FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806789

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806789
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27893
Sequences flagged as poor quality0
Sequence length150
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGAGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA318911.432976015487757No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT19416.9587351665292365No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG19276.908543362133869No Hit
CATAGAGCAACAGGGACTCTCATTCACTGCTGGTGGGAATGCAAACTGGA14145.069372243932169No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT13404.804072706413796No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC12204.373857240167784No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT6082.179758362313125No Hit
CATAGAGGATCCCATCTGAGTTGGTCAAAGTCTGTGAGTAAAGTGCTAAT5642.022012691356254No Hit
CATAGACCAATAAAAGTTGATGGGATGAAGTAAGAAACATTTTAGAGCAC4801.7208618649840461No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGAGTCACTTCTTTTGATAATTC4751.7029362205571292No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA4101.469902843007206No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA3971.4232961674972215No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT3671.3157423009357188No Hit
CATAGACAGGGAGGCGTATAAGTGATGAAATCTCTACTAAAAATACAAAA3501.2547951098842003No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT3321.1902627899472986No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATATGTCTTTATCAGCAGCATT3051.093464310041946No Hit
CATAGAGATGTTTGATAAGCAGGGTGACTAGAGTTAATGGTAATTTATTG2981.068368407844262No Hit
CATAGATGTATACAAGCTGTCACAGACAACATTTTTCTTCATTCAGCAAC2851.0217617323342774No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA2730.9787401857096762No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT2460.8819417058043236No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA2390.8568458036066398No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA2250.8066539992112716No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGATTTAATAAATTGTGAAATG2210.792313483669738No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG2180.7815580970135877No Hit
CATAGATGAAAGCCTGTTGAATTTATGACATTTTTTATTCTCTCTCTTCA2160.7743878392428208No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT2100.7528770659305202No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA1890.6775893593374682No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC1830.6560785860251676No Hit
CATAGAAACCCCAAAGGCTATGTTCATTCTATGCCTTCATTCTGCCTGCA1700.609471910515183No Hit
CATAGAGCTGGCTTCCTAACTTCCAACCTTCCAGCAAGCCTATTAACCTT1670.5987165238590327No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA1540.5521098483490482No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA1430.5126734306098304No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG1420.509088301724447No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG1380.49474778618291326No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1270.4553113684436955No Hit
CATAGACAGAAACCACCCAGACAACCCACAGAGTAGTAAGAAGTAATAAA1250.4481411106729287No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGGTTCTACACATAGATGCCCTT1170.41946007958986126No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCGCATTCTA1150.41228982181909446No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGTACTGGTACCAAAACAG1050.3764385329652601No Hit
CATAGAGAGATTTTGGGCTGAGACAATGAGGTTTTCTAAATATACAATCA990.35492775965295953No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC990.35492775965295953No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA970.3477575018821927No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG960.34417237299680925No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT940.3370021152260424No Hit
CATAGAGATGTTTGATAAGCAGGGTGAAACACCGTCTCTACAAAAAAATT890.31907647079912527No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA850.3047359552575915No Hit
CATAGACCTTTGGGTTCATATCATCTGGCACAGACCTTGCCTCTTCCAGC790.2832251819452909No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTCAGTACAAAATTTCTC750.26888466640375724No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATATACAATCA750.26888466640375724No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCCAGACATGAGCCAGT690.24737389309145663No Hit
CATAGAGCGATTTTGGGCTGAGACGATGAGGTTTTCTAAATATACAATCA690.24737389309145663No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGAAATCTGACATTTCTCATAA650.2330333775499229No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACACCATCTCTA620.22227799089377262No Hit
CATAGAACACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT530.19001183092532176No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCAGTCTCTG520.18642670203993833No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTGGTAGAGACAGCGTT510.1828415731545549No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGC510.1828415731545549No Hit
CATAGATCATGGGACTTCAGCATGACGGTGTTTGCAGATTTGGACCTGCG460.16491592872763777No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAATCCCGTCTCTA460.16491592872763777No Hit
CATAGACACCATGCCTGGCTAATTTTTGTACTTTTAGTAGAGACAGCGTT460.16491592872763777No Hit
CATAGATCATGGGACTTCAGCATGGCAACATGGTGAAACCCCGCTTTTAC450.16133079984225432No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCAACTCTA420.15057541318610404No Hit
CATAGAGATGTTTGATAAGCAGGGTGACCATGGTCAAAATAATGTATTGT420.15057541318610404No Hit
CATAGACACCATGCCTGGCTAATTTTTAAAAAGTAGCTGGGCATGGTGGC380.1362348976445703No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC370.13264976875918688No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG370.13264976875918688No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG370.13264976875918688No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGTAACCCTGTCTCTA370.13264976875918688No Hit
CATAGAGAGATTTTGGGCTGAGACAATAATGCCGCATATCTACAACTATC370.13264976875918688No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA360.12906463987380346No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA340.1218943821030366No Hit
CATAGACCCCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT330.11830925321765318No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA330.11830925321765318No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGTTTTCTAGATATACAACAAA320.11472412433226975No Hit
CATAGATGCCCTTTTTGTGTACTTCCACCCTTTTTGTGTGCTTCTTTCAA320.11472412433226975No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTG290.10396873767611946No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTGCTA290.10396873767611946No Hit
CATAGAGCCAAGGAAAGTTGAATGGATGAAGTAAGAAACATTTTAGAGCA280.10038360879073603No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGCAAAACCCTGTCTCTA280.10038360879073603No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)