FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806811

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806811
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences146885
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA1550010.55247302311332No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG79735.428055962147258No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG64374.382339925792286No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG59834.073254586921742No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC57053.8839908772168705No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG46173.143275351465432No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA44343.018688089321578No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT43392.954011641760561No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT36782.5039997276781154No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG31792.1642781768049835No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA31372.135684378935902No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG26091.7762194914388807No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA22181.5100248493719577No Hit
CATAGAAGGACAAAGACATTTAGGACCCACGCTGTCCTTCTCTGAATCTA22061.5018551928379344No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC21741.4800694420805391No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA18941.2894441229533309No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA18841.2826360758416449No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT17031.1594104231201279No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT16471.1212853592946863No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT15231.0368655751097797No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC14470.9851244170609661No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG13750.9361064778568268No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA13470.9170439459441059No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA13390.9115975082547572No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC12240.833304966470368No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA11920.8115192157129728No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT10620.7230146032610546No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG9390.6392756237873166No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA8800.5991081458283691No Hit
CATAGAAAAAACAGTTGGCCAGGCATTGCTTCTTGTGGTAACTGGTCTAT8100.551451816046567No Hit
CATAGACCAGCAGACACTCCCATCATTCACGCTATACCACACTACACACT7820.5323892841338462No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA7460.5078803145317765No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGCTATACCACACTA7100.4833713449297069No Hit
CATAGACACAACAGAGAGAACGGGCTCCGAGGTCAGGAAGGAACCTGCTC7000.4765632978180209No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA6850.46635122715049193No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACTGACGCTATACCACACTA6600.44933110937127685No Hit
CATAGATGGCCAAGATACGAGCACATACACTGCCCTCTCTGCTGTTCCTT6460.43979984341491646No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG6380.43435340572556763No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG6370.433672601014399No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGCACAAGGGGTAAGGCGTAC6350.4323109915920618No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG5910.40235558430064333No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT5870.399632365455969No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCACACTGCCCTCTCTGCTGTT5780.3935051230554516No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG5730.39010109949960853No Hit
CATAGACCAACATTTCTTCTCCCAGGGTTGGTTCTACAAAGGATTCTGGG5280.3594648874970215No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC5130.34925281682949244No Hit
CATAGAACAGATGTTCTCCTTGTTTTCTATAACCGTAGGTGGAAGGGTAA4860.3308710896279402No Hit
CATAGATCACGTAGAAACTGGAGAGGCACACTGGTGCATTACAGAGAGGA4610.3138509718487252No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCACACTGACGCTATACCACACTA4600.3131701671375566No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA4530.30840453415937635No Hit
CATAGACCCAAGACCCCAGCCTTTACACACTGGCTCAGGTATGTCTTTAT4290.29206522109132993No Hit
CATAGAGAAGACTCCCTCAACCCACCAGTCACGAGTTTTGTCATGCCCTA4050.2757259080232835No Hit
CATAGAAGGACAAAGACATTTAGGACCCCACTGACGATCATTGTTCACTG4040.2750451033121149No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA3930.2675562514892603No Hit
CATAGATCAAGGAAAACACCAGCCCAAGGGGTAAGGCGTACTGGTCTATG3900.2655138373557545No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT3870.2634714232222487No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG3840.2614290090887429No Hit
CATAGAGAAGACTCCCTCAACCCACCATTCAGGTCTACCAGTTATTAGTT3810.2593865949552371No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT3660.24917452428770806No Hit
CATAGAGAAGACTCCCTCAACCCACCACGCTGTCCTTCTCTGAATCTATG3540.24100486775368485No Hit
CATAGACCAGCAGACACTCCCATCATTCAGACTGTCCCAACTGTCTCTGA3530.24032406304251627No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTATGTGTCTACAAAGGATTCTG3530.24032406304251627No Hit
CATAGACCAGCAGACACTCCCATCATCAGCAGCATAATTTCCCATGTCAT3510.23896245362017904No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT3450.23487762535316742No Hit
CATAGACCTAAAAGGCTATTGAAAGGAAGGGTGGAAGGGTAAGAGAGGGT3440.23419682064199887No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGACGACATGGGCCCCAG3370.22943118766381865No Hit
CATAGATGTTTTATCAAAGGCATGCTCATGCACTGACGATCATTGTTCAC3310.22534635939680703No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGGCTCAGGTATGTCTTTAT3310.22534635939680703No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGGAGACAGCCGCTCACCTC3270.22262314055213261No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT3170.21581509344044658No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC2880.19607175681655717No Hit
CATAGATGTGTAGCCTGGGTCTGACACCGTACATTGCTTCTTGTGGTAAC2740.18654049086019675No Hit
CATAGACATTTAATCCTCACAATGACCCATGTCGTAGTGTCATTTATTTT2680.18245566259318516No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACACTGACGATCATTGTT2620.17837083432617354No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGACGACATGGGTCTACC2560.17428600605916195No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT2510.17088198250331893No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG2380.16203152125812711No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT2370.1613507165469585No Hit
CATAGATCATGGGACTTCAGCATGGCAAATGCTGAAGTGATGGGCTAGAT2340.1593083024134527No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACCCACAGCCAGGAAAGAAT2280.15522347414644108No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCGTCCCAACTGTCTCTGAA2260.15386186472410388No Hit
CATAGACTTGAAAGTGATAACTGAGAGGTAAACACACTGACGACATGGGT2210.1504578411682609No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT2200.14977703645709228No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG2180.14841542703475508No Hit
CATAGATCACGTAGAAACTGGAGAGGCACACTGACGACATGGGTCTACCA2150.1463730129012493No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGACATGGTCTACCAGT2090.14228818463423767No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT2010.13684174694488888No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGTCATTGTCGCT1990.13548013752255167No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG1970.13411852810021443No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG1950.13275691867787726No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGAACAAGGGGTAAGGCG1940.13207611396670865No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTACACTGACGCTATACCACAC1880.12799128569969703No Hit
CATAGATGTGTAGCCTGGGTCTGACACACACACACACACGCTATACCACA1860.12662967627735985No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTCTGTCATTGTCGCTGTCC1750.11914082445450523No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTACACTGACGACATGGCTCAGGT1740.11846001974333661No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGGACATGCCAGGAATCAA1740.11846001974333661No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1700.11573680089866221No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACCGTACACCCACAGCCAGGAAA1610.10960955849814481No Hit
CATAGAAATGATGCTGAAGGGTCTGTTTCCCCACTCAAATACCATCTATG1550.1055247302311332No Hit
CATAGATGTGTAGCCTGGGTCTGTCATTGTCGCTGTCCCATCTATGAGAC1510.10280151138645878No Hit
CATAGACGTGACTAAAAGCATGTTGGTGTTTGCAGATTTGGACCTGCGAG1500.10212070667529019No Hit
CATAGACCAACATTTCTTCTCCCAGGGTTTCTTCTCCCAAGTATTAGAGC1490.1014399019641216No Hit
CATAGACGTGACTAAAAGCATGTTGGTCTACCAGTTATTAGTTGAATGAG1480.10075909725295298No Hit
CATAGACGGATTATTCTCTCCATGGTCTACACTGCCCTCTCTGCTGTTCC1470.1000782925417844No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)