FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806782

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806782
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences138969
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1565511.265102288999705No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG84786.100641150184574No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG73095.259446351344545No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG66244.766530665112363No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG55073.9627542833293754No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC48883.517331203361901No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG43873.1568191467161744No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA37012.663183875540588No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT28262.0335470500615247No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT26191.8845929667767631No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT25811.8572487389273866No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC22371.609711518396189No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT21511.5478272132633897No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA20231.4557203405075951No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC19101.3744072419028703No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA18951.3636134677518008No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG18701.3456238441666846No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT16681.2002676855989465No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC15511.1160762472206032No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT13720.9872705423511717No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG12470.8973224244255913No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG11890.855586497708122No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT9450.6800077715173888No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT8640.6217213911016126No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT8610.6195626362713986No Hit
CATAGACCAGTTACCACAAGAAGCAATGGGTCATTGTGAGGATTAAATGT7920.5699112751764782No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT7330.5274557635156042No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC6800.489317761515158No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGTGCTCGTATCTTGG6780.48787859162834873No Hit
CATAGACCCTCTCTTACCCTTCCACCGTATAACACGCACAAAGGCACTGT6700.4821219120811116No Hit
CATAGATGGGACAGCGACAATGACAGTGTAGCCCGTTCTCTCTGTTGTGT6530.46988896804323266No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTAGCCCGTTCTCTCTGT5990.4310313810993819No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG5740.41304175751426575No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGGTATGAGCATGCCTTTGATA5720.4116025876274565No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT5720.4116025876274565No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGGGGTCCTAAATGTCTTTG5700.41016341774064724No Hit
CATAGATGACATGGGAAATTATGCTGCTCACGAATGAGGAAACAGGCACT5120.36842749102317784No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGTGGGTTGAGGGAGT5050.36339039641934534No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG4970.35763371687210815No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACGAATGAGGAAACAGGCACTC4910.3533162072116803No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG4810.34612035777763384No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG4660.3353265836265642No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT4540.32669156430570845No Hit
CATAGAGCAGCTTGAATTCTCCTCAGACCATGGAGAGAATAATCCGTCTA4410.31733696004144807No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGTCCTAAATGTCTTT4290.30870194072059237No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGGTCCTAAATGTCTTTGTCCT4120.29646899668271337No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG4070.2928710719656902No Hit
CATAGATGGCAAATGGTGGGATCTCTGCAAATGATGGGAGTGTCTGCTGG3990.287114392418453No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3920.2820772978146205No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT3770.27128352366355085No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGATGGGAGTGTCTGCTGGT3580.25761140973886265No Hit
CATAGAGGCTGCAGTGAACAATGATCGTACGGTAGCAGGCCCTTCAGCAT3550.2554526549086487No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATGCCTGGCCAACTGTTTTTT3510.25257431513503015No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTATGCTTTATTCTCACG3390.24393929581417437No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGCTGGAATAGTTGGACTCTATGT3360.24178054098396043No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT3310.23818261626693724No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG3260.234584691549914No Hit
CATAGATGGCAAATGGTGGGATCTCTGCTGGTCTATGTGTAGAACCATGT3120.22451050234224898No Hit
CATAGATTCTTTCCTGGCTGTGGGTGTTACAAAAATTGGGAAGCGGTCTA3090.22235174751203507No Hit
CATAGATTCTTTCCTGGCTGTGGGTGTGGCAATGATGGGAGTGTCTGCTG3080.22163216256863041No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTATGATGGGAGTGTCTGCTGGT3060.22019299268182113No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG2970.21371672819117932No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGGGTGGGTTGAGGGAGTCTTC2930.21083838841756075No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGACTGTTAATATAGAAGAGAC2920.21011880347415612No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCCTGGCCAACTGTTTTTT2900.2086796335873468No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG2850.20508170887032362No Hit
CATAGATGACATGGGAAATTATGCTGCTACACTGTCATTGTGGGTTTTAA2800.20148378415330037No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTTGTTACAAAAATTGGG2770.19932502932308643No Hit
CATAGATGGGACAGCGACAATGACAGTGTATGAGCATGCCTTTGATAAAA2600.1870920852852075No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC2600.1870920852852075No Hit
CATAGAACATTGATTCCTGGCATGTCCTTCTATGTGTAGAACCATGTCGT2310.16622412192647282No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCGTCAGTGTACCCTGGGAGAAGA2240.16118702732264029No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC2230.16046744237923566No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCATGTCGTCAGTGTAGATCTC2090.15039325317157062No Hit
CATAGACCTCCCATGGTTCCTGATGATACGGTAGCAGGCCCTTCAGCATC2010.14463657362433346No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACTGTTAATATAGAAGAGACAC2000.14391698868092884No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA2000.14391698868092884No Hit
CATAGACCAGTTACCACAAGAAGCAATGGCAGGCCCTTCAGCATCATTTC1920.13816030913369168No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG1830.1316840446430499No Hit
CATAGATGGGACAGCGACAATGACAGTGTACTTGGAGGCTGGAGAAAAAG1770.12736653498262202No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGAAGAAATGTTGGTCTATGTG1770.12736653498262202No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCGCAGGCCCTTCAGCATC1730.12448819520900344No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCACG1710.12304902532219415No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGACACTGTCATTGTGGGTTTT1690.12160985543538487No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG1670.12017068554857559No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT1640.11801193071836165No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTGCATTAGG1590.11441400600133843No Hit
CATAGAAGGAAGTAGGGCATGACAAAAACACTGTCATTGTGGGTTTTAAC1570.11297483611452915No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACATGTCGTCAGTGT1570.11297483611452915No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA1500.10793774151069663No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTGCAGGCCCTTCAGCATCAT1490.10721815656729199No Hit
CATAGAACAACTTGCTCTAATACTTGGGAGACCCTGGGAGAAGAAATGTT1460.10505940173707806No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACGAGACAGTTGTGGAAAGTGCA1400.10074189207665019No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)