FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806846

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806846
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences193596
Sequences flagged as poor quality0
Sequence length150
%GC38

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA3271216.897043327341475No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAATTCTCTATGTGT145197.499638422281452No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACATCTATGTGTAG112575.81468625384822No Hit
CATAGAACCAACCCTGATTCTGCTGCTCACTCTTTGGGTTCTATGTGTAG70743.654001115725532No Hit
CATAGAACAATCAGGCACCCACCATGCTGAAGTCCCATGATCTATGTGTA60743.1374615177999545No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGTGTGGCCAACAGGAAGGTCTA60283.113700696295378No Hit
CATAGATGTTGTTGTTCTGTTGCCCAATATGAACAGAAAGAAGCTCTATG53712.7743341804582737No Hit
CATAGATGAAAGAGCATTGGTTGTAACACCGAAAAACACCCTCTATGTGT51742.6725758796669354No Hit
CATAGATGTTGTTGTTCTGTTCCCCAATATGAACAGAAAGAAGCTCTATG49832.57391681646315No Hit
CATAGATGAAAGAGCATTGGTTGTGACACCGAAAAACACCCTCTATGTGT39722.0516952829603916No Hit
CATAGATCTCAAACAGCCTCTCCCAGGAAAGTTGGAACCTATCAGTGTCT36531.8869191512221328No Hit
CATAGATCTCAAACAGCCTCTCCCAGGGTAATTCTGGCCTTGTTCTATGT34971.806338973945743No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAATTCTCTATGTG32071.6565424905473254No Hit
CATAGATAGCAGCAATCTCAGGCCTGGGAGACCCCATATCTACCAAAGAT26141.3502345089774583No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGGAAAGTTGGAACCTATC25041.2934151532056448No Hit
CATAGAGCCATCATCATTTCTCACCCAGGGTAATTCTGGCCTTGTTCTAT24061.2427942726089383No Hit
CATAGAGCCATCATCATTTCTCACCCAGGAAAGTTGGAACCTATCAGTGT22591.1668629517138784No Hit
CATAGATCCCTGGCAAGAATTCCTCTTCTTCCTCCTCCTGTCTATGTGTA21581.1146924523233952No Hit
CATAGATCTCAAACAGCCTCTCCCAGAAGCTTTGAGATTTGTGTCTGTTC15410.7959875204033141No Hit
CATAGATGTTGTTGTTCTGTTGCCCACTCTTTGGGTTCTATGTGTAGAAC14130.7298704518688403No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCCGATGCTTATTACATTGTTCTA13490.6968119176016033No Hit
CATAGAGATCTTCTCGGCTTAGCGGCCATTGTCGCCTTCTCTTCTCTATG12900.6663360813239944No Hit
CATAGAGCCATCATCATTTCTCACCCAGAAGCTTTGAGATTTGTGTCTGT12410.641025641025641No Hit
CATAGATGCCAAGAAGAGAAAAGCAGCCATTGTCGCCTTCTCTTCTCTAT11870.6131325027376598No Hit
CATAGATGTTGTTGTTCTGCTGCTCACTCTTTGGGTTCTATGTGTAGAAC11670.6028017107791483No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACATTTATCGGGAGCCACAGA11620.6002190127895204No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTATGCAGTCTGTGAGCTGTC11380.5878220624393066No Hit
CATAGACAAGCCTGCCAAGACCTCTCCTCTTCTTCCTCCTCCTGTCTATG11300.5836897456559019No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTATGTGTAGAACCATG11130.5749085724911671No Hit
CATAGATCCAGCTTCATCCATGTCCCGTGGTGTGCAAAATTCTCTTGACA11120.5743920328932416No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCAGGGTAATTCTGGCCTT9770.5046591871732887No Hit
CATAGAAAGGGACAAGGGCTCACTCTGCTGCTCACTCTTTGGGTTCTATG9560.4938118556168516No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGGGTAATTCTGGCCTTGTTCTAT8360.4318271038657824No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAGTGTACATTTATCGGGAG8060.416330915928015No Hit
CATAGATAGCAGCAATCTCAGGCCTCTACACTGAAACATTTTCTGGTCAG7480.3863716192483316No Hit
CATAGATCCCTGGCAAGAATTCCTCATGGTGGGAGTATACTGATAGCTCT7440.38430546085662926No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACCAAAAGCACAAG6560.33884997623917845No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACAACACCAAAAGCACAAGGG6550.3383334366412529No Hit
CATAGATAGCAGCAATCTCAGGCCTCAGGTAAACAAACTTCTGGCCCTCT6400.3305853426723693No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTGGCCACCAAAAGCACAAGGGAG6330.3269695654868902No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGTATGCAGTCTGT6230.32180416950763446No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTAGGTAAACAAACTT6210.3207710903117833No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCGTGCTCTTGGC6150.3176718527242298No Hit
