FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806835

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806835
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences178006
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACGCGGTATTGTCAGGAGCTAACTGGGATACTGCTCTATGAGACC91795.156567756143051No Hit
CATAGACCTGGTACTTCTCTTCTGGGTCCATTTTTGGTTCTCTTCTATGA80944.547037740300889No Hit
CATAGAACTGAGGCTGGTAGAGGGAGGCGTGGTATGAGGGGAATCTATGA71003.9886295967551657No Hit
CATAGAACTTGTGCTTTTGGTGTCACCCGTAATCCCTCCCTTTTCTATGA67403.7863892228351856No Hit
CATAGATTACTGGGAGACTGGCGCTCACCTCTATGAGACCAAGTCTCTGC61313.444265923620552No Hit
CATAGAGGGAAGAGAAGAGGAGCTGACATCCCAACCACACGTCTATGAGA58803.3032594406930107No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTGGGCCCATAATACACTTTTCTAT49542.783052256665506No Hit
CATAGACAGTCCTGCCGTGTACATGTACAGCCTACATCCCTCATCTATGA45232.540925586777974No Hit
CATAGATGTCCCCATTCATCCTGCAAACAGAATGGGACCCATCTATGAGA35091.9712818669033627No Hit
CATAGAGGATCTCAGGAGTTTAGGTGGGAGGAACAGGGAGATGTTCTATG30161.6943249103962787No Hit
CATAGATTACTGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGCT26251.4746693931665225No Hit
CATAGATGTGTGAGAGAGGGAGAGACAGCCTTCTCTGATACCATCCCTCT24571.380290552003865No Hit
CATAGACGTCTTTTGTGGGTTTTCTTTCTTGAGGTTCTTCAACACAGCTA22921.2875970472905407No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTAC21471.2061391189061041No Hit
CATAGACAGTATGGGGGAAACGGCTCTCTTCCGCCTTTATCCTTCTATGA21311.197150657842994No Hit
CATAGAGCACCCAACTATCCTTCAGCATGAGAAGAATGGCCTCTATGAGA20971.1780501780838848No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGTAAGAGTTCTATGA20841.1707470534701079No Hit
CATAGACGCGGTATTGTCAGGAGCTGACTGGGATACTGCTCTATGAGACC18601.0449085985865645No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCGTGTACAGCCTACATCCCTCAT18391.0331112434412324No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTATAGATTATGCTCTCTTCCGCCT16960.9527768726896846No Hit
CATAGAAAAGTCACCATGCAGCCCTGTGATTGTCCTTGCACACCATGGAT16560.9303057200319091No Hit
CATAGAGGCAAGCTAACTCTGAGATCCATCAGAGCATCACCCCTTCTATG16010.8994078851274676No Hit
CATAGAAAAGTCACCATGCAGCCCTGGGCCCATAATACACTTTTCTATGA14450.8117703897621429No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCTTGTCCTTGCACACCATGGAT13370.7510982775861488No Hit
CATAGAAAAGTCACCATGCAGCCCTGGCAAAAGGGTAAGAGTTCTATGAG13320.7482893835039268No Hit
CATAGAATCCCTGCCCTTGACCTTGGGGGAAGAGAAACAGAATCTATGAG13280.7460422682381493No Hit
CATAGACAGAACACCACACCCCTGTCCTTGTCCTTGCACACCATGGATCT11740.6595283305057132No Hit
CATAGACCATGTAATACCATCGTGAGCAGAATAGGAAAATGTCAGTGGGC11630.653348763524825No Hit
CATAGAATTCCCCAATGTCCTGTGCAAACAGAATGGGACCCATCTATGAG11240.6314393896834939No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCATAGACTGGTGGTGCTGGAACT11080.6224509286203835No Hit
CATAGATCATGAATGACTCCCACTCTGTAGATTATGCTCTCTTCCGCCTT10860.610091794658607No Hit
CATAGAGGTTCTTTGTAGACTTACCTGGCAAAAGGGTAAGAGTTCTATGA10820.6078446793928294No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGCAAACAGAATGGGACCCA10760.604474006494163No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTCCTGGGCCCATAATACACTTTTC10700.6011033335954967No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAAGCCTTCTCTGATAC10310.5791939597541657No Hit
CATAGAATCCCTGCCCTTGACCTTGGTGAAAAGTAGGGGACAGTTCTATG10140.5696437198746109No Hit
CATAGATCATGGGACTTCAGCATGGCAAAAGGGCAAGTGTATGGTCAGTT9870.5544756918306124No Hit
CATAGAATCCCTGCCCTTGTCCTTGCACACCATGGATCTATGAGACCAAG9830.5522285765648348No Hit
CATAGAAGGGCAATTATCTCATCCTAGACGAAGGGCAAGTGTATGGTCAG9330.5241396357426155No Hit
CATAGATTACTGGGAGACAGCCGCTCACCTCTATGAGACCAAGTCTCTGC8760.49211824320528524No Hit
