FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806781

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806781
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences138969
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1587411.422691391605323No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG85986.186991343393131No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC74225.340759449949269No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG69014.96585569443545No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG55684.006648964877059No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA49593.5684217343436306No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG44803.223740546452806No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA37562.7027610474278436No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT29002.0867963358734682No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA26931.937842252588707No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT26171.8831537968899539No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC22421.6133094431132124No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA21741.5643776669616964No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA20101.4463657362433349No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT19891.4312544524318374No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA19371.3938360353747958No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC19151.3780051666198936No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT17161.2348077628823695No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC15831.1391029654095517No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA14061.0117364304269298No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG12720.9153120480107074No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG12240.8807719707272845No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA9650.6943994703854817No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT8870.6382718447999194No Hit
CATAGACATTTAATCCTCACAATGACCCATTGCTTCTTGTGGTAACTGGT8180.5886204837049989No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA7470.5375299527232692No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA7000.5037094603832509No Hit
CATAGACAGTGCCTTTGTGCGTGTTATACGGTGGAAGGGTAAGAGAGGGT6920.49795278083601374No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG6880.49507444106239523No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGTCATTGTCGCTGTCCCAT6760.4864394217415395No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGATCATTGTTCACTGC5970.42959221121257263No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACTGACGCTATACCACACTAC5950.4281530413257633No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG5890.42383553166533544No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACCTGACGCTATACCACACTA5870.42239636177852613No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT5840.42023760694831225No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG5230.3763429254006289No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC5190.37346458562701035No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGAGCAGCATAATTTCCCATGTCAT5110.3677079060797732No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC5040.36267081147594066No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG4950.3561945469852989No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA4520.3252523944188992No Hit
CATAGACGGATTATTCTCTCCATGGTCTGAGGAGAATTCAAGCTGCTCTA4400.31661737509804344No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGCTATACCACACTA4350.3130194503810202No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGTGCTGAAGTGATGGGCTAGA4160.299347336456332No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4150.2986277515129273No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC4100.2950298267959041No Hit
CATAGACCAGCAGACACTCCCATCATTTGCAGAGATCCCACCATTTGCCA4080.2935906569090948No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT3770.27128352366355085No Hit
CATAGACCAGCAGACACTCCCATCATGGCTCAGGTATGTCTTTATTAGCT3620.2604897495124812No Hit
CATAGAAAAAACAGTTGGCCAGGCATGCAGAAGTAGGAAGTATTACCCCT3510.25257431513503015No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTACGATCATTGTTCACTGC3500.25185473019162546No Hit
CATAGATCCACGTGAGAATAAAGCATACACTGGCTCAGGTATGTCTTTAT3450.24825680547460224No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA3410.24537846570098368No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT3400.244658880757579No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT3390.24393929581417437No Hit
CATAGACCAGCAGACACTCCCATCATTGCCACACCCACAGCCAGGAAAGA3350.2410609560405558No Hit
CATAGACCGCTTCCCAATTTTTGTAACACCCACAGCCAGGAAAGAATCTA3200.23026718188948614No Hit
CATAGACCAGCAGACACTCCCATCATACACTGCCCTCTCTGCTGTTCCTT3180.22882801200267686No Hit
CATAGACCAGCAGACACTCCCATCATGACATGGTTCTACACATAGACCAG3110.22379091739884435No Hit
CATAGAGAAGACTCCCTCAACCCACCCTGACGCTATACCACACTACACAC3090.22235174751203507No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG3030.2180342378516072No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGCCCTCTCTGCT2980.21443631313458397No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGACGATCATTGTTCACT2940.21155797336096538No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2930.21083838841756075No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGCAGCATAATTTCCCAT2880.20724046370053756No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGCTCAGGTATGTCTTTATTAGCT2860.20580129381372825No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA2660.19140959494563536No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT2630.18925084011542143No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGTCATTGTCGCTGTCC2600.1870920852852075No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2390.17198080147370998No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACGCTATACCACA2260.1626261972094496No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2220.159747857435831No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTATCATCAGGAACCATGGG2100.15111283811497528No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCTGTTTCCCCACTCAAAT2060.14823449834135669No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC2030.14607574351114277No Hit
AAGGATTCTGGGCCATCTATGAGACCAAGTCTCTGCTACCGTAACTCAGT1970.1417582338507149No Hit
CATAGAAATGATGCTGAAGGGCCTGCCATTGCTTCTTGTGGTAACTGGTC1890.13600155430347774No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTACACTGTCATTGTCGCTGTCCC1790.12880570486943133No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGGTTCTACACATAGAGTGTCTGTT1760.1266469500392174No Hit
CATAGAAATGATGCTGAAGGGCCTGCGAAATGATGCTGAAGTGATGGGCT1740.1252077801524081No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG1720.12376861026559881No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCTCCCAAGTATTAGAGCA1720.12376861026559881No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGACATGGTTCTACACAT1710.12304902532219415No Hit
CATAGACAGTGCCTTTGTGCGTGTTACACTGACGACATGGTTCTACACAT1690.12160985543538487No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCACACTGACGACATGGCTCAGGT1650.11873151566176629No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT1620.11657276083155237No Hit
CATAGAAAAAACAGTTGGCCAGGCATACACTGACGACATGTTCTACACAT1610.11585317588814771No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTTTTTGTCATGCCCTACTT1580.11369442105793379No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA1530.11009649634091057No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA1520.10937691139750592No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCGTCCCAACTGTCTCTGAA1500.10793774151069663No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTCCCAAGTATTAGAGCAAGTT1490.10721815656729199No Hit
CATAGAAATGATGCTGAAGGGCCTGCAATGATGCTGAAGTGATGGGCTAG1480.10649857162388734No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG1400.10074189207665019No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)