FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806783

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806783
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84528
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG3058536.18327654741624No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG42254.9983437440848No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG28193.3349895892485333No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCACAGC26323.1137611205754303No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT21102.4962142721938294No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA16341.9330872610259322No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGCCATCACAGTTCATTG16261.9236229415105055No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA15271.8065019875070982No Hit
CATAGATCCACAAAGACCAAGAGTGTCTCTGACTGTGTTAATTTAAAAGA15221.8005867878099564No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT11101.3131743327654741No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG10491.2410088964603445No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT7890.9334185122089722No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA7880.9322354722695438No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAGTAATAGCACTTT6650.7867215597198561No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACATGATGAGGGTATAAGGTC6620.7831724399015711No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT5720.6766988453530192No Hit
CATAGACACATGTAGGATGGGGTGGCTTCCCTTACACCTTCTGCCATGAT4970.5879708498958924No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCACAGCACTTT4210.4980598144993375No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTATAATTCCAGC4130.48859549498391064No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTGTAATCCCAGCACTTT4090.48386333522619723No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA4060.4803142154079122No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT3650.4318095778913496No Hit
CATAGACACATGTAGGATGGGGTGGCCTCTCCTTCACTTTCTGCCATGAT3590.42471133825477947No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACGCCTGTAATCCCAGC3310.3915862199507856No Hit
CATAGAACCAAAAATGGCTAGGCATGTGGCTCACACCTGTAATCACAGCA3240.3833049403747871No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACCTGTAATCACAGC3120.3691084611016468No Hit
CATAGACTTCAGCCCTCACAAGCCTTACACTGCCATCACAGTTCATTGTA2960.3501798220707931No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTCCATGTGTGTGCG2900.343081582434223No Hit
CATAGACTTCAGCCCTCACAAGCCTTACTCAGACAGGATGCGCAGATGGT2840.33598334279765285No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2830.3348003028582245No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCCAGC2620.30995646413022904No Hit
CATAGACACATGTAGGATGGGGTGGCTCACACCTATTATCCTAGCACTTT2590.30640734431194394No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCAAAGA2550.3016751845542306No Hit
CATAGAAAATAATGTGGCCGGGCATGGTAGCTCATGCCTGTAATCCCAGT2370.2803804656445202No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG2290.2709161461290933No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTTCACTCCTGTAATCCCAGC2240.26500094643195155No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT2230.2638179064925232No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG2210.2614518266136665No Hit
CATAGACACATGTAGGATGGGGTGGCTCACGTGTGTAATCTCAGCACTTT2040.24134014764338446No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGGCATTGCTCTTGACATCTCTAT2030.2401571077039561No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTATTTTGTCAAAGA1990.23542494794624264No Hit
CATAGAACCAAAAATGGCTAGGCATGGTGGCTCACACCTGTAATCACAGC1910.22596062843081582No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAAGAGTGTCTCTGACTGTGTTA1880.22241150861253076No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAACCCTAGCACTTT1800.21294718909710392No Hit
CATAGAAGCATGGAAGACAAACAGCATGGCGGTGTTTGCAGATTTGGACC1790.21176414915767558No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATCACAGTTCATTGTA1740.20584894946053378No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1690.199933749763392No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGATGTTCCATGTGTGTGCGATGTT1670.1975676698845353No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCTTTGTCAGAAA1640.19401855006625024No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA1590.18810335036910847No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT1550.18337119061139504No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCATCACA1520.17982207079310997No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG1490.1762729509748249No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTATAATTCCAGC1480.17508991103539656No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG1430.1691747113382548No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1260.14906303236797275No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGACTTGGACCTGCG1220.14433087261025931No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG1210.14314783267083098No Hit
AATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1200.1419647927314026No Hit
CATAGATCATGGGACTTCAGCATGGCGATGTTTGCAGATTTGGACCTGCG1180.13959871285254588No Hit
CATAGAAAGTCTGGACCAAGTGCCTCAGTGTGGAGGATGATCAATGCTGC1150.13604959303426084No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCATGCCTGTAATCCCAGC1150.13604959303426084No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGTGTGTGCCTGTAGTCCCAGC1150.13604959303426084No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG1140.13486655309483248No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCCAGCACTTT1130.13368351315540414No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC1120.13250047321597577No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA1120.13250047321597577No Hit
CATAGAACCAAAAATGGCTAGGCATGTCTATGAGACCAAGTCTCTGACTG1100.13013439333711907No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCCTGTAATCCTAACACTTT990.11712095400340716No Hit
CATAGAACCAAAAATGGCTAGGCATGTTGGCTCACACTTGTAATCCTAGC990.11712095400340716No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATACCAGC970.11475487412455045No Hit
CATAGAGGTGTCCTTTCCCCACTTTATGTTTTTGTTTGCGTTGTCAAAGA940.11120575430626538No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGACTCATGCCTGTAATCCCAGC940.11120575430626538No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG930.11002271436683703No Hit
CATAGACACATGTAGGATGGGGTGGCTCATGCGTGTCATCCCAGCCCTTT930.11002271436683703No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG920.10883967442740868No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACTTGTAATCCTAGC920.10883967442740868No Hit
CATAGATCCACAAAGACCAAGAGTGTCAGTGTTGGAGGATGATCAATGCT910.10765663448798031No Hit
CATAGACACATGTAGGATGGGGTGGCTCGCACCTGTAATCCCAGTGCTTT900.10647359454855196No Hit
CATAGAAAATAATGTGGCCGGGCATGGTGGCTCACACCTGTAATCCAAGC870.10292447473026689No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGTACCTGCG860.10174143479083854No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)