FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806837

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806837
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116556
Sequences flagged as poor quality0
Sequence length150
%GC39

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG1838215.77095988194516No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA50704.349840420055596No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA32512.789217200315728No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT27792.384261642472288No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG27092.324204674148049No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC27092.324204674148049No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT24622.11228937163252No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA18921.6232540581351453No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT16641.4276399327361955No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG16131.3838841415285357No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG15861.3607193108891862No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG15391.3203953464429117No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA13091.123065307663269No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA12951.1110539139984215No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA11861.0175366347506778No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT11580.9935138474209823No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGAGGCAGAGGACAGGTATC10440.8957067847215073No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA10390.8914170012697759No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT9090.7798826315247607No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA8890.7627234977178352No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA7540.6468993445210885No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7430.6374618209272795No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC7310.6271663406431243No Hit
CATAGATCACTTGACTACAGAAAAAGGTCTGCTGAGATTGGCCTGTGTCT6680.5731150691513093No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGGTGGGGAAAGAGAGCACT6200.5319331480146883No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTATCCTAAGCAAA6180.5302172346339956No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA5990.5139160575174165No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG5700.48903531349737467No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA5450.46758639623871784No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACACTGACGACATGCCTCT5350.45900682933525516No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA5230.4487113490510999No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG4910.4212567349600192No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA4840.41525103812759534No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGCAAACTAACACAGAAACA4760.40838738460482515No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4690.4023816877724013No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT4570.392086207488246No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCCTGTTCACTCTGATGGTA4550.3903702941075535No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTCTTGTAGAAGGGATGGTCT4450.38179072720409074No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCACACTGACGACATGTGTGA4410.37835890044270565No Hit
CATAGATGCTTCTGATATGTTGCCGTACACTGACGACATGGTTCTACACA4280.36720546346820415No Hit
CATAGAAGGAGCTGGACTGGATGGACCTAGAGGCTATTACACTTAGCAAA4270.3663475067778579No Hit
CATAGAATACAACACACTCTCTGCCCTGACACGGACTACAAGTACCCACC4160.3569099831840489No Hit
CATAGATGCTTCTGATATGTTGCCGTATCTGCTGAGATTGGCCTGTGTCT4130.35433611311301005No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG4080.3500463296612787No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG3910.3354610659253921No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT3910.3354610659253921No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG3820.32773945571227564No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACTACAAGTACCCACCAC3750.3217337588798518No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA3740.32087580218950545No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTAGGGTGGGGAAAGAGAG3720.31915988880881296No Hit
CATAGAATACAACACACTCTCTGCCCTGGAGGAGTGAGTAGGTTGCAAAA3690.31658601873777414No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTCTTGTAGAAGGGATGGTCTA3670.31487010535708154No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG3520.3020007550018875No Hit
CATAGAAGGAGCTGGACTGGATGGACCTGGAAGCCATTAACCTCAGCAAA3330.2856995778853083No Hit
CATAGATGTGCCACATACCTTTCCCACACTGACGACATGGTTCTACACAT3320.2848416211949621No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCCTGTTCACTCTGATGGTACTT3310.2839836645046158No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCATAGAACAGCTAAAAATC3300.28312570781426954No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCAGGGCTAGACCAAAGCTAG3260.27969388105288445No Hit
CATAGATGCTTCTGATATGTTGCCGTATCCAGATCCTTGTCAACTCTTGG3150.27025635745907545No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTCTAACTTCATAGCACATCATG3100.26596657400734414No Hit
CATAGATTTGTGTGAGAAGGAGCAAGACCAAAGCTAGAAACTCCCATCTA3040.2608188338652665No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG3020.25910292048457395No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCACAACTGGCATCTGGTGATCT3000.2573870071038814No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGATGGCTGAGAAAGGAGGATCACTC2930.2513813102714575No Hit
CATAGATGTGCCACATACCTTTCCCATCATCTTCCACTTGCCTACAGGTG2820.24194378667764851No Hit
