FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806792

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806792
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences153770
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG89585.825583663913638No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT66064.296026533133902No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT62774.082070624959354No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG55153.586525330038369No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT43662.8393054562008193No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT41222.680626910320609No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT35252.2923847304415683No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT34942.2722247512518696No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG31322.0368082200689344No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT28941.882031605644794No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG28811.8735774208233076No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT26951.752617545685114No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT17001.105547245886714No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG15901.03401183585875No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT15501.007998959484945No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG14420.9377641932756715No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT12930.8408662287832478No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC12780.8311114001430707No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC11420.7426676204721337No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCCTCTTCACCTCCCAGATCT11400.7413669766534434No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG11310.7355140794693373No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC11110.7225076412824348No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT10860.7062495935488067No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT10600.6893412239058334No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT10320.6711322104441699No Hit
CATAGAACTAGTTCCAGCACCACCAGACACTGCTCACGATGGTATTACAT10140.6594264160759575No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG10050.6535735188918514No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9830.6392664368862587No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG9550.6210574234245951No Hit
CATAGAACTGACCATACACTTGCCCTTCTGTCTAGGATGAGATAATTGCC9440.6139038824217987No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG9410.6119529166937634No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTGCTGAAGGATAGTT9330.6067503414190024No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT9290.6041490537816219No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG9280.6034987318722768No Hit
CATAGAGGGATGGTATCAGAGAAGGCTAACTTCGCCTGCCTTTCTCTATG9280.6034987318722768No Hit
CATAGAGGGATGGTATCAGAGAAGGCTACACTGCTCACGATGGTATTACA9210.5989464785068609No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC8810.5729336021330559No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT8560.5566755543994277No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT8270.5378162190284191No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA7820.5085517331078884No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT7550.49099304155557No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT7360.4786369252780126No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC7180.4669311309098004No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC7140.46432984327241983No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT7110.46237887754438445No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT7000.4552253365415881No Hit
CATAGAGAAGCCAGGGAACAAAGTGGTACGGTTGCAGGATGAATGGGGAC6770.4402679326266502No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC6710.43636600117057944No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG6660.4331143916238538No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA5900.3836899265136242No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATCTTCTGCTGCACTGCTCTATG5780.37588606360148274No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT5760.3745854197827925No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA5670.36873252259868633No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT5640.366781556870651No Hit
CATAGATGGCCCACTGACATTTTCCTCTGCTCACGATGGTATTACATGGT5600.36418026923327046No Hit
CATAGACAATTTCAGTGCGGCCGATGTACGGTAGCAGCTCCTCTTCTCTT5570.3622293035052351No Hit
CATAGAGAAGGAAAACTGGGCTGTGGATCTCAGAGTTAGCTTGCCTCTAT5470.3557260844117838No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGCAATTCTGGGTAGAATCTTGAAC5410.35182415295571307No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTTACGGTAGCAGAGTGGGAG5280.34336996813422643No Hit
CATAGACACTTGACCATGCCCTTGTTCTGCTTTTACAAACTCAAGTGATT5270.3427196462248813No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT5180.3368667490407752No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT5160.33556610522208496No Hit
CATAGATTCTGTTTCTCTTCCCCCAAACATGTACACGGCAGGACTGTCTA5010.32581127658190806No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT5000.3251609546725629No Hit
CATAGACAATTTCAGTGCGGCCGATGCTATTGTCTGCTTTTACAAACTCA4930.320608701307147No Hit
CATAGACACTTGACCATGCCCTTGTTCTATGTCTGAGGAAGTGACATGCC4730.3076022631202445No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCTAACTTCGCCTGCCTTTCTCT4570.2971971125707225No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC4570.2971971125707225No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG4540.29524614684268713No Hit
