FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806786

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806786
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170347
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG104686.145103817501923No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT87075.11133157613577No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT74764.388688970160906No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG68734.0347056302723265No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT50782.980974129277299No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT50092.94046857297164No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT47552.7913611628029846No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT44882.6346222710115237No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT43972.581201899651887No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT31831.8685389234914616No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG29181.7129741057958165No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG28851.6936018832148496No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG19381.1376777988458853No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC18371.0783870570071676No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT16500.9686111290483542No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT15520.911081498353361No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG15040.8829037200537727No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT14870.872924090239335No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC14290.8388759414606656No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT13500.7925000146759262No Hit
CATAGAACTAGTTCCAGCACCACCAGCATTCTTTCTCCAGACCTTCATCT13060.7666703845679701No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13050.766083347520062No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT12830.753168532466084No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCATAGATCTGCTCACGATGG12490.7332092728372087No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT12240.7185333466395064No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT12100.7103148279687931No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT12080.7091407538729769No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA12060.7079666797771608No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC11980.703270383393896No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG11910.6991611240585394No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACACTGACAGGGGTGTGGT11260.6610037159445132No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT10540.6187370484951304No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT10510.6169759373514062No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG9780.5741222328541155No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC9680.5682518623750344No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC8610.5054388982488685No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG8280.4860666756679014No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTATGGCGTGTATGTGAGTGC8240.483718527476269No Hit
CATAGACACTTGACCATGCCCTTGTTCTATGGCTATCTTCTGCTGCACTG8130.47726111994928No Hit
CATAGAACTGACCATACACTTGCCCTTCTATGTCTAGGATGAGATAATTG7940.4661074160390262No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG7870.46199815670366956No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT7610.4467351934580591No Hit
CATAGACACTTGACCATGCCCTTGTTCCATAGACACTTGAAAGCTCCCTG7590.44556111936224296No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTTGCCAAGTAAGTC7580.44497408231433483No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC7310.42912408202081637No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT7250.4256018597333678No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT7250.4256018597333678No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA6940.40740371124821684No Hit
CATAGAACTGACCATACACTTGCCCTTCTGTCTAGGATGAGATAATTGCC6910.40564260010449255No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTACAACATAGATCTGCTCA6720.3944888961942388No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGCAGACACTTGA6690.39272778505051453No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGCTGAAGGATAGTT6580.3862703775235255No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC6510.38216111818816884No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT6250.36689815494255845No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT6240.3663111178946503No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTAGAATCTTGAACTCAGGAGTC6190.36337593265510987No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT6120.3592666733197532No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA6010.35280926579276417No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT6010.35280926579276417No Hit
CATAGATGGCCCACTGACATTTTCCTTACGGTAGGTGGCTTCTGGTGCAT5930.34811296940949943No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC5920.34752593236159135No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT5740.33695926549924565No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT5450.3199351911099109No Hit
CATAGAACATCTCCCTGTTCCTCCCAATGTTTGCTATTACGAGGATGCTC5320.31230370948710573No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC5290.31054259834338144No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA5210.3058463019601167No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG5100.2993888944331277No Hit
CATAGAAAAGGGAGGGATTACGGGTGTGGTCTCATAGAACTTTCCCACCG4960.2911703757624144No Hit
CATAGAACTGTCCCCTACTTTTCACCATCTACACATAGATGTGGTTGCAT4950.29058333871450626No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC4920.288822227570782No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGCAGTTAGGCTACTTGG4830.28353889413960914No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG4780.2806037089000687No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGCTCACGATGGTATTACATG4760.2794296348042525No Hit
CATAGAACTAGTTCCAGCACCACCAGATCTATGGAGCCGTTTCCCCCATA4690.2753203754688959No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA4490.26357963451073396No Hit
CATAGACCAGGACAATCACAGGGCACCAAGGTCAAGGGCAGGGATTCTAT4490.26357963451073396No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC4470.2624055604149178No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA4300.2524259306004802No Hit
CATAGAAGGGGTGATGCTCTGATGGATACGGTAGCAGCTCCTCTTCTCTT4260.2500777824088478No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT4190.24596852307349118No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT4180.2453814860255831No Hit
CATAGAACTCTTACCCTTTTGCCAGGCACTGACGCCATGCTGAAGTCCCA4090.24009815259441025No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT4080.23951111554650217No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3670.21544259658227033No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA3610.21192037429482175No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGCTGAAGGATAGTTGGGTGCTC3290.19313518876176275No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT3190.18726481828268182No Hit
CATAGACAGGGGCCAGAACTCCTAAGACTTGGTCTCATAGACAGGGGTGT3170.18609074418686564No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTGTGCGTGTATGTGAGTGCCAA3170.18609074418686564No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTATGTGTACAGGGCTGCATG3140.18432963304314134No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG3120.18315555894732516No Hit
CATAGACACTTGACCATGCCCTTGTTGACACTTGAAAGCTCCCTGGATCT3110.18256852189941708No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT3050.1790462996119685No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2990.17552407732451997No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC2860.16789259570171472No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGAACTTTCCCACCGCCCTTTT2700.15850000293518524No Hit
CATAGACACTTGACCATGCCCTTGTTCAGAGACTTGGTCTCATAGAACTT2660.15615185474355286No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2630.15439074359982857No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2630.15439074359982857No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC2620.1538037065519205No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2520.14793333607283954No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT2470.1449981508332991No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2400.14088889149794243No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC2390.14030185445003435No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGACAGGGGTGTGGTGTTCTGTCT2370.13912778035421816No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCAAGGTCAAGGGCAGGGATTCTA2360.13854074330631005No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2220.13032222463559676No Hit
CATAGAGGCCATTCTTCTCATGCTGGTGGTTCTACACATGTACACGGCAG2190.12856111349187246No Hit
CATAGACAGGGGCCAGAACTCCTAAGTCTCATAGACAGGGGTGTGGTGTT2170.12738703939605628No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA2160.1268000023481482No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG2130.1250388912044239No Hit
CATAGATGGCCCACTGACATTTTCCTGGGTCCCAAAGTAGGCAATTCTAT2000.1174074095816187No Hit
CATAGAAAAGGGAGGGATTACGGGTGTAGAACCATGTCGTCAGTGTCCAA2000.1174074095816187No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT1990.1168203725337106No Hit
CATAGAAAAGGGAGGGATTACGGGTGTAGAACCATGTCGTCAGTGTAGAT1970.11564629843789441No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1930.11329815024626205No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT1880.11036296500672159No Hit
CATAGACACTTGAAAGCTCCCTGGATCTATGTGTAGAACCATGTCGTCAG1850.10860185386299728No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT1810.10625370567136493No Hit
CATAGACGTGTGGTTGGGATGTCAGTGTGCTGAAGGATAGTTGGGTGCTC1760.10331852043182445No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTTGGGTCCCAAAGTAGGCAATTCT1740.10214444633600825No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGACATGTACACGGCAGGA1720.10097037224019209No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA1710.10038333519228398No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)