FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806793

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806793
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87940
Sequences flagged as poor quality0
Sequence length150
%GC41

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1939222.05139868091881No Hit
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA82159.341596543097566No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG53666.101887650670912No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG46985.342278826472595No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG33633.8241983170343414No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA33603.8207869001591996No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC22492.557425517398226No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG19812.2526722765521945No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT16841.9149420059131224No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT16011.8205594723675234No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA15261.7352740504889699No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA10051.1428246531726176No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG9391.0677734819194906No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA7920.9006140550375255No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC7580.8619513304525813No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT6110.6947919035706163No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA5500.6254264271093928No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTACACTGACGACATGGTTCTACA5400.6140550375255857No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG5360.6095064816920628No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT4640.5276324766886513No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA4570.5196725039799863No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA4010.45599272231066634No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT3490.3968614964748692No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA3180.36161018876506706No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT3130.3559244939731635No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC3050.3468273823061178No Hit
CATAGACCAGCAGACACTCCCATCATTCCCCTGCAGTCTTTGGAGGAATC2910.3309074368887878No Hit
CATAGAGAAGACTCCCTCAACCCACCTTCCCCACACCCTCTTCTTCTATG2900.3297702979304071No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA2830.3218103252217421No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATCTGAGGAGAATTCAAGCTGC2830.3218103252217421No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT2720.30930179667955426No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTGTTTCCCCACTCAAATACCA2710.3081646577211735No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGATCATTGTTCACTGC2640.3002046850125085No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2410.2740504889697521No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2360.26836479417784853No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA2340.26609051626108715No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT2180.2478962929269957No Hit
CATAGATGAGGACACCATAAAGACAACACACTGACGACATGGTTCTACAC2070.2353877643848078No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTGCTTCTTGTGGTAACTGGTC1990.22629065271776214No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT1930.21946781896747783No Hit
CATAGACAGTGCCTTTGTGCGTGTTACACTGACGACATGGTTCTACACAT1900.2160564020923357No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGCTATACCACACT1820.20695929042529No Hit
CATAGATCCACGTGAGAATAAAGCATACACACTGACGACATGGTTCTACA1820.20695929042529No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTAGGCTAATCTGAAATCTT1720.19558790084148286No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT1700.1933136229247214No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT1670.18990220604957925No Hit
CATAGACAGTGCCTTTGTGCGTGTTACTGCGTTGGTCCCTCCACCCCATC1590.18080509438253353No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG1590.18080509438253353No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG1560.1773936775073914No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACATTGCTTCTTGTGGTAACTG1470.16715942688196497No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT1450.16488514896520354No Hit
CATAGACCCAGATGCTGTCCCACTAATGCTGTCCCACGCTGTCCTTCTCT1440.16374801000682285No Hit
CATAGAAATGATGCTGAAGGGCCTGCCGACATGGTTCTACACATAGAAAT1420.1614737320900614No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG1400.15919945417329998No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC1370.15578803729815782No Hit
CATAGACTCATTGCACTTTCCACAACTGTTCATTGCACTGTCCCAACTGT1320.15010234250625426No Hit
CATAGAAATGATGCTGAAGGGCCTGCGACATGGTTCTACACATAGAAATG1300.14782806458949282No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAATGGTGGAAGGGTAAGAGAGGGT1290.1466909256311121No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCTATGAGACCAAGTCT1270.1444166477143507No Hit
CATAGAGAAGACTCCCTCAACCCACCCATGGTCTACCAGTTATTAGTTGA1240.14100523083920855No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA1200.1364566750056857No Hit
CATAGACACAACAGAGAGAACGGGCTGCCCTCTCTGCTGTTCCTTCTATG1190.13531953604730498No Hit
CATAGAGTCCAACTATTCCAGCACCATAGAGATCCCACCATTTGCCATCT1160.13190811917216283No Hit
CATAGACGGATTATTCTCTCCATGGTCTCAAACTGCTGGGGTTGCTCTAT1140.12963384125540142No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG1130.1284967022970207No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGGGGCTCACACCTGTATTCCCCA1100.12508528542187855No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT1090.12394814646349785No Hit
CATAGAAAAAACAGTTGGCCAGGCATCAGGCTAATCTGAAATCTTCGTGT1090.12394814646349785No Hit
CATAGATCAAGGAAAACACCAGCCCACCTGCTCCTTCCCCACACCCTCTT1050.11939959062997499No Hit
CATAGATGTGTAGCCTGGGTCTGACAACCTCTGTCCTGGCTGTGAACCCT1040.11826245167159427No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGACGCTATACCACACTACA1030.11712531271321355No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC1000.11371389583807141No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGTGGCTCAGGTATGTCTTTATTA1000.11371389583807141No Hit
CATAGATCAAGGAAAACACCAGCCCAGGCAACATAGCAGGATCCTGCCTC970.11030247896292927No Hit
CATAGACTCATTGCACTTTCCACAACTGTTTCCCCACTCATCTGTTTCCC960.10916534000454856No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG950.10802820104616785No Hit
CATAGAAATGATGCTGAAGGGCCTGGTTCTACACATAGAAATGATGCTGA920.1046167841710257No Hit
CATAGAAATGATGCTGAAGGGCCTGCCTACACATAGAAATGATGCTGAAG920.1046167841710257No Hit
CATAGACCCAAGACCCCAGCCTTTACACTGACGCTATACCACACTACACA920.1046167841710257No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC920.1046167841710257No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT910.103479645212645No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)