FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806785

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806785
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170347
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC100875.921442702248939No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA86425.073174168021744No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA74414.368142673484124No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC69464.077559334769617No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA51453.020305611487141No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA50152.943990795259089No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT48032.819538941102573No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA45252.656342641784123No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA44412.607031529759843No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG29141.7106259576041845No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG28921.6977111425502063No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT27451.6114166965077166No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC20881.225733356032099No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC19481.143548169324966No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT18921.110674094642113No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT16550.9715463142878947No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA15810.9281055727426957No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA15280.8969926092035668No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT14810.8694018679518865No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA14050.8247870523108713No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA13700.8042407556340881No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTGGTGGTGCTGGAACTAGTTCT12930.7590389029451649No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCAGCATGAGAAGAATGGCCTCT12900.7572777918014406No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCTATGAGGATGACTTATGG12510.734383346933025No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA12410.728512976453944No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT12130.7120759391125174No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA12120.7114889020646092No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC11990.7038574204418041No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC11780.6915296424357341No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG11770.690942605387826No Hit
CATAGACAGAACACCACACCCCTGTCAGTGTTCCAACTCTATAGATTATG11310.6639389011840537No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA10530.6181500114472225No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT10330.6064092704890606No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT9800.5752963069499316No Hit
CATAGAACTTTCAGTAATAGGGGACAAGAACAAGGGCATGGTCAAGTGTC9640.5659037141834021No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC8360.4907629720511662No Hit
CATAGATTTGGCACTCACATACACGCCATAGATCTGGGAGGAACAGGGAG8240.483718527476269No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG8060.47315186061392334No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCATAGAACAAGGGCATGGTCAAGT8050.47256482356601526No Hit
CATAGAAGGGCAATTATCTCATCCTAGACATAGAAGGGCAAGTGTATGGT7930.4655203789911182No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG7880.46258519375157764No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT7850.4608240826078534No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAACACTGACGACAAGGTTTTC7730.45377963803295623No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT7590.44556111936224296No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGGAACAAGGGCATGGTCAAG7570.4443870452664268No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG7280.4273629708770921No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT7150.4197314892542868No Hit
CATAGAGCACCCAACTATCCTTCAGCACACTGACGACAATGGGCACACTT7050.4138611187752059No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA7040.4132740817272978No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA6930.4068166742003088No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA6810.39977222962541165No Hit
CATAGACCATGTAATACCATCGTGAGCAGATCTATGTTGTAGACAAGCAC6720.3944888961942388No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGCTACCGTACCAAGTATATGAC6680.3921407480026064No Hit
CATAGAGGCAAGCTAACTCTGAGATCCAAGTATATGACACATTACACCAG6600.3874444516193417No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT6310.370420377230007No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT6280.3686592660862827No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA6220.36513704379883416No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAGCCCAGTTTTCCTTCTCTAT6180.3627888956072018No Hit
CATAGACTCCTGAGTTCAAGATTCTACCCACCCGTAATCCCTCCCTTTTC6080.35691852512812083No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA6050.35515741398439654No Hit
