FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806843

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806843
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3255
Sequences flagged as poor quality0
Sequence length150
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGATGTTTGATAAGCAGGGTGAACACTGACGACATGGTTCTACAC2537.772657450076805No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT2497.649769585253456No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT2156.605222734254992No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA2086.390168970814132No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG2066.328725038402458No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA1775.43778801843318No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT1554.761904761904762No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA983.010752688172043No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG762.334869431643625No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC531.6282642089093702No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG471.4439324116743473No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATCCCCA441.3517665130568357No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC351.0752688172043012No Hit
CATAGATGCCCTTTTTGTGTACTTCCAGATGCCCTTTTTGTGTGCTTCTT341.044546850998464No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCACACTGACTGATACAGGAAGG310.9523809523809524No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTGGAG310.9523809523809524No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT290.8909370199692781No Hit
CATAGATTGGAACTTTGCCAGCCTTACCTGATTGGCCATTTGAACTCTAT270.8294930875576038No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG260.7987711213517665No Hit
CATAGATGCCCTTTTTGTGTACTTCCAATGCCCTTTTTGTGTGCTTCTTT240.7373271889400922No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT240.7373271889400922No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT240.7373271889400922No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC230.706605222734255No Hit
CATAGAAACCCCAAAGGCTATGTTCAGTGTATACGTGAATGTGGATCAGA220.6758832565284179No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGATGCCCTTTTTGTGTGCTTC170.522273425499232No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTATGACTGATACAGGAAG170.522273425499232No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA150.4608294930875576No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCTATGTGTTCAAAATGGTC150.4608294930875576No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA150.4608294930875576No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGCCCTTTTTGTGTGCTTCTTTC140.43010752688172044No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT140.43010752688172044No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT140.43010752688172044No Hit
CATAGAACCTCTTTTGGGGCAAAGTTACAAGCAATGGGGAAAGGATTCTA140.43010752688172044No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA130.39938556067588327No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA130.39938556067588327No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTCTGTTATTCAAAGGTTTTCT110.3379416282642089No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGATCCTTTCCCTCACTCTCTC100.30721966205837176No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATCTATGTGTACAAGCAATGG100.30721966205837176No Hit
CATAGATGCCCTTTTTGTGTACTTCCACCCTTTTTGTGTGCTTCTTTCAA100.30721966205837176No Hit
CATAGATTGGAACTTTGCCAGCCTTCCTAACCATGGGCATATCTATGAGA90.2764976958525346No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC90.2764976958525346No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCCAATGGGCA90.2764976958525346No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATCCCCAGAAATGTTAGCATGT90.2764976958525346No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTATCCCCAGAAATGTTAG80.2457757296466974No Hit
CATAGAACTTCACAAGGGCTTTAGAGGCTACACATGGCTATGCAATCTAT80.2457757296466974No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA80.2457757296466974No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT80.2457757296466974No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA70.21505376344086022No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTGCTA70.21505376344086022No Hit
CATAGAAAACAGAGTCACAGTCCCCAGAAATGTTAGCATGTCTATGAGAC70.21505376344086022No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA70.21505376344086022No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT70.21505376344086022No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGAGTCACAATCCCCAGAAATGT60.18433179723502305No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACTGATACAGGAAGGC60.18433179723502305No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG60.18433179723502305No Hit
CATAGAGCTGTTTGATAAGCAGGGTGAACACTGACGACATGGTTCTACAC60.18433179723502305No Hit
CATAGAGAGATTTTGGGCTGAGACGAAGTCTCTGCTTCCTTCTGCTGGCT60.18433179723502305No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGCAATGGGCAAG60.18433179723502305No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTACCTGATTGGCCAT60.18433179723502305No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG60.18433179723502305No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTTATCCCCAGAAATGTT50.15360983102918588No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCTTGTGCTGGCTTGACTTTT50.15360983102918588No Hit
CATAGATGTCAAGAGTCTAATTCCTACTCAGGAGGCTGAGGCAGTCTATG50.15360983102918588No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGTCTGTTATTCAAAGG50.15360983102918588No Hit
CATAGAGAGATTTTGGGCTGAGACGAAGTCTCTGCTACCGTACCTGATTG50.15360983102918588No Hit
CATAGAGAGATTTTGGGCTGAGACGACACTGACGACATGGTTCTACACAT50.15360983102918588No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA50.15360983102918588No Hit
CATAGAAAACAGAGTCACAGTCCCCAGATCCCCAGAAATGTTAGCATGTC50.15360983102918588No Hit
CATAGATCCCATCCAATAATAATGCACAAGCAATGGGGAAAGGATTCTAT50.15360983102918588No Hit
CATAGAGATGTTTGATAAGCAGGGTGTTGATTGTGTTATTGGTAAGGGTC50.15360983102918588No Hit
CATAGACCTGGGCTTAGGGGCTATGCATGGCTATGCAATCTATGAGACCA50.15360983102918588No Hit
CATAGAGCAACAGGGACTCTCATTCAATAACAATGGGCAAGCAATGACAG50.15360983102918588No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA50.15360983102918588No Hit
TAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTATGA50.15360983102918588No Hit
CATAGATCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTATG50.15360983102918588No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATGGTTTACCATTTTCCCCCAA50.15360983102918588No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC40.1228878648233487No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA40.1228878648233487No Hit
CATAGACCTGGGCTTAGGGGCTACCCATGGCTATGCAATCTATGAGACCA40.1228878648233487No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCTTCTGCTGGCTATTCTATG40.1228878648233487No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG40.1228878648233487No Hit
CATAGAAAACAGAGTCACAGTCCCCAGAAATGTTAGCATGTCTATCCCCA40.1228878648233487No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)