FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences146885
Sequences flagged as poor quality0
Sequence length150
%GC37

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT1528610.40678081492324No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG78285.329339279027811No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG61994.220308404534159No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA60124.0929979235456315No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG56653.856758688770126No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG45783.1167239677298566No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC43592.967627735983933No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT42462.890696803621881No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT36072.455662593185145No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG31212.1247915035572045No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA30902.103686557510978No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG25361.7265207475235727No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA22121.505940021104946No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTCCTAAATGTCTTTGTCCTTCTA21731.4793886373693705No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC21331.4521564489226266No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA18491.2588079109507437No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT18471.2574463015284065No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT16131.0981379991149538No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG15181.033461551553937No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT14891.0137182149300472No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT14821.0089525819518672No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC14580.9926132688838206No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG13650.9292984307451407No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT13550.9224903836334548No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT13160.8959389998978794No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC11890.809476801579467No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT11750.7999455356231064No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT10280.6998672430813221No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAATCCTGTGTTCATGGCTTCTATG9210.6270211389862818No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACCCTGGGAGAAGAAAT8430.5739183715151309No Hit
CATAGACCAGTTACCACAAGAAGCAATGCCTGGCCAACTGTTTTTTCTAT7930.5398781359567009No Hit
CATAGAGGGGCCTGGTTATTACTTGGATGGGAGCCAGAGCCTGGCCTGAG7480.5092419239541137No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTGAATGATGGGAGTGTCTGCTGGT7470.5085611192429452No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT7300.49698743915307897No Hit
CATAGACCCCATGACTCAGCTCCTCAATCCTGTGTTCATGGCTTCTATGT6960.47384007897334646No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGGGTCCTAAATGTCTTT6940.4724784695510093No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTATGTGCTCGTATCTTGGCCAT6520.4438846716819281No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTCTGAGAAAAGATGCAGT6400.4357150151479049No Hit
CATAGACCCCATGACTCAGCTCCTCACTCTCCCACCATTCAGACTCTATG6400.4357150151479049No Hit
CATAGACCAGTACGCCTTACCCCTTGTGCACTGTCATTGTGGGTTTTAAC6170.420056506791027No Hit
CATAGACCTCCCATGGTTCCTGATGATGGGAGTGTCTGCTGGTCTATGTG6130.41733328794635255No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC5790.39418592776662015No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGATGAGCATGCCTTTGATAAA5780.3935051230554516No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCATTAGGAAGTCTTCTCAGCTT5750.3914627089219458No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG5560.37852741940974227No Hit
CATAGATGGCCCAGAATCCTTTGTAGAACCAACCCTGGGAGAAGAAATGT5190.3533376450965041No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG5070.3451679885624808No Hit
CATAGACCCTCTCTTACCCTTCCACCTACGGTTATAGAAAACAAGGAGAA4890.332913503761446No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTACGAATGAGGAAACA4460.3036389011811962No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGCATTAGGAAGTCTTCT4440.302277291758859No Hit
CATAGATCTCCTCTCTGTAATGCACCAGTGTGCCTCTCCAGTTTCTACGT4420.3009156823365218No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTGTAAAGGCTGGGGTCT4090.2784491268679579No Hit
CATAGAAGGAAGTAGGGCATGACAAAACTCGTGACTGGTGGGTTGAGGGA3980.27096027504510334No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGGGGTCCTAAATGTCTTT3970.2702794703339347No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT3780.2573441808217313No Hit
CATAGACCAGTACGCCTTACCCCTTGGGCTGGTGTTTTCCTTGATCTATG3780.2573441808217313No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCTGAATGGTGGGTTGAGG3750.2553017666882255No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG3700.25189774313238245No Hit
CATAGATGGCCCAGAATCCTTTGTAGACACATAGACCAACATGCTTTTAG3570.24304728188719063No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT3570.24304728188719063No Hit
CATAGACCCTCTCTTACCCTTCCACCCTTCCTTTCAATAGCCTTTTAGGT3380.23011199237498725No Hit
CATAGATTCAGAGAAGGACAGCGTGGTGGGTTGAGGGAGTCTTCTCTATG3380.23011199237498725No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACAGTTGTGGAAAGTGC3380.23011199237498725No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGCATGAGCATGCCTTTGA3350.22806957824148144No Hit
CATAGATGACATGGGAAATTATGCTGCTGATGATGGGAGTGTCTGCTGGT3350.22806957824148144No Hit
CATAGAAGTATTCACACTGGGGCCCATGTCGTCAGTGTGGGTCCTAAATG3310.22534635939680703No Hit
CATAGAGCTAATAAAGACATACCTGAGCCAGTGTAGCCCGTTCTCTCTGT3270.22262314055213261No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTACGAATGAGGAAACAGGCACTC3230.21989992170745823No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTCTGAATGATGGGAGTGTC3150.2144534840181094No Hit
CATAGACCAGTTACCACAAGAAGCAATGTACGGTGTCAGACCCAGGCTAC2740.18654049086019675No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACAGTTGTGGAAAGTG2730.18585968614902815No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGACACTACGACATGGGTCAT2620.17837083432617354No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTACACTGTCATTGTGGG2590.17632842019266773No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTAGA2580.17564761548149915No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG2410.16407393539163292No Hit
CATAGATCTAGCCCATCACTTCAGCATTTGCCATGCTGAAGTCCCATGAT2360.1606699118357899No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG2320.1579466929911155No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT2290.15590427885760968No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT2280.15522347414644108No Hit
CATAGATTCTTTCCTGGCTGTGGGTGTGGGTCCTAAATGTCTTTGTCCTT2250.1531810600129353No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTGTT2180.14841542703475508No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGTCGTCAGTGTATGT2090.14228818463423767No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG2070.14092657521190047No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA2050.13956496578956326No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCCATGTCGTCAGTGTGCC2040.13888416107839466No Hit
CATAGATGGGACAGCGACAATGACAGTGTGACTGTTAATATAGAAGAGAC1990.13548013752255167No Hit
CATAGATCTAGCCCATCACTTCAGCACTCTCCCACCATTCAGACTCTATG1980.13479933281138307No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACGAGACAGTTGTGGAAAGTGCA1950.13275691867787726No Hit
CATAGACCAGTACGCCTTACCCCTTGTTCAGAGACAGTTGTGGAAAGTGC1940.13207611396670865No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG1920.13071450454437145No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG1900.12935289512203424No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTACTGTCATTGTGGGTTT1830.12458726214385403No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTAACAACAA1820.12390645743268543No Hit
CATAGAACATTGATTCCTGGCATGTCCACACTGACGAATGAGGAAACAGG1790.12186404329917963No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTGTGTGTGTGTGTGTCAGACCCAG1720.11709841032099944No Hit
CATAGATGGGACAGCGACAATGACAGACACTGTCATTGTGGGTTTTAACT1720.11709841032099944No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA1640.11165197263165061No Hit
CATAGATTCTTTCCTGGCTGTGGGTGTACGGTAGCAGGCCCTTCAGCATC1600.10892875378697622No Hit
CATAGATGGGACAGCGACAATGACAGACCCAGGCTACACATCTATGTGTA1500.10212070667529019No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACCCTTCAGCATCATTTCTATG1500.10212070667529019No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTAGACCATGGAGAGAATAATCC1470.1000782925417844No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)