FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806810

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806810
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11466
Sequences flagged as poor quality0
Sequence length150
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA296525.859061573347287No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA8727.6050933193790335No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG7226.296877725449154No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT3052.6600383743240887No Hit
CATAGACCCTGGATTAGCATGAGGAAGTACACAAAAAGGGCATCTATGGA2922.546659689516832No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT2852.4856096284667712No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT2812.4507238792953077No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG2552.2239665096807952No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA2432.119309262166405No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA2412.101866387580673No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA2231.9448805163090876No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG1881.6396302110587826No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCATTATTATTGGATGGGATCTAT1801.5698587127158554No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACAGGGCAC1701.482644339787197No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAGAAGTCAAATTGTCC1371.1948369091226234No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA1171.0204081632653061No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGTTTTTCTCAGGTTTGTCAAA1130.9855224140938427No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG1020.8895866038723181No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG990.8634222919937204No Hit
CATAGACATGCTAACATTTCTGGGGATACTTGGTCTCATAGACATGCTAA840.7326007326007326No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC830.7238792953078668No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCAACCCCTTAAGAAAATTT640.5581719867434153No Hit
CATAGACCAGACTTTTGAAAGAAGCACATACGGAGCAGGAATTAGACTCT490.4273504273504274No Hit
CATAGACTGCCTCAGCCTCCTGAGTATGTGTAGAACCATGTCGTCAGTGT460.40118611547182975No Hit
CATAGAAAGGCCTTCCTGTATCAGTCATCACTTATACGCCTCCCTGTCTA440.383743240886098No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT440.383743240886098No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCAACATGGTG420.3663003663003663No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGTGTGCAAC400.3488574917146346No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG380.33141461712890286No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAAGTGCCTGCCAC370.32269317983603696No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGACA370.32269317983603696No Hit
CATAGACATGCTAACATTTCTGGGGATACTAACATTACTGGGGACTGTGA340.2965288679574394No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT300.2616431187859759No Hit
CATAGACTGCCTCAGCCTCCTGAGTAACTGGGATTACAGGCACACACCAC290.25292168149311006No Hit
CATAGAAGTTCTGATCCACATTCACGTATGCAGAGACTTGGTCTCATAGA270.23547880690737832No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTTGCTCATTATTATTGGATG240.20931449502878074No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT230.20059305773591488No Hit
CATAGACCCACTTTCGTGACTTTGTGTAGCAGAGACTTGGTCTCATAGAG230.20059305773591488No Hit
CATAGACTGTCATTGCTTGCCCATTGGAGACTTGGTCTCATAGACTGTCA210.18315018315018314No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGCTTGTCAAAGATCA200.1744287458573173No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGTAGCAGGACTTGGTCTCATAGAA190.16570730856445143No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA180.15698587127158556No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGCCAAAGATCA170.1482644339787197No Hit
CATAGACATGCTAACATTTCTGGGGATAGCAGAGACTTGGTCTCATAGAC160.13954299668585382No Hit
CATAGAATCCTTTCCCCATTGCTTGTTGTCTGTGACAGCTTGTATACATC150.13082155939298795No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGTTCA150.13082155939298795No Hit
CATAGATGGAGAGAGTGAGGGAAAGGAGGTTGTCTGGGTGGTTTCTGTCT150.13082155939298795No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTCTCTCAGGTTTGTCAAAGATCA140.1221001221001221No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT140.1221001221001221No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTCGTCAAAGATCA140.1221001221001221No Hit
CATAGAAGCAGGATGAAAACATGGTACATTACTGGGGACTGTGACTCTGT140.1221001221001221No Hit
CATAGACTGTCATTGCTTGCCCATTGGACTGTCATTGCTTGCTCATTATT140.1221001221001221No Hit
CATAGATTGCATAGCCATGTGTAGCCCTAAAGCCCTTGTGAAGTTCTATG130.11337868480725624No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAGTAGTCAAATTGTCC130.11337868480725624No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAGGATCA130.11337868480725624No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCTAT130.11337868480725624No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAGAGATCA130.11337868480725624No Hit
CATAGAATCCTTTCCCCATTGCTTGTTCTTCTCAGGTTTGTCAAAGATCA120.10465724751439037No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCGAAGATCA120.10465724751439037No Hit
CATAGACATGCTAACATTTCTGGGGATTGACTGGGGACTGTGACTCTGTT120.10465724751439037No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAAGCCCTTGTGAA120.10465724751439037No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA120.10465724751439037No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)