CATAGATTGCCTCATTGTGCCAGACAAGCACATTATTATTGGTTGGTTCT8640.4853768974079525No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCAAGTATATGACACATTACA8590.48256800332573063No Hit
CATAGATGCACCAGAAGCCACCTACCGTACCAAGTATATGACACATTACA8440.47414132107906476No Hit
CATAGACCCCCATGCAACCACATCTATACAATGGGCACACTTAACACCTC8380.4707706481803984No Hit
CATAGAGGTTCTTTGTAGACTTACTTGGCAAAAGGGCAAGTGTATGGTCA8270.4645910811995101No Hit
CATAGATTTGGCACTCACATACACGCCACTGACGACAAGGTTTTCCGGCT8080.45391728368706674No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGGTGAAAAGTAGGGGACAGTT8070.4533555048706223No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAACAAGGGCATGGTCAAGT8020.4505466107884004No Hit
CATAGATCATGAATGACTCCCACTCTGCTACCGTAGGATGACTTATGGAA7550.42414300641551406No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGCACAAGCACATTATTATTGGT7180.4033571902070716No Hit
CATAGAGACCCCCAAGTAGCCTAACTGATCTAGCTTCGGAATGTTTTCAT7060.396615844409739No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGAACAAGGGCATGGTCAAGTG7030.3949305079604058No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTATGAGACCAAGT6940.3898744986124063No Hit
CATAGACGCGGTATTGTCAGGAGCTGACATCCCAACCACACGTCTATGAG6750.3792007010999629No Hit
CATAGACCCCCATGCAACCACATCTACACTGACGACATGGTTCTACACAT6590.3702122400368527No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCAGAACAAGGGCATGGTCAAGTGT6490.3645944518724088No Hit
CATAGAGTCATTCCAAACTGTGCACTTGTCCTTGCACACCATGGATCTAT6210.3488646450119659No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCCCTTCATTTTGCTGGAA5950.33425839578441174No Hit
CATAGATGGCATGTCACTTCCTCAGAGCATCACCCCTTCATTTTGCTGGA5890.3308877228857454No Hit
CATAGAGGCAAGCTAACTCTGAGATCCACAAGCACATTATTATTGGTTGG5830.3275170499870791No Hit
CATAGAATTGCCTACTTTGGGACCCAGCATGAGAAGAATGGCCTCTATGA5770.32414637708841276No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCGAACAAGGGCATGGTCAAGTGTC5610.3151579160253025No Hit
CATAGACAGAACACCACACCCCTGTCCTTGCACACCATGGATCTATGAGA5470.30729301259508107No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCAAA5420.3044841185128591No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTATTTGCCAAGATTGTAGGAG5340.299989887981304No Hit
CATAGAACTTGTGCTTTTGGTGTCACTTACCCTTTTGCCAAGATTGTAGG5320.2988663303484152No Hit
CATAGAATTGCCTACTTTGGGACCCATGCAAACAGAATGGGACCCATCTA5120.2876307540195274No Hit
CATAGAATCCCTGCCCTTGACCTTGCACACCATGGATCTATGAGACCAAG5060.2842600811208611No Hit
CATAGAATTCCCCAATGTCCTTGCACACCATGGATCTATGAGACCAAGTC5030.28257474467152793No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGAACAAGGGCATGGTCAA4960.2786422929564172No Hit
CATAGACAGAACACCACACCCCTGTCCTTAGGAGTTCTGGCCCCTGTCTA4850.2724627259755289No Hit
CATAGAACTTGTGCTTTTGGTGTCACAAGCACATTATTATTGGTTGGTTC4770.26796849544397383No Hit
CATAGACCCACTTACACACACAGGTTTTGGGGGAAGAGAAACAGAATCTA4730.26572138017819624No Hit
CATAGATCATGAATGACTCCCACTCTGGTGGTGCTGGAACTAGTTCTATG4730.26572138017819624No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTGCAAACAGA4700.2640360437288631No Hit
CATAGACCCCCATGCAACCACATCTATGGTGAAAAGTAGGGGACAGTTCT4580.25729469793153037No Hit
CATAGAGGGAAGAGAAGAGGAGCTGCCTGGGCCCATAATACACTTTTCTA4560.25617114029864163No Hit
CATAGAGCAGTGCAGCAGAAGATAGCTCTCTTCCGCCTTTATCCTTCTAT4550.2556093614821972No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCTACCGTAAGGATGACTTATGGA4370.2454973427861982No Hit
CATAGAATCCCTGCCCTTGACCTTGGTCTGTCATAAAACAATGGGCACAC4320.24268844870397624No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGCCAGGGCAAGTGTATGGTCAG4250.23875599698886554No Hit
CATAGATTACTGGGAGACTGGCGCTCTCTTCCGCCTTTATCCTTCTATGA4240.23819421817242115No Hit
CATAGAGCACCCAACTATCCTTCAGCATCACCCCTTCATTTTGCTGGAAC4200.2359471029066436No Hit
CATAGATTGCCTCATTGTGCCAGACACACTGACGACAATGGGCACACTTA4090.22976753592575533No Hit