CATAGATGCACCAGAAGCCACCTACCGTAAGGAAAATGTCAGTGGGCCAT5940.3487000064574075No Hit
CATAGACTTTCTGAAATTGTTTGCTGCTTTGGGGGAAGAGAAACAGAATC5870.34459074712205084No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT5760.33813333959506187No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT5410.31758704291827855No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA5380.3158259317745543No Hit
CATAGAGCATCCTCGTAATAGCAAACATTGGGAGGAACAGGGAGATGTTC5310.31171667243919765No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA5260.30878148719965715No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG5130.30115000557685195No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA5040.2958666721456791No Hit
CATAGACCCCCATGCAACCACATCTATGTGTAGATGGTGAAAAGTAGGGG4980.29234444985823055No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG4960.2911703757624144No Hit
CATAGACCATGTAATACCATCGTGAGCAGGATGACTTATGGAATCTGAAG4850.28471296823542536No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG4790.2811907459479768No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC4790.2811907459479768No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCACACCCGTAATCCCT4770.28001667185216056No Hit
CATAGACAGTATGGGGGAAACGGCTCCATAGATCTGGTGGTGCTGGAACT4560.2676888938460906No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4350.25536111584002064No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA4290.2518388935525721No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTACCGTATCCATCAGAGCATCACC4280.25125185650466403No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA4220.24772963421721547No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA4180.2453814860255831No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGCCTGGCAAAAGGGTAAG4100.24068518964231833No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGCCCTGTGATTGTCCTGGTCTAT4080.23951111554650217No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT4070.23892407849859404No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC3700.21720370772599457No Hit
CATAGACAGTCCTGCCGTGTACATGTACAAACCAAACAATAGCCAGTCTA3620.21250741134272985No Hit
CATAGAGCACCCAACTATCCTTCAGCACGCTGACATCCCAACCACACGTC3460.20311481857620034No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC3340.1960703740013032No Hit
CATAGATTTGGCACTCACATACACGCACACCCCTTTACCTACCTTCTCAG3270.19196111466594656No Hit
CATAGAAAAGTCACCATGCAGCCCTGTACACATAGATCTGGGAGGAACAG3250.19078704057013038No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACCAAGTCTTAGGAGTTC3220.18902592942640611No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT3140.18432963304314134No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT3060.1796333366598766No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAACAAGGGCATGGTCAAGTGTCT3060.1796333366598766No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC3020.17728518846824423No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG3010.17669815142033615No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC2900.17024074389334712No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG2690.15791296588727716No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA2680.15732592883936905No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2680.15732592883936905No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGACCAAGTCTCTGAACAAG2670.15673889179146097No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTAGAACAAGGGCATGGTCAAGTGT2610.1532166695040124No Hit
CATAGACAGAACACCACACCCCTGTCACCACAGCCCAGTTTTCCTTCTCT2530.14852037312074765No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2480.1455851878812072No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA2410.14147592854585053No Hit
CATAGAATCCCTGCCCTTGACCTTGGCTCTCTTCCGCCTTTATCCTTCTA2410.14147592854585053No Hit
CATAGAATTGCCTACTTTGGGACCCAAGTATATGACACATTACACCAGTC2400.14088889149794243No Hit
CATAGACAGTCCTGCCGTGTACATGTGTAGAACCACCAGCATGAGAAGAA2300.1350185210188615No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2230.13090926168350486No Hit
CATAGAATTGCCTACTTTGGGACCCATCGGCCGCACTGAAATTGTCTATG2200.12914815053978054No Hit
CATAGACAGAACACCACACCCCTGTCTATGAGACTTAGGAGTTCTGGCCC2150.1262129653002401No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC2150.1262129653002401No Hit
CATAGAATTGCCTACTTTGGGACCCAGGAAAATGTCAGTGGGCCATCTAT2060.12092963186906724No Hit
CATAGAATCCCTGCCCTTGACCTTGGACACTGACGACATGGTTCTACACC1980.11623333548580252No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA1970.11564629843789441No Hit
CATAGAGCACCCAACTATCCTTCAGCACACTGACATCCCAACCACACGTC1900.11153703910253775No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG1900.11153703910253775No Hit
CCCGTAATCCCTCCCTTTTCTATGAGACCAAGTCTCTGCTACCGTACAGA1890.11095000205462967No Hit
CATAGAATTGCCTACTTTGGGACCCAACCCCTTCATTTTGCTGGAACTCT1800.10566666862345682No Hit
CATAGACAGAACACCACACCCCTGTCTTAGGAGTTCTGGCCCCTGTCTAT1800.10566666862345682No Hit
CATAGACAGTCCTGCCGTGTACATGTCCTGCCGTGTACAGCCTACATCCC1740.10214444633600825No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)