FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806784

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806784
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84528
Sequences flagged as poor quality0
Sequence length150
%GC45

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3090236.55830020821503No Hit
CATAGATTGCACATAAAGTCTGATCCCATCTCAAGTCTCACTCTTCTATG42855.069326140450501No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGTGATTACAGGTG39564.680106000378573No Hit
CATAGAGCCTGGCATTTGAGGTAAGGCTTGTGAGGGCTGAAGTCTATGTG27903.3006814310051107No Hit
CATAGACTACCACTACCCAGCACAGGAGCACCCTCTATGTGTAGAACCAT25753.0463278440280144No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACCCCATCCTACATGTGTCTA16441.9449176604202159No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAGGGATAGTTTGAGGGT15921.883399583569941No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACACTCTTGGTCTTTG15411.8230645466590953No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCCATCCTACATGTGTCTATGT15291.8088680673859552No Hit
CATAGACTACCACTACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT11211.326187772099186No Hit
CATAGATCCCAGGCTTTAGAAAATATACCATGTCGTCAGTGTACTCCTAT8751.0351599469998107No Hit
CATAGAGATGTCAAGAGCAATGCCCGGCCACATTATTTTCTATGTGTAGA7970.942882831724399No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGTG7850.9286863524512587No Hit
CATAGACTACCACCACCCAGTACAGGAGCACCCTCTATGTGTAGAACCAT7810.9239541926935454No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTATTACTACAGGTG6770.8009180389929964No Hit
CATAGATGACATAGACCTTATACCCTCATCATGTAGGATGGGTTTTTGCC6550.7748911603255726No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAGAGTGCTGGAATTATAGGCG5570.6589532462615938No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAGGTGTAAGGGAAGCCAC4860.5749574105621806No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCG4620.5465644520159001No Hit
CATAGAGATGTCAAGAGCAATGCCCAGCCACATTATTTTCTATGTGTAGA4340.5134393337119061No Hit
CATAGAAGCAGCATTGATCATCCTCCACCCAGTACAGGAGCACCCTCTAT3780.44718909710391824No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGCA3640.43062653795192124No Hit
CATAGACTCAAGAAACTTACAATCATGGCAGAAAGTGAAGGAGAGGCCAC3570.42234525837592274No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATTACAGGAG3370.3986844595873557No Hit
CATAGAACATCGCACACACATGGAACTCCTATGTAATGTCTTATTTTGTT2960.3501798220707931No Hit
CATAGAGATGTCAAGAGCAATGCCCACCCCATCCTACATGTGTCTATGTG2870.3395324626159379No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTAAGGCTTGTGAGGGCTG2850.3371663827370812No Hit
CATAGACCATCTGCGCATCCTGTCTGAGTAAGGCTTGTGAGGGCTGAAGT2710.3206038235850842No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAACAGGTACTGGGATTACAGG2700.31942078364565585No Hit
CATAGACCATCCTCCCACCTTGACCTTCCAAAGTGCTAGGATAATAGGTG2530.2993091046753738No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCACCCAGTACAGGAGCACC2380.28156350558394855No Hit
CATAGACTACCACTACCCAGCACAGCATTTTAACACAGCATTGAAGTTCT2330.2756483058868067No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTAGGATTACAAGTG2300.2720991860685217No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCCTAGCCATTTTTGGTTCTATG2240.26500094643195155No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACACACG2090.24725534734052623No Hit
CATAGAGATGTCAAGAGCAATGCCCAAGGCTTGTGAGGGCTGAAGTCTAT2020.2389740677645277No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTTGACAAAATAAACA2010.2377910278250994No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACACTCTTGCTCTTTG1970.23305886806738596No Hit
CATAGACCATCCTCCCACCTTGACCTCTCAAAGTGCTAGGGTTACAGGCA1800.21294718909710392No Hit
CATAGACCATCCTCCCACCTTGACCTCCATCTTGACCTCCCAAAGTGCTG1780.21058110921824721No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGTATTACAGGTG1760.2082150293393905No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATTTCTGACAAAGCAAACA1740.20584894946053378No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA1710.2022998296422487No Hit
CATAGAGAATACAATGAACTGTGATGGCATTGCTCTTTGACTTATGATGG1700.20111678970282038No Hit
CATAGAACATCGCACACACATGGAACATCGCTGACTTCTCTTAAACAGTT1690.199933749763392No Hit
CATAGACCATCCTCCCACCTTGACCTTCCCGGTAGCTGGGACTACAGGCA1630.19283551012682187No Hit
CATAGAAGGTGATAATCATGACAGCCAATTGATCTTTGACAAAGCAAACA1610.19046943024796517No Hit
CATAGACCATCTGCGCATCCTGTCTGGCTTCCCTGCTTGTCTTTCATCTA1580.1869203104296801No Hit
CATAGAAGCAGCATTGATCATCCTCCAGCAGCATTTTAACACAGCATTGA1560.1845542305508234No Hit
CATAGAGAATACAATGAACTGTGATGGCAGTGTACTCCTATGTAATGTCT1440.17035775127768313No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTTGGATTACAGGTG1350.15971039182282792No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1230.14551391254968768No Hit
CATAGAGATGTCAAGAGCAATGCCCATGCTGAAGTCCCATGATCTATGTG1210.14314783267083098No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1190.14078175279197427No Hit
CATAGAAGCAGCATTGATCATCCTCCACACTGAGGCACTTGGTCCAGACT1170.13841567291311754No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1160.1372326329736892No Hit
CATAGAAGGTGATAATCATGACAGCCACCCCATCCTACATGTGTCTATGT1130.13368351315540414No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1120.13250047321597577No Hit
CATAGATCCCAGGCTTTAGAAAATATACCACCCAGTACAGGAGCACCCTC1100.13013439333711907No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAGTGTTGGGATTATAGGCGT1100.13013439333711907No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGGATGACAGGCA1070.126585273518834No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1060.12540223357940564No Hit
CATAGACTGTTCTTTTAAATTAACACAGTCAGAGACTTGGTCTCATAGAC1050.1242191936399773No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGAAG1050.1242191936399773No Hit
CATAGACCATCCTCCCACCTTGACCTCCCCAGTGCTGGAATTACAGGAGT1040.12303615370054892No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGAGATTACAGGCA1010.11948703388226385No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1000.11830399394283551No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA990.11712095400340716No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGATCTTTGACAACGCAAACA970.11475487412455045No Hit
CATAGAAGCAGCATTGATCATCCTCCAACACTGACACTCTTGGTCTTTGT930.11002271436683703No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGGGCTGGGATGACACGCA920.10883967442740868No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA920.10883967442740868No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGTTAGGATTACAGGCA900.10647359454855196No Hit
CATAGAAGGTGATAATCATGACAGCCAACTGCTCTTTGACAAAGCAAACA900.10647359454855196No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTACTGGGATTATAGGCG870.10292447473026689No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGCACTGGGATTACAGGTG870.10292447473026689No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA860.10174143479083854No Hit
CATAGACCATCCTCCCACCTTGACCTCCCAAAGTGCTGGAATTACAGATG850.10055839485141019No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)