FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82364
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1558418.920887766499927No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA41985.0968869894614155No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG37974.6100237968044295No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT37904.601524938079744No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA28473.4566072555971057No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA15241.850322956631538No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA14831.8005439269583798No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT13931.6912728862124229No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG12441.5103686076441165No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT12431.5091544849691612No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA11681.4180952843475305No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG11511.3974551988732942No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT10631.2906124034772473No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA9301.1291340877082219No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT8801.0684279539604682No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC8671.0526443591860521No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT8501.0320042737118158No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA8361.0150065562624446No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT7450.9045213928415328No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7410.8996649021417124No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA7370.894808411441892No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT6770.8219610509445875No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT6760.8207469282696324No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT6740.8183186829197222No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG6350.7709678985964742No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC6230.7563984264970133No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT6010.7296877276480015No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTTACGGCAACATATCAGAAG5580.6774804526249332No Hit
CATAGACACAGGCCAATCTCAGCAGAAGTGTATTAATTATCTATGGCTGC5090.6179884415521344No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT5020.6094895828274489No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT4980.6046330921276286No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTACGGCAACATATCAGAAGC4940.5997766014278083No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA4670.5669952892040211No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTGTCTTCAGCTCTTTGAGGC4490.5451410810548298No Hit
CATAGAGGCACAGGGATAATGAGGGAGATCGAGGAGAATGATATTGTTGC3700.4492253897333787No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC3660.44436889903355836No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGCCCCAGGTAGCAAAAC3540.42979942693409745No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACGGCAACATATCAGA3490.423728813559322No Hit
CATAGATCCCATACTCCTCCATTACCCTGGGTAGAGAGTTCTGTAGATGT3410.4140158321596814No Hit
CATAGAAACAGCAAAGCCCTCCACCACTATGAGCCCCAGGTAGCAAAACA3390.41158758680977126No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTCTCACTGAGCTGAGGGTCACT3310.4018746054101306No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT3250.3945898693604002No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGAGGAATCTTTGGGAGGCTA3130.3800203972609393No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA2980.3618085571366131No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACACTGGGAAAGGTATGT2920.35452382108688263No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTAGACCTTTTTCTGTAGTCAAGTG2710.32902724491282603No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC2680.32538487688796075No Hit
CATAGATCACCAGATGCCAGTTGTGCTACGGCAACATATCAGAAGCATCT2680.32538487688796075No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG2550.30960128211354476No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAAGGAGGAGCTGACT2510.30474479141372446No Hit
CATAGAACCAACCTCTCTATCTCCGTCACTGAGCTGAGGGTCACTTCTAT2430.29503181001408385No Hit
CATAGACCATCCCTTCTACAAGAGGCAGTGTAGAAGTGTATTAATTATCT2410.29260356466417364No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACAATGCCTCACACACAGGTCTAT2380.2889611966393084No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2210.2683211111650721No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT2180.2646787431402069No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2140.2598222524403866No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC2140.2598222524403866No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT2080.2525375163906561No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATAGAGGAGAATGATATTGTTG1980.24039628964110535No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTCTACACATAGGAGGAGCTGACTT1950.2367539216162401No Hit
CATAGATGAGTGTCCTTGTAGATGTGCATTCTCTCAGGGCTGTTCTCTAT1930.23432567626632994No Hit
CATAGAGTGATCCTCCTTTCTCAGCCAGAGTGATCTACAGTTTCAATACT1890.22946918556650964No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTATGTATATCTAGGAGTAGAACT1860.22582681754164438No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGCATTCTCTCAGGGC1840.22339857219173426No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCACTTACTAACAAAGCGCTTCCT1820.2209703268418241No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC1800.21854208149191395No Hit
CATAGACCACACACACAACTGAGAGTGCAATATGGGCTGGGTGATCTATG1690.2051867320674081No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG1650.20033024136758776No Hit
CATAGACCATCCCTTCTACAAGAGGCATTCTCTCAGGGCTGTTCTCTATG1640.19911611869263268No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1610.19547375066776748No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCCATAGACTCTGTTTACTCGGAGA1610.19547375066776748No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG1560.1894031372929921No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT1500.18211840124326162No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT1490.18090427856830654No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1480.17969015589335147No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGGCATTCTCTCAGGG1480.17969015589335147No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCCCCAGGTAGCAAAACAGA1450.17604778786848624No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT1350.16390656111893548No Hit
CATAGAGGTGAGCGGCTGTCTCCATCCAGTCCAGCTCCTTCTATGTGTAG1330.1614783157690253No Hit
CATAGAGGAGAATGATATTGTTGCAGATTTCTATGTGTAGAACCATGTCG1260.15297945704433974No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTTGAAGCAGAGGTAGATGGA1250.1517653343693847No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1220.14812296634451946No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGAAGTGTATTAATTATCTAT1210.1469088436695644No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAGGAGGAGCTGACTTACTGTTCTA1180.14326647564469913No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGTCGT1170.14205235296974406No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTCAGGGCAGAGAGTGTGTTG1140.13840998494487883No Hit
CATAGACACAGGCCAATCTCAGCAGGGCAGAGAGTGTGTTGTATTCTATG1120.13598173959496868No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGCAGAGAGTGTGTTGTATT1100.13355349424505852No Hit
CATAGACCACACACACAACTGAGAGGAGAATGATATTGTTGCAGATTTCT1090.13233937157010345No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCAGCATTC1080.13112524889514837No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1040.12626875819532804No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGGGAAAAGGGATAGGAGG1020.1238405128454179No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACTTATCTGGGCACGGTGGTCTAT1020.1238405128454179No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTACGGTAGCAGGAAAC1020.1238405128454179No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCCATTCTCTCAGGGCTGTTCT1010.12262639017046283No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTATGTGTAGAACCATGT920.11169928609586713No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG920.11169928609586713No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA890.1080569180710019No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTAAGTGTAATAGCCTCTA880.10684279539604682No Hit
CATAGATGGGATTATAGGTGTGAGCCACCCCCGCCTGGCCAAAAATTTCC870.10562867272109173No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCATTTTCTGTTTACTCGGA860.10441455004613666No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG860.10441455004613666No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACACTGACAACAATGCCTCACACA850.10320042737118158No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTGCTCCTTCTCACACAAATCTA850.10320042737118158No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)