.587834854283191No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTATGATGGGAGTGTCTGCTGGT6330.5823152781866353No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG5090.4682440388578157No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT4630.42592728878422137No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG4600.4231675007359435No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT4590.42224757138651753No Hit
CATAGACCCTCTCTTACCCTTCCACCATATGGGTCATTGTGAGGATTAAA4520.4158080659405357No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG4460.41028848984398003No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC4420.4066087724462761No Hit
CATAGATCTAGCCCATCACTTCAGCATCACGAATGAGGAAACAGGCACTC4190.38545039740947895No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAACTGGCTTGATTGCA4070.37441124521636737No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG3810.3504930821312923No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAACACGCACAAAGGCAC3760.3458934353841625No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC3640.3348542831910509No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG3550.32657491904621727No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGTGGGTTGAGGGAGTC3540.3256549896967913No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA3520.32381513099793935No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG3510.3228952016485134No Hit
CATAGATTCAGAGAAGGACAGCGTGGGATGCCTGGCCAACTGTTTTTTCT3480.3201354136002355No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG3370.3100161907565499No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCAGG3210.2952973211657345No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA3170.29161760376803064No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT3100.2851780983220488No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCTGGGAGAAGAAATGTT3080.28333823962319693No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGTCCTAAATGTCTTT3080.28333823962319693No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGAGCATGCCTTTGA2990.2750588754783633No Hit
CATAGACCTCCCATGGTTCCTGATGACTCCCATGATTTACCATCACAAAT2890.26585958198410364No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACGAAT2680.24654106564615838No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTTGTTACAAAAATTGGGA2640.2428613482484545No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGGGTCATTGTGAGGA2590.23826170150132467No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG2520.23182219605534293No Hit
CATAGATGGGACAGCGACAATGACAGTGTGGTGCTGGAATAGTTGGACTC2490.22906240800706504No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTAGATCTC2410.22170297321165736No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTTACAAAAATTGGGAA2210.20330438622313804No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG2070.19042537533117457No Hit
CATAGACCCCATGACTCAGCTCCTCAGTTCTACACATGGGTCATTGTGAG2010.18490579923461878No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAGCAGGCC1980.18214601118634088No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG1970.18122608183691494No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGACTGTTAATATAGAAGAGAC1960.18030615248748896No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT1830.1683470709449514No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC1790.16466735354724757No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG1690.1554680600529879No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCATGGAGAGAATAATCCGTCTAT1620.14902855460700618No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGGTGGGTTGAGGGAGT1600.14718869590815425No Hit
CATAGATGACATGGGAAATTATGCTGCTCTATGACTGTTAATATAGAAGA1590.14626876655872828No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCAGGC1540.14166911981159847No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTGGTGCTGGAATAGTTGGACT1540.14166911981159847No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT1530.1407491904621725No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTACCCTGGGAGAAGA1500.1379894024138946No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGC1500.1379894024138946No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACACGA1370.1260303208713571No Hit
CATAGATGAAGGCAGAAAAGGAAGAACATCGTTATAGAAAACAAGGAGAA1360.1251103915219311No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGATGTTCGCACCCAAGCTCT1350.12419046217250515No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC1300.11959081542537534No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACATGTCGTCAGTGA1290.11867088607594937No Hit
CATAGATCTAGCCCATCACTTCAGCATCATGCAGGCCCTTCAGCATCATT1290.11867088607594937No Hit
CATAGAACTTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG1240.11407123932881955No Hit
CATAGATGGGACAGCGACAATGACAGTGCATAAAAACTGTCGGAGGTCTA1200.11039152193111569No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCACTCTCCCACCATTCAGACT1120.10303208713570797No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGAGACAGTTGTGGAAAGTGC1100.10119222843685606No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACTCAGAGACAGTTGTGGAAAGT1090.1002722990874301No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)