FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806815

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806815
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121535
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC101708.367959846957666No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC81106.67297486320813No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA78386.449171020693627No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA70125.769531410704736No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA47733.927263751182787No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT46823.852388200929773No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA39223.2270539350804297No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT32532.676595219484099No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA32392.6650759040605587No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT30732.5284897354671494No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA25512.098983831817995No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA22781.874357181058954No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT18271.503270662772041No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC17681.4547249763442631No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG16071.3222528489735466No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC13791.1346525692187435No Hit
CATAGATTTGGCACTCACATACACGCATGGTTCCAACTCTATAGATTATG11640.9577487966429423No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA11010.9059118772370099No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG10950.9009750277697782No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC10930.8993294112807011No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA10880.8952153700580079No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT10750.884518862879006No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT10120.8326819434730737No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG9980.821162628049533No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA9480.7800222158226024No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT9420.7750853663553708No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG9350.7693257086436006No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA7760.6384991977619616No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC7720.6352079647838071No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA7640.6286254988274983No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA7100.5841938536224134No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA7100.5841938536224134No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG6470.5323569342164809No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT6460.5315341259719423No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG6280.5167235775702472No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA6110.5027358374130908No Hit
CATAGACAGTCCTGCCGTGTACATGTGCCCTGTGATTGTCCTGGTCTATG6040.4969761797013206No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA5550.45665857571892865No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTGATCATCCATTGTCTGCTCTAT5190.4270374789155387No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG5160.4245690541819229No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA4980.40975850578022793No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG4940.4064672728020735No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT4750.3908339161558399No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC4370.3595672028633727No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT4210.34640227095075493No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG4210.34640227095075493No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGTGGGAGGAACAGGGAGATGTT4170.34311103797260045No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT4080.335705763771753No Hit
CATAGATTGCCTCATTGTGCCAGACAAGCACATTATTATTGGTTGGTTCT4030.33159172254905994No Hit
CATAGAACTTGTGCTTTTGGTGTCACTGGTGGTGCTGGAACTAGTTCTAT3870.31842679063644214No Hit
CATAGATGCACCAGAAGCCACCTACCGTAACTCCAGTCTCGGCAACAAGT3790.3118443246801333No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT3640.29950220101205416No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC3590.29538815978936106No Hit
CATAGAACTGAGGCTGGTAGAGGGAGCCTTGGAGGCCTAGCCTGGCAGCT3420.28140041963220475No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT3390.2789319948985889No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCTCTCTTCCGCCTTTATCCTTCTAT3360.2764635701649731No Hit
CATAGATGCACCAGAAGCCACCTACCGTACTTAGGAGTTCTGGCCCCTGT2770.22791788373719507No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG2740.2254494590035792No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA2700.22215822602542476No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA2670.21968980129180893No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2650.21804418480273172No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCACGCTGACATCCCAACCACACG2650.21804418480273172No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGCCTTCTCTGATACCATC2620.2155757600691159No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA2230.1834862385321101No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2200.18101781379849427No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG2160.17772658082033982No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGGAAAATGTCAGTGGGCCATCTA2160.17772658082033982No Hit
CATAGAAAAGTCACCATGCAGCCCTGGTGGTGCTGGAACTAGTTCTATGA2010.16538445715226066No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGTCCATTTTTGGTTCTCTTCTAT2010.16538445715226066No Hit
CATAGACCCACTTACACACACAGGTTTTCCGGCTTGAGGTTCTATGAGAC1990.16373884066318345No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA1990.16373884066318345No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG1960.16127041592956762No Hit
CATAGAATCACTTGAGTTTGTAAAAGCAGATCACTTGATCATCCATTGTC1880.15468794997325871No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA1840.1513967169951043No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT1830.1505739087505657No Hit
CATAGATGTCCCCATTCATCCTGCAACAGGGCAAGTGTATGGTCAGTTCT1700.13987740157156375No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT1590.13082651088163905No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCTACCGTAACAATGGGCACACTT1560.12835808614802321No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT1530.12588966141440738No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC1530.12588966141440738No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT1500.12342123668079154No Hit
CATAGATTTGGCACTCACATACACGCTGACATCCCAACCACACGTCTATG1430.11766157896902127No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC1410.11601596247994406No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGCCCCTTCATTTTGCTGGAA1400.11519315423540544No Hit
CATAGATGTGTGAGAGAGGGAGAGACACCACAGCCCAGTTTTCCTTCTCT1370.1127247295017896No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA1350.11107911301271238No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA1350.11107911301271238No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT1340.11025630476817379No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGGAACAAGGGCATGGTCAAG1230.10120541407824905No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA1230.10120541407824905No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)