FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806774

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806774
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54416
Sequences flagged as poor quality0
Sequence length150
%GC47

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1942835.70273448985593No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT22184.076007056748016No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG21363.925316083504851No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG10551.9387680094089972No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG10261.8854748603351956No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC8191.5050720376359894No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA8081.4848573948838577No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT5861.0768891502499265No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA5461.003381358423993No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT5130.9427374301675978No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG4750.8729050279329609No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT4500.8269626580417524No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG4280.7865333725374889No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT4170.7663187297853573No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCAGTGTACTATGGCTTA3890.7148632755072037No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT3540.6505439576595119No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT3120.5733607762422817No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG3100.569685386650985No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA3050.5604969126727433No Hit
CATAGACACAACGTTTGAGACTGCCTGGGAGACATCTATGTGTAGAACCA2970.5457953543075567No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA2800.5145545427815349No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG2560.4704498676859747No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT2500.4594236989120847No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA2300.4226698029991179No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC2100.3859159070861511No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG2030.37305204351661275No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC1950.35835048515142603No Hit
CATAGATAGCAGCAATCTCAGGCCTCTGCACCACTGCCCCACATCTCCTC1910.35099970596883273No Hit
CATAGATCCCTGGCAAGAATTCCTCAGTGTAGAAGCTTTGAGATTTGTGT1770.32527197882975595No Hit
CATAGAGCCATCATCATTTCTCACCCAGTATGCAGTCTGTGAGCTGTCTA1730.3179211996471626No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC1640.30138194648632755No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCCTCATAGAGAAGCTTTGAG1460.26830344016465746No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTTCCTCCGATGCTTATTACA1450.26646574536900913No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT1400.25727727139076745No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC1370.2517641870038224No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAATTACATAGACCCTTAGG1250.22971184945604234No Hit
CATAGACGGGAAGAGTAAGACCACCCCAGCTCCACAGGGACAGAGGCTCT1220.22419876506909733No Hit
CATAGATCTCAAACAGCCTCTCCCAGTGGTCTCATAGAGGCAAGGGTACT1200.22052337547780065No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAAGGGAGAATCTATGTGTA1190.21868568068215233No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTACCAAAAGCACAAGGGAGA1110.2039841223169656No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGAAGACTGATGCTACCCGATTGC1060.19479564833872393No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1060.19479564833872393No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA1050.19295795354307554No Hit
CATAGAACAATCAGGCACCCACCATGCGTCAGTGTAGTATGCAGTCTGTG1030.1892825639517789No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG1010.1856071743604822No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA990.18193178476918553No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG940.17274331079094382No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA940.17274331079094382No Hit
CATAGATCCAGCTTCATCCATGTCCCTACAAAGGACATGAGCTCATCATT930.1709056159952955No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG930.1709056159952955No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGTGTGTGCCATACCAAGAATAAGA890.16355483681270214No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA880.1617171420170538No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA870.15987944722140546No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA840.15436636283446045No Hit
CATAGACTCACTCTGTCACCCAAGCTGGGCGTGGTGGCTCATGCCTGGAA810.14885327844751545No Hit
CATAGATCCCTGGCAAGAATTCCTCATGGTGGGAGTATACTGATAGCTCT800.14701558365186712No Hit
CATAGAGGGCTATCCTTGCTCAGATCATGGTGGGAGTATACTGATAGCTC780.14334019406057041No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG760.13966480446927373No Hit
CATAGAGAAGCTTTGAGATTTGTGTCTGTTCTATGTGTAGAACCATGTCG750.1378271096736254No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT750.1378271096736254No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA710.13047633049103205No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA690.12680094089973537No Hit
CATAGAGATCTTCTCGGCTTAGCGGCTGTCTCCACAAGTCCGCGCAGAGC650.11945016171714203No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA640.11761246692149367No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGAAAGTTGGAACCTATCAGTGTCTA630.11577477212584533No Hit
CATAGATAGCAGCAATCTCAGGCCTCCAAACTTGGACTGAAATCTGTACC630.11577477212584533No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA610.11209938253454867No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG600.11026168773890033No Hit
CATAGATGCCAAGAAGAGAAAAGCAGGAAAGTTGGAACCTATCAGTGTCT600.11026168773890033No Hit
CATAGATCTAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT600.11026168773890033No Hit
AATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA580.10658629814760363No Hit
CATAGATAGCAGCAATCTCAGGCCTCGTCCCCTGCCTGCTTCCCTCCGCA580.10658629814760363No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGC560.10291090855630697No Hit
CATAGACTCACTCTGTCACCCAAGCTGGGAATGCAGTGGTGCAATCATAA550.10107321376065864No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA550.10107321376065864No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGTTGTGACACCGAAAAA550.10107321376065864No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA550.10107321376065864No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)