CATAGATGCTTCTGATATGTTGCCGTAGTTGCCTTTCCTCAGTTCTTTTT2700.23164830639349326No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA2650.2273585229417619No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGCTCTATGAGACCA2640.22650056625141565No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2620.22478465287072308No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGAGAGGAGGGGGCAGAATATCT2590.22221078279968426No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGTTGCCTTTCCTCAGTTCTTTT2540.21792099934795292No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGAGAGGAGGGGGCAGAATATCT2460.21105734582518274No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTGCCTGTTCACTCTGATGGT2420.20762551906379767No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT2420.20762551906379767No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT2400.2059096056831051No Hit
CATAGACCCTCCTATCCCTTTTCCCCACACGGACTACAAGTACCCACCAC2350.20161982223137376No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGCTGAGAAAGGAGGATCACTCT2330.19990390885068124No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT2320.19904595216033494No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT2300.19733003877964242No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAATTTGCAAATACAGAATCAGTG2250.19304025532791105No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGCACAACTGGCATCTGGTGA2230.1913243419472185No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAGGGTGGGGAAAGAGAGCA2230.1913243419472185No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCAGATCCTTGTCAACTCTT2170.1861766018051409No Hit
CATAGATCATGGGACTTCAGCATGGCTGAGAAAGGAGGATCACTCTATGA2160.1853186451147946No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTAGACATGTGTGAGAGGGAAGG2010.17244929475960052No Hit
CATAGAATACAACACACTCTCTGCCCTGTACGGAGATAGAGAGGTTGGTT1990.17073338137890798No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCCATAGAACAGCTAAAA1980.16987542468856173No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1920.1647276845464841No Hit
CATAGAGAACAGCCCTGAGAGAATGCATAGAGAACAGCTAAAAATCTTGG1900.16301177116579155No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG1860.15957994440440648No Hit
CATAGATGCCTCAAAGAGCTGAAGACATGTGTGAGAGGGAAGGACTCTAT1840.15786403102371394No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATGTGCAGCAACAAAAGTCACTCC1830.15700607433336766No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTCTAACTTCATAGCACATCATG1800.15443220426232884No Hit
CATAGAATACAACACACTCTCTGCCCTGGTGGAGGGCTTTGCTGTTTCTA1790.15357424757198257No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGAGAGGAGGGGGCAGAATA1730.14842650742990493No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAGTCTAGGAGAGGAGGGGGC1710.14671059404921238No Hit
CATAGACCCCATGTGCAGTGTAAGCTACACTGGAGACAGCCGCTCACCTC1700.1458526373588661No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTGGGGGGAGAGGAGGGGGC1670.14327876728782732No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGGGTCTCGAGGCAGAGGACAGGTAT1670.14327876728782732No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTATGGTGGAGGGCTTTGCTGTT1660.14242081059748105No Hit
CATAGATGCTTCTGATATGTTGCCGTAGGGTGGGGAAAGAGAGCACTCTA1660.14242081059748105No Hit
CATAGATGCTTCTGATATGTTGCCGTAGCAAACTAACACAGAAACAGAAA1660.14242081059748105No Hit
CATAGAGAACAGCCCTGAGAGAATGCACATCTACAAGGACACTCATCTAT1640.1407048972167885No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTATGTGCCTCTTGTAGAAG1620.13898898383609595No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCCTCAGCACAGTGAAACAAGATC1610.13813102714574968No Hit
CATAGACGGGCCAGAGAATAGTGCTAGAAACTCCCATCTATGAGACCAAA1600.13727307045540343No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA1580.13555715707471086No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGTAGAATTTGCAAATACAGAA1570.1346992003843646No Hit
CATAGAAGGAGCTGGACTGGATGGACCTCCAAGAACATTAGCTTAGTTAA1560.1338412436940183No Hit
CATAGAATACAACACACTCTCTGCCCTGACACTGACGACACGGACTACAA1520.13040941693263325No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT1510.12955146024228698No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1510.12955146024228698No Hit
CATAGAGGATCCCCTGACATTTTGGTTGAATATTGGGGATGGCTGGTTGA1510.12955146024228698No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCATAGAACAGCTAAAAATCT1510.12955146024228698No Hit
CATAGATGTGCCACATACCTTTCCCAGTGTAGGGTGGGGAAAGAGAGCAC1500.1286935035519407No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGGGTGGGGAAAGAGAGCACTCT1500.1286935035519407No Hit
CATAGATGTGCCACATACCTTTCCCAGGTGCAAATTGTCAGTGTGTCTAT1490.12783554686159443No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTATGTACAGGTGCAAATTGTCA1460.1252616767905556No Hit
CATAGACTCTGTTTTGCTACCTGGGGAGAGGAGGGGGCAGAATATCTATG1450.12440372010020934No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGCTGAGATTGGCCTGTG1450.12440372010020934No Hit
CATAGAGAACAGCCCTGAGAGAATGCTGCAGGGTAATGGAGGAGTATGGG1450.12440372010020934No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCGGTCATTCTTCTCTGGGGG1440.12354576340986308No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGCTGAGAAAGGAGGATCACTCT1410.12097189333882426No Hit
CATAGAACAGTAAGTCAGCTCCTCCTACACTGACGACATGGTTCTACACA1390.11925597995813171No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAACCTCTATGAGACCAAA1390.11925597995813171No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTGGGGAAAGAGAGCACTCTAT1370.11754006657743916No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGATGGACTGGATGGACTGGATG1370.11754006657743916No Hit
CATAGATGTGCCACATACCTTTCCCACACGGACTACAAGTACCCACCACC1350.11582415319674663No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGGTGGAGGGCTTTGCTGTTTC1320.11325028312570783No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGACACTTTGGACTCTGCCT1300.11153436974501527No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGAGAGGAGGGGGCAGAATATCTATG1290.110676413054669No Hit
CATAGAATACAACACACTCTCTGCCCTGCCTCTTGTAGAAGGGATGGTCT1280.10981845636432272No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGTGAAACAAGATCGTGCCTCT1240.10638662960293765No Hit
CATAGAATACAACACACTCTCTGCCCTGTACGGTAGCAAACTAACACAGA1230.10552867291259137No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTGTCTCATAGATCCCATACTCC1220.1046707162222451No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTACAAGGACACTTTGGAC1190.10209684615120629No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGTTGCCTTTCCTCAGTTCTT1190.10209684615120629No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)