FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806822

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806822
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences128048
Sequences flagged as poor quality0
Sequence length150
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG88456.907565912782706No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT80636.2968574284643255No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT71735.601805572910159No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG55414.3272835186804945No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT42863.3471823066350117No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT40253.143352492815194No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT25141.9633262526552544No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT24241.8930401099587653No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT22631.7673060102461577No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG17091.3346557540922155No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG17061.3323128826689992No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT16701.3041984255904036No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT15111.18002624015994No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT14991.170654754467075No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT14661.1448831688116956No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG14611.1409783831063351No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT12420.9699487692115457No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC12110.9457390978383107No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT10980.8574909408971636No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT10820.8449956266400099No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT10520.821566912407847No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT10200.79657628389354No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG10060.7856428839185305No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT9440.7372235411720605No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG9370.7317568411845558No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA8000.6247657128576783No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC8000.6247657128576783No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA7700.6013369986255154No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGCAGCAAACAATTTCAGAAAGTC7680.5997750843433712No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCATAGATGTGGTTGCATGGGGGT6980.5451080844683244No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT6770.5287079845058104No Hit
CATAGACAATTTCAGTGCGGCCGATGTACGGTTGCAGGATGAATGGGGAC6400.4998125702861427No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT6110.4771648131950519No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG6110.4771648131950519No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC6000.4685742846432588No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTGTATCCCAGTTAGGCTACT5840.4560789703861052No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTAGGTGGCTTCTGGTGCA5500.4295264275896539No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT5240.4092215419217793No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGCAGTTAGGCTACTTGG5060.39516431338248154No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTGTACAGTTAGGCTACTTGGGGG5030.39282144195926527No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT5010.3912595276771211No Hit
CATAGAACTAGTTCCAGCACCACCAGTTAGGCTACTTGGGGGTCTCTATG4960.38735474197176056No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC4920.38423091340747223No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT4900.382668999125328No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG4840.3779832562788954No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG4660.36392602773959765No Hit
CATAGACCAGGACAATCACAGGGCACCAAGGTCAAGGGCAGGGATTCTAT4550.35533549918780455No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4480.3498687992002999No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT4330.3381544420842184No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC4280.3342496563788579No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA4220.32956391353242537No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT4190.32722104210920905No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTAGAATCTTGAACTCAGGAGTCT4080.31863051355741595No Hit
CATAGAACTAGTTCCAGCACCACCAGAGTGGGAGTCATTCATGATCTATG3910.3053542421591903No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAATAGATGTGGTTGCATGGGGGTC3780.29520179932525303No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC3730.2912970136198925No Hit
CATAGAGTTCCAGCAAAATGAAGGGGCCATGCTGAAGTCCCATGATCTAT3600.2811445707859553No Hit
CATAGACACTTGACCATGCCCTTGTTCTATGTGGCGTGTATGTGAGTGCC3550.27723978508059477No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATAGGAGTTGACAAACGACAGCT3550.27723978508059477No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC3500.2733349993752343No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTAGATGTGGTTGCATGGGGGTCT3480.2717730850930901No Hit
CATAGAACTAGTTCCAGCACCACCAGTACGGTTGCAGGATGAATGGGGAC3430.2678682993877296No Hit
CATAGAACTGACCATACACTTGCCCTTCTATGTGCTAACTTCGCCTGCCT3360.2624015994002249No Hit
