FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806804

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806804
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6712
Sequences flagged as poor quality0
Sequence length150
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA259838.70679380214541No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA3304.916567342073898No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC2123.158522050059595No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG2083.098927294398093No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG2012.994636471990465No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG1382.056019070321812No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG1331.9815256257449343No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG1171.7431466030989273No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA761.132300357568534No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG721.0727056019070322No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT660.9833134684147794No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT620.9237187127532777No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA460.6853396901072706No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC450.6704410011918951No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA450.6704410011918951No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT440.6555423122765197No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT430.6406436233611442No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT420.6257449344457688No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG420.6257449344457688No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT390.5810488676996424No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT330.4916567342073897No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC330.4916567342073897No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG280.4171632896305125No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA280.4171632896305125No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT250.37246722288438616No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT230.3426698450536353No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT220.32777115613825986No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG220.32777115613825986No Hit
CATAGATGGGACAGCGACAATGACAGGAATCAATGTTCTATGAGACCAAT210.3128724672228844No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA190.2830750893921335No Hit
CATAGATGCCACCACACCCAGTTAATGTGTAGAACCATGTCGTCAGTGTA190.2830750893921335No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT170.2532777115613826No Hit
CATAGACCAGTTACCACAAGAAGCAATGTGCTCGTATCTTGGCCATCTAT170.2532777115613826No Hit
CATAGACCAGTACGCCTTACCCCTTGTCAGACCCAGGCTACACATCTATG160.23837902264600713No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG150.2234803337306317No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG150.2234803337306317No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG150.2234803337306317No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG150.2234803337306317No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTCACCGCCATGCTGAAGT150.2234803337306317No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT140.20858164481525626No Hit
CATAGACCAGTTACCACAAGAAGCAATGTCGTCAGTGTATGATGGGAGTG140.20858164481525626No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG130.1936829558998808No Hit
CATAGAGGTGAGCGGCTGTCTCCATGTCGTCAGTGTTGTTACAAAAATTG130.1936829558998808No Hit
CATAGAAGTATTCACACTGGGGCCCATAAGCCATGCTGAAGTCCCATGAT120.17878426698450536No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG120.17878426698450536No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT120.17878426698450536No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA110.16388557806912993No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC110.16388557806912993No Hit
CATAGAGGTGAGCGGCTGTCTCCACTGACGCCATGCTGAAGTCCCATGAT110.16388557806912993No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACCCTGGGAGAAGAAA110.16388557806912993No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA110.16388557806912993No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA110.16388557806912993No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGTTACAAAAATTGGGAA110.16388557806912993No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTAGCCATGCTGAAGTCCCATGATC100.14898688915375446No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA100.14898688915375446No Hit
CATAGATTCCTCCAAAGACTGCAGGGGTTGCACCAACATGCTTTTAGTCA100.14898688915375446No Hit
CATAGATCTCCTCTCTGTAATGCACCAGTAGATGGCAAATGATGGGAGTG100.14898688915375446No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA90.13408820023837903No Hit
CATAGAGGTGAGCGGCTGTCTCCATACGGTGCATAAAAACTGTCGGAGGT90.13408820023837903No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTATGAGCATGCCTTTGATAAAAC90.13408820023837903No Hit
CATAGACCAGTTACCACAAGAAGCAATGATGGGAGTGTCTGCTGGTCTAT90.13408820023837903No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT90.13408820023837903No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG80.11918951132300357No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCACACTGACCAACATGC80.11918951132300357No Hit
CATAGATTCCTCCAAAGACTGCAGGGTGGGTTGAGGGAGTCTTCTCTATG80.11918951132300357No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT80.11918951132300357No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT80.11918951132300357No Hit
CATAGATGGTATTTGAGTGGGGAAACAGATGTGCTCGTATCTTGGCCATC80.11918951132300357No Hit
CATAGATCTCCTCTCTGTAATGCACCAGACACTGACGAATGAGGAAACAG80.11918951132300357No Hit
CATAGAGGTGAGCGGCTGTCTCCATGGGTCATTGTGAGGATTAAATGTCT80.11918951132300357No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGACTGTTAATATAGAAGAGACACAC80.11918951132300357No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA80.11918951132300357No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGGGGTCCTAAATGTCTTT80.11918951132300357No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTAGCAGGCCCTTCAGCA70.10429082240762813No Hit
CATAGAATCTGGTTCAAGCACACAGTAAAGGCTGGGGTCTTGGGTCTATG70.10429082240762813No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA70.10429082240762813No Hit
CATAGAACATTGATTCCTGGCATGTCCCTTCCTTTCAATAGCCTTTTAGG70.10429082240762813No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCTGGTCA70.10429082240762813No Hit
CATAGACCCCATGACTCAGCTCCTCATGGGTCATTGTGAGGATTAAATGT70.10429082240762813No Hit
CATAGATGAAGGCAGAAAAGGAAGAACACACTTAGTGGGACAGCATCTGG70.10429082240762813No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGCCATGCTGAAGTCCC70.10429082240762813No Hit
CATAGATGGTATTTGAGTGGGGAAACAGATACGGTAAAGGCTGGGGTCTT70.10429082240762813No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA70.10429082240762813No Hit
CATAGACCAGTACGCCTTACCCCTTGACAGTTGTGGAAAGTGCAATGAGT70.10429082240762813No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)