FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806830

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806830
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences155073
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG93956.058436994189833No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT77705.010543421485365No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT69254.465638763679042No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG61313.9536218426160583No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT42002.7084018494515485No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT40172.5903929117254454No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT33322.148665467231562No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT32332.0848245664944898No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT28281.8236572452973763No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT26881.733377183648991No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG25951.6734054284111355No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT19441.2536031417461453No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG19201.2381265597492794No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG17691.1407530646856643No Hit
CATAGAACTAGTTCCAGCACCACCAGGGCTGCATGGTGACTTTTCTATGT15861.022744126959561No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG15260.984052671967396No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT14290.9215014863967292No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC14150.9124734802318908No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT14030.9047351892334579No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC12690.8183242730842893No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTATAGATGTGGTTGCATGGGGGTC12320.7944645425057876No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACACTGCTCACGATGGTATT12040.7764085301761106No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA11980.7725393846768941No Hit
CATAGAACTGACCATACACTTGCCCTACACTGCTCACGATGGTATTACAT11830.7628665209288529No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG11680.7531936571808115No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT11310.7293339266023099No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA11300.7286890690191071No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT11290.7280442114359044No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG11140.7183713476878631No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTACACTGCTCACGATGGTAT10970.7074087687734164No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA10140.6538855893675882No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCCTCTTCACCTCCCAGATCT9880.6371192922043167No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT9670.6235772829570589No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC9630.6209978526242479No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG9590.6184184222914368No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC9480.6113249888762067No Hit
CATAGACTCAGAACTGGCTCTAATTCCTGTATCCCAGTTAGGCTACTTGG9270.597782979628949No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT9140.5893998310473132No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT9000.5803718248824746No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC8790.566829815635217No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTCTCCCTCTCTCACACATC8670.5590915246367839No Hit
CATAGAACCAACCAATAATAATGTGCTTGTCTGGCACAATGAGGCAATCT8570.5526429488047564No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTTGCAGGATGAATG8220.5300729333926603No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT7320.47203575090441274No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGTCCCCTATTACTGAAAGTTC7280.46945632057160175No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTACGGTAGCAGAGTGGGAGT7000.4514003082419248No Hit
CATAGAACTCTTACCCTTTTGCCAGGACACTTGAAAGCTCCCTGGATCTA6880.44366201724349175No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC6840.44108258691068075No Hit
CATAGACAGGGGCCAGAACTCCTAAGCATTCTTTCTCCAGACCTTCATCT6730.43398915349545053No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT6430.41464342599936804No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGAGTGGGAGTCATTCATGAT6390.41206399566655705No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA6290.40561541983452953No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG6210.40045655916890754No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT6030.38884912267125804No Hit
CATAGAGGGATGGTATCAGAGAAGGCTACGGTTGCAGGATGAATGGGGAC5970.3849799771720416No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC5930.3824005468392305No Hit
CATAGAAGGAGCTGGGAGTTGAGATACACTGCTCACGATGGTATTACATG5890.37982111650641953No Hit
CATAGACAGGGGCCAGAACTCCTAAGTACGGTTGCAGGATGAATGGGGAC5800.3740173982575948No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTCTGCTTTTACAAACTCAAG5780.3727276830911893No Hit
CATAGAAGGGGTGATGCTCTGATGGACACTGCTCACGATGGTATTACATG5690.36692396484236456No Hit
CATAGACACTTGACCATGCCCTTGTTCACACTGCTCACGATGGTATTACA5650.36434453450955356No Hit
CATAGACAATTTCAGTGCGGCCGATGCTGAAGGATAGTTGGGTGCTCTAT5610.36176510417674257No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA5470.35273709801190406No Hit
