FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806817

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806817
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences105276
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT73126.9455526425776055No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA63856.06501006877161No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG62285.915878262851932No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAGAACATTAGCTTAGTTA48784.633534708765531No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA46354.402712869029978No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA41823.97241536532543No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG38353.6428055777195185No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT27952.65492609901592No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG27132.577035601656598No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA23692.2502754663931No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA19441.846574717884418No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA16661.5825069341540332No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA16651.5815570500398952No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT13741.3051407728257154No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA12611.1978038679281129No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT11181.061970439606368No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC11101.0543713666932635No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA11091.0534214825791253No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT10761.0220753068125688No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG8560.8131008017021925No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC7610.7228618108590752No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT7180.6820167939511379No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG7040.6687184163532048No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT6780.6440214293856149No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT6730.6392720088149246No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA6420.6098256012766442No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA6160.5851286143090543No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG5760.5471332497435313No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC5660.5376344086021506No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAACTTAGCAACCTGTACAT5630.5347847562597363No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTCTTGTAGAAGGGATGGTCTATG5500.5224362627759414No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTTACACATAGAACAGCTA5150.48919031878110875No Hit
CATAGACCTGTGTGTGAGGCATTGTTCTGCTGAGATTGGCCTGTGTCTAT4760.45214483832972374No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA4630.43979634484592883No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTACGGAGATAGAGAGGTTGGT4360.41414947376420075No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA4330.41129982142178656No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT4120.391352255024887No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG4090.3885026026824728No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA3850.36570538394315893No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT3760.35715642691591626No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC3710.35240700634522587No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTAGAACAGCTAAAAATCT3650.34670770166039744No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA3590.34100839697556895No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA3560.33815874463315476No Hit
CATAGACTCTGTTTTGCTACCTGGGGGACATGTGTGAGAGGGAAGGACTC3480.3305596717200502No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3440.3267601352634979No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG3290.31251187355142673No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACATAGAACAGCTAAAAATC3190.30301303241004596No Hit
CATAGATGCTTCTGATATGTTGCCGTAACAGTGAAACAAGATCGTGCCTC3090.29351419126866524No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA3060.290664538926251No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTACGA3060.290664538926251No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT3040.28876477069797485No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC3000.2849652342414225No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG2900.2754663931000418No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTCTTGTAGAAGGGATGGTCTA2850.2707169725293514No Hit
CATAGACTCTGTTTTGCTACCTGGGGGACATGGTGGAGGGCTTTGCTGTT2680.25456894258900414No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA2500.2374710285345188No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2450.23272160796382843No Hit
CATAGACCTGTGTGTGAGGCATTGTTACTAGACATGTGTGAGAGGGAAGG2430.23082183973555226No Hit
CATAGAGCCTCCACTCTTCTCGCTATCCAGATCCTTGTCAACTCTTGGTC2380.22607241916486187No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2360.22417265093658575No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCTCATTATCCCTGTGCCTCTAT2350.22322276682244765No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACTCGAGGCAGAGGACAGGTATC2330.2213229985941715No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTGGGGAAAGAGAGCACTCTA2320.22037311448003344No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTATAGGGTGGGGAAAGAGAGC2280.21657357802348115No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACTCTCAGTTGTGTGTGTGGT2220.21087427333865266No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGACACTTTGGACTCTGCCTCT2210.2099243892245146No Hit
