FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806816

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806816
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121535
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG105318.664993623236104No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG80456.61949232731312No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT78756.479614925741556No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT71415.8756736742502165No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT48333.9766322458551038No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT46033.787386349611223No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT38823.194141605298885No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT34512.839511251902744No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT32402.6658987123050975No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT32372.6634302875714817No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT25302.081704858682684No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT22831.8784712222816473No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG17791.4637758670341876No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT17711.4571934010778786No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG16211.3337721643970872No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG14811.2185790101616818No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAACCATGCGTGTATGTGAGT11840.9742049615337145No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG11170.9190768091496276No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC10950.9009750277697782No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT10850.8927469453243921No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC10750.884518862879006No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT10710.8812276299008517No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT10080.8293907104949192No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG9940.8178713950713786No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT9590.7890731065125273No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG9480.7800222158226024No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT9360.7701485168881392No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA7830.6442588554737319No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT7570.622865841115728No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT7100.5841938536224134No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT7060.5809026206442589No Hit
CATAGAACTGTCCCCTACTTTTCACCAAGGTCAAGGGCAGGGATTCTATG6620.5446990578845601No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC6470.5323569342164809No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT6330.5208376187929403No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA6090.5010902209240137No Hit
CATAGACCAGGACAATCACAGGGCACATGTACACGGCAGGACTGTCTATG6090.5010902209240137No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT5440.44760768502900394No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA5290.4352655613609248No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT5220.42950590364915453No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC5180.4262146706710001No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT5000.4114041222693051No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG4960.4081128892911507No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC4350.35792158637429544No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG4300.3538075451516024No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT4190.3447566544616777No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT4170.34311103797260045No Hit
CATAGAACATCTCCCTGTTCCTCCCACATGTCTCTCCCTCTCTCACACAT4150.34146542148352327No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC3950.32500925659275104No Hit
CATAGAACTAGTTCCAGCACCACCAGTGACACCAAAAGCACAAGTTCTAT3910.3217180236145966No Hit
CATAGACTTGTTGCCGAGACTGGAGTTACGGTAGGTGGCTTCTGGTGCAT3760.30937589994651743No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3710.3052618587238244No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC3630.29867939276751554No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT3490.287160077343975No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT3410.2805776113876661No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCAGCTCCTCTTCTCTTCCCTCTAT3270.26905829596412556No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTAGGTGGCTTCTGGTGCAT2730.22462665075904062No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG2670.21968980129180893No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC2660.21886699304727036No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2650.21804418480273172No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGCATTCTTTCTCCAGACCTTCA2610.21475295182457727No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTACGGTTGCAGGATGAATGGGGA2580.21228452709096146No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2320.1908915127329576No Hit
CATAGATGGCCCACTGACATTTTCCTGTCTCTCCCTCTCTCACACATCTA2230.1834862385321101No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA2210.1818406220430329No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2170.17854938906487844No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2110.17361253959764675No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT2030.16703007364133787No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG1980.16291603241864483No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT1970.16209322417410624No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA1960.16127041592956762No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG1950.160447607685029No Hit
CATAGAGCAGACAATGGATGATCAAGTGATCTGCTTTTACAAACTCAAGT1850.1522195252396429No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1760.14481425103879542No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT1690.13905459332702513No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC1670.13740897683794792No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT1610.13247212737071626No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTACGGTAGCAGTTAGGCTACTTG1580.13000370263710043No Hit
CATAGATGGGTCCCATTCTGTTTGCATTCTTTCTCCAGACCTTCATCTAT1540.12671246965894598No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT1540.12671246965894598No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG1530.12588966141440738No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG1410.11601596247994406No Hit
CATAGAGTTCCAGCAAAATGAAGGGGCATAGACACTTGAAAGCTCCCTGG1390.11437034599086683No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC1390.11437034599086683No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA1380.11354753774632821No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT1350.11107911301271238No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGTCTCTCCCTCTCTCACACATCT1320.10861068827909656No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT1320.10861068827909656No Hit
CATAGACACTTGACCATGCCCTTGTTCCATAGACACTTGAAAGCTCCCTG1240.10202822232278767No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT1220.10038260583371045No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)