FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806761

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806761
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84304
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1018612.082463465553236No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA39884.730499145947998No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG32573.8633991269690644No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA30553.623790092996774No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA24892.952410324539761No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT22722.6950085405200226No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG17652.093613588916303No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT16952.0105807553615485No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG15481.8362118048965648No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC13121.5562725374833934No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA12351.4649364205731639No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC11431.3558075536154868No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA11301.3403871702410324No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT11071.3131049535016133No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG10881.29056747010818No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA10211.211093186562915No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC10081.1956728031884607No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT9961.1814386031505029No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA8771.0402827861074209No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA7950.9430157525147087No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT7810.9264091858037579No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT7760.9204782691212754No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT6680.7923704687796546No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA6500.7710191687227178No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT6480.7686468020497248No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG6000.7117100018978934No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT5880.6974758018599355No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA5530.6559593850825584No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAGCAAACTAACACAGAAA5500.6524008350730689No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG5370.6369804516986145No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAGCAAACTAACACAGAAAC4900.5812298348832795No Hit
CATAGACCCCATGTGCAGTGTAAGCTATAGACCAAAGCTAGAAACTCCCA4330.5136173847029797No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT4270.5065002846840008No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA4060.48159043461757445No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3760.4460049345226798No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA3720.4412602011766939No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA3630.43058455114822547No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3590.42583981780223956No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA3420.40567470108179915No Hit
CATAGACTCTGTTTTGCTACCTGGGGTAGACATGTGTGAGAGGGAAGGAC3360.39855760106282023No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACATTAGCTTAGTTAATTAG3340.3961852343898273No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGAGACCAAGTCTCTGC3310.3926266843803378No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC3200.37957866767887644No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGTCCAGTGAACTCAAGGGGG3160.37483393433289053No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG2940.34873790092996776No Hit
CATAGACTCTGTTTTGCTACCTGGGGGTTGGTGGAGGGCTTTGCTGTTTC2740.32501423420003794No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA2540.3012905674701082No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT2540.3012905674701082No Hit
CATAGAATACAACACACTCTCTGCCCTGTACGGTAACAGTGAAACAAGAT2530.3001043841336117No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTAGAGAACAGCTAAAAATCTTG2470.29298728411463276No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTCATAGACCAAAGCTAGAAACT2470.29298728411463276No Hit
CATAGAAGTGACCCTCAGCTCAGTGACAGTGAAACAAGATCGTGCCTCTA2440.2894287341051433No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTACATAGACCAAAGCTAGAAAC2430.2882425507686468No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATGCAAACTAACACA2350.27875308407667493No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2270.26926361738470295No Hit
CATAGACCTGTGTGTGAGGCATTGTTTCAGGGTGGGGAAAGAGAGCACTC2260.2680774340482065No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA2240.2657050673752135No Hit
CATAGATGTGCCACATACCTTTCCCAGGGTAATGGAGGAGTATGGGATCT2140.2538432340102486No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2120.25147086733725565No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2090.2479123173277662No Hit
CATAGAGAACAGCTAAAAATCTTGGAGCTCTATGAGACCAAGTCTCTGCT2070.24553995065477321No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2060.24435376731827674No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACAGTGAAACAAGATCGTGCCTCT2050.24316758398178023No Hit
CATAGATGTGGTCTCAGTGCCCTATGTGTAGAGAACATTAGCTTAGTTAA1990.2360504839628013No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTACTCTCAGTTGTGTGTGT1930.22893338394382234No Hit
CATAGACCACCGTGCCCAGATAAGTTGCCTTTCCTCAGTTCTTTTTCTAT1910.2265610172708294No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGGTCTCATTGGGGATGGCTG1810.2146991839058645No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTATGAGACCAAGTCTC1790.21232681723287153No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCGGTCATTCTTCTCTGGGGGCTC1750.20758208388688554No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA1750.20758208388688554No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTACACATAGAACAGCTA1710.20283735054089957No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA1690.20046498386790662No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACATGGTGGAGGG1680.19927880053141012No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACGACATGGTTCTACACATAGAAC1660.19690643385841716No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC1650.19572025052192066No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1630.1933478838489277No Hit
CATAGAATACAACACACTCTCTGCCCTGTGAGTCTGCTGAGATTGGCCTG1620.1921617005124312No Hit
CATAGAATACAACACACTCTCTGCCCTGTGCCTCTTGTAGAAGGGATGGT1580.18741696716644526No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1510.17911368381096981No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAACAGCTAAAAATCTTGGAGCT1460.17318276712848737No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT1410.16725185044600493No Hit
CATAGATGTGGTCTCAGTGCCCTATGAGACCAAGACAGTGAAACAAGATC1390.16487948377301195No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGTCCAGTGAACTCAAGGG1270.1506452837350541No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCAGGGCTGTTCTCACAGTGA1260.1494591003985576No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG1250.1482729170620611No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1250.1482729170620611No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1220.14471436705257165No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACTGACGACATGGTTCTACACA1210.14352818371607515No Hit
CATAGAGAACAGCCCTGAGAGAATGCTACCGTAGCAAACTAACACAGAAA1170.1387834503700892No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAAGGGTAATGGAGGAGTA1130.13403871702410325No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCACTGACGACATGTGTGAGAGG1110.13166635035111027No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1110.13166635035111027No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1110.13166635035111027No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCATAGAACAGCTAAA1040.12336306699563485No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA950.11268741696716644No Hit
CATAGAGCCTCCACTCTTCTCGCTATCCCTGTGCCTCTTGTAGAAGGGAT940.11150123363066995No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA930.11031505029417348No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG920.10912886695767698No Hit
CATAGAGAACAGCCCTGAGAGAATGCCACATAGAGAACAGCTAAAAATCT860.10201176693869804No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA850.10082558360220155No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)