CATAGAACCTCAAGCCGGAAAACCTTGGGTAGAATCTTGAACTCAGGAGT3360.2624015994002249No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAAGCAGCAAACAATTTCAGAAAGT3350.2616206422591528No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC3330.26005872797700863No Hit
CATAGAAGGGGTGATGCTCTGATGGATAGTTGGGTGCTGAAGGATAGTTG3330.26005872797700863No Hit
CATAGAACTAGTTCCAGCACCACCAGACACTTGAAAGCTCCCTGGATCTA3300.2577158565537923No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT3270.25537298513057605No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3270.25537298513057605No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT3250.2538110708484318No Hit
CATAGACACTTGACCATGCCCTTGTTCTAGACACTTGAAAGCTCCCTGGA3170.24756341371985507No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT3110.24287767087342246No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTCCAAGGTCAAGGGCAGGGATTC3090.24131575659127827No Hit
CATAGACAGGGGCCAGAACTCCTAAGTGCACAGTTTGGAATGACTCTATG3050.23819192802698985No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCTGAGAAGGTAGGTGGCTTCTG3030.23663001374484566No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT2950.2303823566162689No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATGTTTGCTATTACGAGGA2870.22413469948769213No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC2860.22335374234662003No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2860.22335374234662003No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC2740.2139822566537548No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTTGTCCTCTTCACCT2680.20929651380732225No Hit
CATAGATGGCCCACTGACATTTTCCTTACGGTTGCAGGATGAATGGGGAC2670.20851555666625016No Hit
CATAGACCAGGACAATCACAGGGCAGGGCTGCATGGTGACTTTTCTATGT2650.20695364238410596No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA2640.2061726852430339No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTGACTTGGTCTTATGACTTTA2620.20461077096088964No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT2510.19602024240909657No Hit
CATAGACAGGGGCCAGAACTCCTAAGGTCTCATAGACAGGGGTGTGGTGT2490.19445832812695238No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC2460.19211545670373611No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA2430.1897725852805198No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGCCGGAAAACCTGTGTGTGTA2370.1850868424340872No Hit
CATAGAACCTCAAGCCGGAAAACCTTGTCGTCAGTGTGCCAAGTAAGTCT2360.18430588529301511No Hit
CATAGATGGCCCACTGACATTTTCCTACGGTTGCAGGATGAATGGGGACA2350.18352492815194302No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG2330.18196301386979882No Hit
CATAGATGGCCCACTGACATTTTCCTTCTCTATGGTCTAGGATGAGATAA2300.17962014244658253No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT2290.17883918530551043No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2250.17571535674122205No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT2240.17493439960014995No Hit
CATAGAACTGTCCCCTACTTTTCACCAGAACTTTCCCACCGCCCTTTTCT2170.16946769961264527No Hit
CATAGACACTTGACCATGCCCTTGTTCAGACACTTGAAAGCTCCCTGGAT2150.16790578533050107No Hit
CATAGACGTGTGGTTGGGATGTCAGCGGTCTCATAGATGTGGTTGCATGG2120.16556291390728478No Hit
CATAGAACTCTTACCCTTTTGCCAGGACACTGAACGAAATTTAGGTGAGC2090.16322004248406846No Hit
CATAGACAGGGGCCAGAACTCCTAAGACAGGGGTGTGGTGTTCTGTCTAT2070.16165812820192427No Hit
CATAGAGAAGGAAAACTGGGCTGTGGGTCCCAAAGTAGGCAATTCTATGT2040.15931525677870798No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGACTCAGGGCTGCATGGTGACTT2000.1561914282144196No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGACCAGGGCTGCATGGTGACTTT2000.1561914282144196No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATAGACAGGGGTGTGGTGTTCTGT1980.1546295139322754No Hit
CATAGAGCAGACAATGGATGATCAAGTGATCTGCTTTTACAAACTCAAGT1950.1522866425090591No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG1930.1507247282269149No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTACGGTAGGTGGCTTCTG1930.1507247282269149No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCGTCAGTGTGTCTAGGATGA1880.14681994252155442No Hit
CATAGATCCATGGTGTGCAAGGACAAGATCCATGGTGTGCACAGGACATT1860.14525802823941023No Hit
CATAGAAGAGAACCAAAAATGGACCCAAGGTCAAGGGCAGGGATTCTATG1810.14135324253404974No Hit
CATAGAACATCTCCCTGTTCCTCCCAACACTGTCTGGCACAATGAGGCAA1710.13354367112332874No Hit
CATAGAACTCTTACCCTTTTGCCAGGGAACAGAGTGGGAGTCATTCATGA1710.13354367112332874No Hit
CATAGAACTGACCATACACTTGCCCTGTTGCAGGATGAATGGGGACATCT1600.12495314257153567No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG1590.12417218543046359No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTGTAGGAGTTGACAAACGACA1580.12339122828939149No Hit
CATAGAGGCCATTCTTCTCATGCTGGTTGCAGGATGAATGGGGACATCTA1560.12182931400724728No Hit
CATAGAACCTCAAGCCGGAAAACCTGTGTGTGTAAGTGGGTCTATGTGTA1560.12182931400724728No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTAAAGCAGCAAACAATT1550.12104835686617518No Hit
CATAGACAATTTCAGTGCGGCCGATGGGTCCCAAAGTAGGCAATTCTATG1490.1163626140197426No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT1490.1163626140197426No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTCATAGATGGGTCCCAAAGTA1470.11480069973759839No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTGAAGGATAGTTGGGTGC1470.11480069973759839No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG1460.1140197425965263No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC1380.10777208546794953No Hit
CATAGATGAGGGATGTAGGCTGTACACTACGGTTGCAGGATGAATGGGGA1330.10386729976258903No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCACATAGATGCCAAGTAAGTCTA1310.10230538548044482No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)