CATAGACACTTGACCATGCCCTTGTTGATTTAGGAAGCAGGGTTCTATGT4510.29329518111465175No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTGTGTCTAGGATGAGATAATTGC4390.2854913182025103No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC4310.28028874292774925No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4300.2796384210184041No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTAGATGTGGTTGCATGGGGGTCT4270.2776874552903687No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT4260.2770371333810236No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT4250.2763868114716785No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCATAGATGTGGTTGCATGGGGG4150.26988359237822723No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTACGGTAGCAGAGTGGGAGT4140.2692332704688821No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3990.2594784418287052No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCGTGTTGCCAAGTAAGTCT3950.2568771541913247No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA3940.2562268322819796No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT3920.2549261884632893No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT3870.2516745789165637No Hit
CATAGAACTAGTTCCAGCACCACCAGCTCATAGATGTGGTTGCATGGGGG3600.2341158873642453No Hit
CATAGAGGCCATTCTTCTCATGCTGGTATTACATGGTCTGCTTTTACAAA3380.21980880535865255No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAAGCAGCAAACAATTTCAGAAAGT3360.2185081615399623No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT3260.21200494244651102No Hit
CATAGATGGCCCACTGACATTTTCCTACGGTAGGTGGCTTCTGGTGCATC3210.2087533328997854No Hit
CATAGAAGGAGCTGGGAGTTGAGATAGATGTGGTTGCATGGGGGTCTATG3160.20550172335305977No Hit
CATAGACTCAGAACTGGCTCTAATTCCTGGGTAGAATCTTGAACTCAGGA3060.19899850425960852No Hit
CATAGAACTGACCATACACTTGCCCTTCGGTAGGTGGCTTCTGGTGCATC3050.19834818235026339No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC3040.19769786044091828No Hit
CATAGAACTCTTACCCTTTTGCCAGGTACGGTTGCAGGATGAATGGGGAC3020.19639721662222798No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT3010.1957468947128829No Hit
CATAGAAAAGGGAGGGATTACGGGTGGTAGCAGAGACTGGATCTCAGAGT2990.19444625089419262No Hit
CATAGACAGGGGCCAGAACTCCTAAGACACTGAACGAAATTTAGGTGAGC2980.19379592898484752No Hit
CATAGAACTCTTACCCTTTTGCCAGGAGTTGACAAACGACAGCTTCTATG2910.18924367561943162No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTTGCAGGATGAATGGGGAC2890.18794303180074137No Hit
CATAGAACTCTTACCCTTTTGCCAGGATTGTAGGAGTAGAGGAGTTGACA2840.18469142225401575No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC2780.18078949079794499No Hit
CATAGAAAAGGGAGGGATTACGGGTGTAGAACCATGTCGTCAGTGTAGAT2750.1788385250699096No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2710.1762372374325291No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2680.17428627170449373No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCTACGGTTGCAGGATGAATGGGGA2600.1690836964297327No Hit
CATAGACACTTGACCATGCCCTTGTTCCATAGACACTTGAAAGCTCCCTG2550.16583208688300707No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT2540.16518176497366197No Hit
CATAGAGGCCATTCTTCTCATGCTGGTACGGTAGCAGAGTGGGAGTCATT2520.16388112115497172No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2480.1612798335175912No Hit
CATAGACACTTGACCATGCCCTTGTTGGTCTCATAGACACTTGAAAGCTC2450.15932886778955582No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2440.15867854588021071No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2440.15867854588021071No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGGTAGGTGGCTTCTGGTGCATCT2420.15737790206152047No Hit
CATAGAAGGGGTGATGCTCTGATGGAGGTGATGCTCTGAGGAAGTGACAT2420.15737790206152047No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAGGAGTTGACAAAC2320.1508746829680692No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT2260.14697275151199843No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA2180.14177017623723745No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACCATGTCGTCAGTGTGCG2060.13396631332509593No Hit
CATAGAACTGACCATACACTTGCCCTTCTATGTGTACATGTACACGGCAG2030.13201534759706055No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG2030.13201534759706055No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACACTACGACATGTACACGGCAG2030.13201534759706055No Hit
CATAGAACTGACCATACACTTGCCCTAGAACTTTCCCACCGCCCTTTTCT2020.13136502568771544No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGAGAAGGTAGGTGGCTTCTGGTG2010.13071470377837027No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1990.12941405995968006No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC1970.1281134161409898No Hit
CATAGACTGGCTATTGTTTGGTTTGTACAGGGCTGCATGGTGACTTTTCT1960.12746309423164465No Hit
CATAGAAAAGGGAGGGATTACGGGTGCATCTATGCCCACCTAAACTCCTG1900.12356116277557391No Hit
CATAGAAAAGGGAGGGATTACGGGTGTAGAACCATGTCGTCAGTGTCCTC1900.12356116277557391No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT1880.12226051895688367No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT1870.12161019704753855No Hit
CATAGAGTTCCAGCAAAATGAAGGGGGAAGGAGTTGACAAACGACAGCTT1840.11965923131950315No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG1840.11965923131950315No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1820.1183585875008129No Hit
CATAGAACTCTTACCCTTTTGCCAGAGTGGGAGTCATTCATGATCTATGT1810.11770826559146777No Hit
CATAGACACTTGACCATGCCCTTGTTCCTCATAGACACTTGAAAGCTCCC1800.11705794368212265No Hit
CATAGATCCATGGTGTGCAAGGACAATCCATGGTGTGCACAGGACATTGG1780.1157572998634324No Hit
CATAGAACCAACCAATAATAATGTGCTTGTACACTGCTCACGATGGTATT1770.11510697795408728No Hit
CATAGAACTGACCATACACTTGCCCTTCTAGTCTAGGATGAGATAATTGC1730.11250569031670678No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACCATTGAACGAAATTTAG1730.11250569031670678No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1720.11185536840736165No Hit
CATAGACAGGGGCCAGAACTCCTAAGACTTGGTCTCATAGACAGGGGTGT1690.10990440267932627No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCAGTTCTGGAGGAGTTGACAAAC1680.10925408076998115No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA1570.10210053976718476No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTCCCAAAGTAGGCAATTC1550.1007998959484945No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTATGCAGGGCTGCATGGTGA1540.10014957403914938No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)