FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806794

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806794
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87940
Sequences flagged as poor quality0
Sequence length150
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2034523.135092108255627No Hit
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT81969.319990902888332No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG53676.103024789629292No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG46555.293381851262224No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC33713.8332954287013874No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG33623.8230611780759607No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG22892.602911075733455No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG19982.272003638844667No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT16581.8853763929952239No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT16051.8251080282010463No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG15741.7898567204912441No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT15441.7557425517398226No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT10031.1405503752558563No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA8060.9165340004548556No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC7780.8846941096201957No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG6330.719808960654992No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT6060.6891062087787128No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA5390.6129178985672049No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC5370.6106436206504435No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA4710.5355924493973163No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT4580.5208096429383671No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA3970.4514441664771435No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT3490.3968614964748692No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACGAATGAGGAAACAGGCAC3170.3604730498066864No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT3120.3547873550147828No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG3000.34114168751421425No Hit
CATAGATTCCTCCAAAGACTGCAGGGGAATGATGGGAGTGTCTGCTGGTC2970.3377302706390721No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGTGGGTTGAGGGAGTCTTCTCTATG2870.32635888105526495No Hit
CATAGAGCAGCTTGAATTCTCCTCAGATAGATGCCTGGCCAACTGTTTTT2870.32635888105526495No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT2830.3218103252217421No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTGGGAGAAGAAATGTTGG2720.30930179667955426No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC2670.30361610188765065No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTATGATGGGAGTGTCTG2620.29793040709574714No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC2410.2740504889697521No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG2370.2695019331362293No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA2240.25471912667728No Hit
CATAGACCAGTTACCACAAGAAGCAATGAGCATGCCTTTGATAAAACATC1930.21946781896747783No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGAGCATGCCTTTGAT1780.20241073459176712No Hit
CATAGAACACGAAGATTTCAGATTAGCCTACACTGTCATTGTGGGTTTTA1750.198999317716625No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT1700.1933136229247214No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT1690.19217648396634068No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG1640.18649078917443712No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG1540.17511939959062997No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGCAAGCCACCCCGTGTGGTGCAGGA1530.17398226063224928No Hit
CATAGACCAGTTACCACAAGAAGCAATGTACCCTGGGAGAAGAAATGTTG1530.17398226063224928No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG1500.17057084375710713No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG1430.1626108710484421No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC1420.1614737320900614No Hit
CATAGATTCAGAGAAGGACAGCGTGGGACAGCATTAGTGGGACAGCATCT1420.1614737320900614No Hit
CATAGACCCTCTCTTACCCTTCCACCATTCACTCTCCCACCATTCAGACT1320.15010234250625426No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCAATGAACAGTTGTGGA1240.14100523083920855No Hit
CATAGAAGGAACAGCAGAGAGGGCAGCCCGTTCTCTCTGTTGTGTCTATG1230.13986809188082783No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGGTGGGTTGAGGGA1190.13531953604730498No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT1150.1307709802137821No Hit
CATAGATGGCAAATGGTGGGATCTCTATGGTGCTGGAATAGTTGGACTCT1150.1307709802137821No Hit
CATAGAGCAACCCCAGCAGTTTGAGACCATGGAGAGAATAATCCGTCTAT1130.1284967022970207No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGCAGGCCCTTCAGC1120.12735956333864No Hit
CATAGAACACGAAGATTTCAGATTAGCCTGATGCCTGGCCAACTGTTTTT1110.12622242438025927No Hit
CATAGACCCTCTCTTACCCTTCCACCCAAGCTCTATGTGTAGAACCATGT1100.12508528542187855No Hit
CATAGACCCCATGACTCAGCTCCTCAAAGTGTGGGGAATACAGGTGTGAG1100.12508528542187855No Hit
CATAGATCTCACCGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1090.12394814646349785No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGAGCAGGTGGGCTGGTGTTTTCCTT1050.11939959062997499No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA1020.11598817375483284No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1020.11598817375483284No Hit
CATAGAAGGAACAGCAGAGAGGGCAGCTTCAGGGTTCACAGCCAGGACAG1010.11485103479645213No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC1000.11371389583807141No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG1000.11371389583807141No Hit
CATAGAGCTAATAAAGACATACCTGAGCCACCATGCCTGGCCAACTGTTT990.11257675687969068No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTAAAGGCTGGGGTCTT990.11257675687969068No Hit
CATAGATGGTATTTGAGTGGGGAAACAGATGAGTGGGGAAACAGTTGTGG950.10802820104616785No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCAGGC940.10689106208778712No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGGCAGGCCC940.10689106208778712No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT940.10689106208778712No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA930.10575392312940642No Hit
CATAGATGCCACCACACCCAGTTAATGTTTTCATTTCGTGGAGGCAGGAT930.10575392312940642No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)