FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806833

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806833
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences215390
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG5708826.50448024513673No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC72153.3497376851293No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC63102.9295696179024096No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA51082.3715121407679094No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT49702.307442313942152No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC45892.1305538790101677No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA42641.9796647940944334No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA38051.7665629787826733No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA37551.7433492734110219No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA37341.733599517154928No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA33331.5474256000742839No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA29051.3487162820929477No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA25931.2038627605738428No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT25151.1676493801940666No Hit
CATAGACAGGGAGGCGTATAAGTGATGTGCTGGCTTGACTTTTCATCTAT24291.1277218069548263No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA20120.9341195041552532No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT18760.8709782255443613No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT17360.8059798505037374No Hit
CATAGATCATGGGACTTCAGCATGGCATCCTTTCCCTCACTCTCTCCATC16960.7874088862064162No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG10730.49816611727563953No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT10360.48098797530061754No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGCCCTTTTTGTGTGCTTCTTTC9540.4429174984911091No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG8730.40531129578903385No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA7970.37002646362412367No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA7880.3658479966572264No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT7650.35516969218626676No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG7040.32684897163285204No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTGTGAGTTGCTGATG7000.3249918752031199No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT6990.32452760109568685No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT6760.3138492966247272No Hit
CATAGATGTCCATCATGTGGAAGCTGGAGACAGCCGCTCACCTCTATGAG6640.3082780073355309No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATCTCTACTAAAAATA6580.3054923626909327No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA6240.28970704303820977No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA5760.2674218858814244No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT5760.2674218858814244No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA5400.25070801801383535No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC5360.24885092158410324No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT5350.24838664747667025No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCATCTCTACTAAAAATA4570.212173267096894No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT4560.21170899298946097No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC4470.20753052602256375No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC4410.20474488137796557No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTAACAAGCAATGGGGAAA4180.1940665769070059No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGGTTTGGACCTGCG4140.1922094804772738No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA4010.1861739170806444No Hit
CATAGATCATGGGACTTCAGCATGGCGGCGTTTGCAGATTTGGACCTGCG3890.1806026277914481No Hit
CATAGATCATGGGACTTCAGCATGGCCTGACGACATGGTTCTACACATAG3830.1778169831468499No Hit
CATAGATCATGGGACTTCAGCATGGCCAACACAGTGAAACCCCATCTCTA3720.17270996796508659No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC3710.17224569385765356No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA3630.16853150099818934No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG3480.1615673893866939No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCTGTCTCTA3480.1615673893866939No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA3430.15924601884952877No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCACAATCCCCAGAAATGTTAGC3340.15506755188263152No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT3270.15181763313060032No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACTGATACAGGAAGGC3130.1453177956265379No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCCGCG3110.14438924741167186No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTCGCAGATTTGGACCTGCG3060.1420678768745067No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC3050.14160360276707368No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG2930.13603231347787734No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGATGAAATCCCGTCTCTA2910.13510376526301127No Hit
CATAGATCATGGGACTTCAGCATGGCTCTACACAAAGTCACGAAAGTGGG2880.1337109429407122No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATTTCTATTAAAAATG2850.1323181206184131No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2830.13138957240354704No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG2760.12813965365151586No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATCTGGACCTGCG2740.1272111054366498No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA2720.12628255722178372No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA2710.12581828311435073No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTGGAGACAGCCGC2680.12442546079205162No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTCTGCAGATTTGGACCTGCG2650.12303263846975254No Hit
CATAGATCATGGGACTTCAGCATGGCCAACAAGGTGAAACCCCATCTCTA2640.1225683643623195No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA2610.12117554204002043No Hit
CATAGACACCATGCCTGGCTAATTTTTGTGTTTTTTAAAGTGGAGACAGC2600.1207112679325874No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCTGTCTCTA2580.11978271971772134No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT2540.11792562328798922No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGATGGTGAAACCCTGTCTCTA2530.11746134918055619No Hit
CATAGATCATGGGACTTCAGCATGGCGTCAGTGTGGAGACAGCCGCTCAC2510.11653280096569013No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCTCATCTCTA2480.11513997864339107No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTGTAATTTTTGTATTTTT2460.11421143042852501No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTTTA2450.11374715632109196No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTCGGACCTGCG2420.1123543339987929No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAGCAGAATTACCTCTGGA2370.11003296346162775No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGGCCTGCG2370.11003296346162775No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCATCTCTACTAAAAGTA2370.11003296346162775No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGAGCTGCCTTCCTAACCATGGGCA2300.10678304470959654No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA2250.1044616741724314No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA2190.10167602952783324No Hit
CATAGATCATGGGACTTCAGCATGGCTAACACGATGAAACCCCGTCTCTA2180.1012117554204002No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTAAAACCCCATCTCTA2170.10074748131296718No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)