CATAGAAAAGGGAGGGATTACGGGTGGGTAGAATCTTGAACTCAGGAGTC5420.3495128100958903No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGTGTAAAGCAGCAAACAATTTC5350.3449988070134711No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTACACTGCTCACGATGGTATTACA5340.3443539494302683No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT5100.3288773674334023No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT5060.32629793710059135No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTACGGTTGCAGGATGAATGGGGAC4870.3140456430197391No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC4830.3114662126869281No Hit
CATAGAAAAGGGAGGGATTACGGGTGAGATAATTGCCCTGCTCACGATGG4700.30308306410529234No Hit
CATAGAAAAGGGAGGGATTACGGGTGCATCTATGCAGAGTGGGAGTCATT4510.2908307700244401No Hit
CATAGAACTAGTTCCAGCACCACCAGGAGTTGACAAACGACAGCTTCTAT4380.2824476214428044No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTACGGTTGCAGGATGAATGG3990.2572981756978971No Hit
CATAGAGGGATGGTATCAGAGAAGGCTACACTGAACGAAATTTAGGTGAG3940.25407388778188333No Hit
CATAGAAGAGAACCAAAAATGGACCCACCTAAACTCCTGAGATCCTCTAT3930.2534290301986806No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA3920.25278417261547786No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA3910.2521393150322751No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT3820.2463355967834504No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT3720.2398870209514229No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGCAGTTAGGCTACTTGG3720.2398870209514229No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGGGTAGAATCTTGAACTCAG3670.23666273303540913No Hit
CATAGAAGAGAGCATAATCTATAGAGTTGGAATACGGTAGCAGAGTGGGA3670.23666273303540913No Hit
CATAGAGAAGGAAAACTGGGCTGTGGACACTTGAAAGCTCCCTGGATCTA3650.23537301786900364No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC3590.23150387236978714No Hit
CATAGACGTGTGGTTGGGATGTCAGTGTCCTCTTCACCTCCCAGATCTAT3490.22505529653775963No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTAGCAGACACTTGAAAGC3470.22376558137135413No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG3460.22312072378815137No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGGTAGCAGAGACAGGGGTGTGGT3410.2198964358721376No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG3360.21667214795612388No Hit
CATAGAGGCCCAGGAGAGTTGCTTAATACGGTAGGTGGCTTCTGGTGCAT3280.21151328729050192No Hit
CATAGAAAAGGGAGGGATTACGGGTGTACGGTTGCAGGATGAATGGGGAC3220.2076441417912854No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT3210.20699928420808267No Hit
CATAGACGTGTGGTTGGGATGTCAGCGGAACTTTCCCACCGCCCTTTTCT3190.20570956904167717No Hit
CATAGAACTGTCCCCTACTTTTCACCATGTCGTCAGTCTAGGATGAGATA3180.2050647114584744No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGGTCCCATAGACACTTGAAAG3140.2024852811256634No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC3140.2024852811256634No Hit
CATAGAGGTTGAGGTCTATATTTGAGTGACTTACGGTAGCAGAGTGGGAG3110.20055070837605515No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTTTTATGACAGACCAAGGTCAAGG3070.19797127804324416No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT2950.19023298704481115No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC2920.1882984142952029No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT2720.17540126263114791No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG2640.1702424019655259No Hit
CATAGACTCAGAACTGGCTCTAATTCCTGTACGTCTGAAGAAAGAAAACC2620.1689526867991204No Hit
CATAGAACTAGTTCCAGCACCACCAGATCTATGTGTAGAACCATCTGTCC2620.1689526867991204No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC2510.16185925338389018No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2410.15541067755186266No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT2390.15412096238545717No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTACGGTAGGTGGCTTCTGGTGCA2310.14896210171983518No Hit
CATAGAACCAACCAATAATAATGTGCTTGTATAGATGTGGTTGCATGGGG2250.14509295622061866No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT2240.14444809863741595No Hit
CATAGACACTTGACCATGCCCTTGTTCTTGGTCTCATAGACACTTGAAAG2190.1412238107214022No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGTCCCAAAGTAGGCAATTCTATGT2050.13219580455656368No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC2010.1296163742237527No Hit
CATAGAAAAGTGTATTATGGGCCCAGGTAGGTGGCTTCTGGTGCATCTAT2010.1296163742237527No Hit
CATAGATGAGGGATGTAGGCTGTACACCTCATAGATGTGGTTGCATGGGG1970.12703694389094167No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTACGGTAGGTGGCTTCTGGTGCA1920.12381265597492795No Hit
CATAGACACTTGACCATGCCCTTGTTGACACTTGAAAGCTCCCTGGATCT1870.1205883680589142No Hit
CATAGATCCATGGTGTGCAAGGACAATGGGGAATTCATGTGTGCACAGGA1870.1205883680589142No Hit
CATAGAACTGTCCCCTACTTTTCACCACACTGAACGAAATTTAGGTGAGC1830.11800893772610319No Hit
CATAGAACATCTCCCTGTTCCTCCCAACACTGAACGAAATTTAGGTGAGC1820.11736408014290044No Hit
CATAGAGGGATGGTATCAGAGAAGGCTTGGGTCCCAAAGTAGGCAATTCT1810.11671922255969769No Hit
CATAGAACATCTCCCTGTTCCTCCCATCTTCCTCTCACCTGACAGTAACA1810.11671922255969769No Hit
CATAGAACTGACCATACACTTGCCCTTACGGTAGGTGGCTTCTGGTGCAT1790.11542950739329219No Hit
CATAGACTCAGAACTGGCTCTAATTCCTTAGACTTTCTGAAAATGTTTGC1780.11478464981008944No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA1720.11091550431087294No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGCTCCTCTTCTCTTCCCTC1700.10962578914446744No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG1690.10898093156126469No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA1680.10833607397806194No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGTACCCAGAAGAGAAGTACCAGG1650.10640150122845368No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)