CATAGATGCTTCTGATATGTTGCCGTATCGATGCTCAGATCTCAAAAGGC2180.20707473688210037No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGTGTGAGAGGGA2160.20517496865382423No Hit
CATAGATGCTTCTGATATGTTGCCGTACAGGTGCAAATTGTCAGTGTGTC2140.2032752004255481No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTAATGGAGGAGTATGGGATC2030.19282647517002927No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTATTGCACAACTGGCA2020.1918765910558912No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTACGAG1970.1871271704852008No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCCTTGGAGAGAAATGCTGCTCTA1960.18617728637106273No Hit
CATAGATGATCCATCTACCTCTGCTTCAGTGTAGGGTGGGGAAAGAGAGC1910.18142786580037235No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA1910.18142786580037235No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTAATGGAGGAGTATGGG1890.1795280975720962No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1880.17857821345795813No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGCACAACTGGCATCTGGTGA1860.17667844522968199No Hit
CATAGACCTGTGTGTGAGGCATTGTTGTCAGTGTAGGGTGGGGAAAGAGA1860.17667844522968199No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCAACTTAGCAACCTGTA1860.17667844522968199No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGGTAGCACAACTGGCATCTGG1810.1719290246589916No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGAGACAGCCGCTCACCTCTATGA1800.17097914054485353No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG1760.1671796040883012No Hit
CATAGATGCTTCTGATATGTTGCCGTTGCCTTTCCTCAGTTCTTTTTCTA1740.1652798358600251No Hit
CATAGACTCTGTTTTGCTACCTGGGGGCTCTATGGCTGAGAAAGGAGGAT1730.164329951745887No Hit
CATAGACCCCATGTGCAGTGTAAGCTACCGTAGCAAACTAACACAGAAAC1700.16148029940347278No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTACGAG1700.16148029940347278No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT1690.1605304152893347No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCAAACTAACACAGAAACAG1680.15958053117519663No Hit
CATAGAATACAACACACTCTCTGCCCTGCTGAGATTGGCCTGTGTCTATG1670.15863064706105853No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA1660.1576807629469205No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCGAGGCAGAGGACAGGTATCTATG1650.1567308788327824No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1650.1567308788327824No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGACCAAAGCTAGAAACTCCCA1650.1567308788327824No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAC1640.15578099471864432No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGTCATTCTTCTCTGGGGGCTCT1620.15388122649036817No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC1550.14723203769140164No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1540.14628215357726357No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG1520.14438238534898742No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1510.14343250123484935No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACGGACTACAAGTACCCACCAC1510.14343250123484935No Hit
CATAGAGAACAGCCCTGAGAGAATGCACACTGACGACATGTGTGAGAGGG1510.14343250123484935No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACGGACTACAAGTACCCACCAC1500.14248261712071125No Hit
CATAGATGTGCCACATACCTTTCCCAGTCTCATACAGTGAAACAAGATCG1500.14248261712071125No Hit
CATAGAATACAACACACTCTCTGCCCTGCACGGACTACAAGTACCCACCA1470.13963296477829704No Hit
CATAGAAGGAGCTGGACTGGATGGACAATAGGGTAATGGAGGAGTATGGG1420.13488354420760668No Hit
CATAGATTTGTGTGAGAAGGAGCAAGATAGGGTGGGGAAAGAGAGCACTC1400.13298377597933053No Hit
CATAGATGATCCATCTACCTCTGCTTCATAGAGAACAGCTAAAAATCTTG1400.13298377597933053No Hit
CATAGACCTGTGTGTGAGGCATTGTTTATGTTGCCTTTCCTCAGTTCTTT1390.13203389186519243No Hit
CATAGAACATCTACAGAACTCTCTACCCACACTGCCTCTTGTAGAAGGGA1360.12918423952277822No Hit
CATAGAACATCTACAGAACTCTCTACCCACACGGACTACAAGTACCCACC1360.12918423952277822No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT1350.12823435540864014No Hit
CATAGAGAACAGCCCTGAGAGAATGCAGAGAACAGCTAAAAATCTTGGAG1340.12728447129450207No Hit
CATAGATGTGGTCTCAGTGCCCTATGACAGTGAAACAAGATCGTGCCTCT1340.12728447129450207No Hit
CATAGATCACCCAGCCCATATTGCAGCAACAAAAGTCACTCCTCTATGAG1300.12348493483794977No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGGTAATGGAGGAGTATGGGATC1280.12158516660967361No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTACGGTAGCAAACTAACACAGAAA1270.12063528249553555No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA1270.12063528249553555No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACATTAGCTTAGTTAATTAGGG1270.12063528249553555No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGTTCACTCTGATGGTACTTCT1270.12063528249553555No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGTCTGGTGGAGGGCTTTGCTG1260.11968539838139747No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1240.11778563015312131No Hit
CATAGATGATCCATCTACCTCTGCTTCAACACGGACTACAAGTACCCACC1230.11683574603898325No Hit
CATAGATGTGCCACATACCTTTCCCACACGGACTACAAGTACCCACCACC1220.11588586192484515No Hit
CATAGAACATCTACAGAACTCTCTACCCACATGTGTGAGAGGGAAGGACT1170.11113644135415479No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATTTACTGACATGGGCAATTCG1080.10258748432691212No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)