CATAGATGCACCAGAAGCCACCTACCGTAGCTGAGGTTCTTCAACACAGC4080.2292057571093109No Hit
CATAGAAGGGCAATTATCTCATCCTAGACAGAAGGGCAAGTGTATGGTCA3900.2190937384133119No Hit
CATAGAACCCTGCTTCCTAAATCAACAATGGGCACACTTAACACCTCTAT3850.21628484433108994No Hit
CATAGAATCCCTGCCCTTGACCTTGGGAGGAACAGGGAGATGTTCTATGA3670.20617282563509093No Hit
CATAGAGCAGTGCAGCAGAAGATAGCCTTCTCTGATACCATCCCTCTATG3670.20617282563509093No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATTGGTGAAAAGTAGGGGACAGT3580.20111681628709144No Hit
CATAGATCATGAATGACTCCCACTCTGTTCCCTGGCAAAAGGGTAAGAGT3570.20055503747064707No Hit
CATAGACCATGTAATACCATCGTGAGCAGACAATGGGCACACTTAACACC3550.19943147983775827No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGGAGGAACAGGGAGATGTTCTAT3520.1977461433884251No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTAAGCCTTCTCTGATACCATC3510.1971843645719807No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACTGGTGGTGCTGGAACTAG3460.19437547048975878No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGCTGGTGGTGCTGGAACTAGT3350.18819590350887047No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGAACAAGGGCATGGTCAAG3350.18819590350887047No Hit
CATAGAGACCCCCAAGTAGCCTAACTGCCCCCAAGTATATGACACATTAC3200.17976922126220465No Hit
CATAGATTTGGCACTCACATACACGCCACATAGAATCACTTGATCATCCA3190.17920744244576026No Hit
CATAGATTTGGCACTCACATACACGCTCTCTTCCGCCTTTATCCTTCTAT3170.17808388481287146No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTGCAAACA3150.1769603271799827No Hit
CATAGATGTGTGAGAGAGGGAGAGACATGCCTGGTGAAAAGTAGGGGACA3110.17471321191420514No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCAAACAGAATGGGACCCATCTAT3010.16909542374976125No Hit
CATAGAATTGCCTACTTTGGGACCCATCTGCAAACAGAATGGGACCCATC2860.1606687415030954No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTGAACAAGGGCATGGTCAAGTGT2740.15392739570576272No Hit
CATAGAATTCCCCAATGTCCTGTGCACACCATGGATCTTGTCCTTGCACA2680.1505567228070964No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGACCAAGTCTCTGCTACC2660.1494331651742076No Hit
CATAGAATTGCCTACTTTGGGACCCACTTTGTTCCCTGGCTTCTCTATGA2550.14325359819331934No Hit
CATAGATGAAGGTCTGGAGAAAGAATGCCAGCATGAGAAGAATGGCCTCT2470.1387593676617642No Hit
CATAGAAGCTGTCGTTTGTCAACTCCTACACTGACGACATGGTTCTACAC2460.13819758884531982No Hit
CATAGAAAAGTCACCATGCAGCCCTGATCTAGCTTCGGAATGTTTTCATC2390.1342651371302091No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCCTGGCAAAAGGGTAAGAGTTCTA2340.13145624304798714No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACTGCAAACAGAATGG2240.12583845488354325No Hit
CATAGAGACCCCCAAGTAGCCTAACTGGTGGTGCTGGAACTAGTTCTATG2230.12527667606709886No Hit
CATAGAAAAGTCACCATGCAGCCCTGCCCCTTTACCTACCTTCTCAGCTC2170.12190600316843252No Hit
CATAGAAAAGGGCGGTGGGAAAGTTCTATGAGAGGGCAAGTGTATGGTCA2170.12190600316843252No Hit
CATAGAACTTGTGCTTTTGGTGTCACCACAGCCCAGTTTTCCTTCTCTAT2150.12078244553554375No Hit
CATAGACCATGTAATACCATCGTGAGCAGCACCCCTTCATTTTGCTGGAA2020.11347932092176669No Hit
CATAGAATCCCTGCCCTTGACCTTGGCTACAATCCTGGCAAAAGGGTAAG2020.11347932092176669No Hit
CATAGACAGTCCTGCCGTGTACATGTGTACAGCCTACATCCCTCATCTAT2000.1123557632888779No Hit
CATAGAGCATCCTCGTAATAGCAAACATTTCAGAAAGTCTATGTTAAGCA1970.11067042683954474No Hit
CATAGATGTCCCCATTCATCCTGCAACCGTACCAAGTATATGACACATTA1950.10954686920665595No Hit
CATAGAATTGCCTACTTTGGGACCCATCTATGAGACCAAGTCTCTGCTGC1940.10898509039021158No Hit
CATAGATCATGAATGACTCCCACTCTGGGCCCATAATACACTTTTCTATG1890.10617619630798962No Hit
CATAGACAGAACACCACACCCCTGTCGAACACCACAGCCCAGTTTTCCTT1840.10336730222576768No Hit
CATAGATCCAGGGAGCTTTCAAGTGTCTATGAGGAACAAGGGCATGGTCA1840.10336730222576768No Hit
CATAGACAGTCCTGCCGTGTACATGTACCCAAGTATATGACACATTACAC1810.10168196577643449No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)