CATAGACGGGAAGAGTAAGACCACCCACACTGAAACATTTTCTGGTCAGC6030.3114733775491229No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCACATTTATCGGGAGCCA5950.3073410607657183No Hit
CATAGATGTTGTTGTTCTGTTGCCCAGGAAAGTTGGAACCTATCAGTGTC5860.30269220438438815No Hit
CATAGAGGAAAGAACAACTGCGGACGTAGAGGCAAGGGTACTATTTTGAT5810.3001095063947602No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTCCCATGATCTATGTGTAGA5200.26860059092130006No Hit
CATAGAAAGGGACAAGGGCGCACTCTAGCCTGGGAGACATCTATGTGTAG5180.2675675117254489No Hit
CATAGATCAAGGTGTGAGCATGGTCCCGTGGTGTGCAAAATTCTCTTGAC4950.2556871009731606No Hit
CATAGATCTCAAACAGCCTCTCCCAGAGGTTTCCTGGGCATCAAGTCTAT4940.255170561375235No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAGAGACCAAGGAGGTTTCCTG4850.2505217049939048No Hit
CATAGACTCACTCTGTCACCCAAGCTGGAGTGCAGTGGCATGACCTTAGC4840.2500051653959793No Hit
CATAGATAGCAGCAATCTCAGGCCTCTAGTAACAGGAAAGTTGGAACCTA4810.2484555466022025No Hit
CATAGAGGTGTTTCTTATAGTCAACTGAAGTTGGTCTCATAGAGAAGCTT4580.23657513584991424No Hit
CATAGACTCACTCTGTCACCCAAGCTGGGTGTTTTTCGGTGCCATACCAA4400.22727742308725385No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAGGTAAACAAACTTCTGGC4320.22314510630384926No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTCTATGTGAGGTTTCCTGGGCAT4260.22004586871629578No Hit
CATAGAGGGCTATCCTTGCTCAGATCAGTGTACTATGGCTTAATGTTTCT3980.20558275997437964No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGAAAGTTGGAACCTATCAGTGTCTA3820.1973181264075704No Hit
CATAGAGTTCTCACTCTCCGCTAATTCTTACGGTAGCAGAGGCAAGGGTA3640.18802041364491No Hit
CATAGAACTGAAACTAGGAAACATGTCTGAAACATTTTCTGGTCAGCTGT3410.17614000289262174No Hit
CATAGATAGCAGCAATCTCAGGCCTCCTCTTCTTCCTCCTCCTGTCTATG3370.17407384450091942No Hit
CATAGAAAGGGACAAGGGCTCACTCTCTGCTGCTCACTCTTTGGGTTCTA3350.1730407653050683No Hit
CATAGATGTTGTTGTTCTGTTGCCCATGTCGTCAGTGTAGAAGCTTTGAG3110.16064381495485444No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTAACCTGTGTATATTCTCCT3030.15651149817144983No Hit
CATAGAACAATCAGGCACCCACCATGTCGTACATTTATCGGGAGCCACAG3000.15496187937767308No Hit
CATAGAGAAGCTTTGAGATTTGTGTCTGTTCTATGTGTAGAACCATGTCG2950.1523791813880452No Hit
CATAGAAAGGGACAAGGGCTCACTCTTTGGGTTCTGCTGCTCACTCTTTG2880.14876340420256617No Hit
CATAGATCCAGCTTCATCCATGTCCCTACGGAGGCTGAAACTCTAAGGGT2800.14463108741916156No Hit
CATAGAGCTAGATCTAATTCTGTATGAGCACTCTAGCCTGGGAGACATCT2720.14049877063575694No Hit
CATAGAGAAACTTTTAATAATGAAATACTGGGGGAGACCCCATATCTACC2670.13791607264612907No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACGTGGTGTTTGGG2590.13378375586272445No Hit
CATAGAACAATCAGGCACCCACCATGGTCGTCAGTGTAGGTAAACAAACT2550.13171759747102213No Hit
CATAGAAAGGGACAAGGGCTCACTCTAGCCTGGGAGACCCCATATCTACC2540.13120105787309655No Hit
CATAGAACAATCAGGCACCCACCATGTCAGGTAAACAAACTTCTGGCCCT2430.12551912229591522No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTAGTATGCAGTCTGTGAGCTGTC2410.12448604310006406No Hit
CATAGATCCCTGGCAAGAATTCCCCAATATGAACAGAAAGAAGCTCTATG2390.1234529639042129No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCGTCATGTAGAGGCAAGGGT2330.12035372631665944No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTGTGCCATACCAAGA2330.12035372631665944No Hit
CATAGATCCCTGGCAAGAATTCCTCAATATGAACAGAAAGAAGCTCTATG2320.11983718671873386No Hit
CATAGAACAATCAGGCACCCACCATGTCGTCAGTGTACTATGGCTTAATG2170.11208909274985021No Hit
CATAGATCAAGGTGTGAGCATGGTCCTCTTCTTCCTCCTCCTGTCTATGT2100.10847331556437118No Hit
CATAGATCCAGCTTCATCCATGTCCCAGTGTGAGGTTTCCTGGGCATCAA2070.10692369677059443No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGAAACATTTTCTGGTCAGCTGT2060.10640715717266885No Hit
CATAGATCCAGCTTCATCCATGTCCCTCCTCTTCTTCCTCCTCCTGTCTA2030.10485753837889211No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTACTATGGCTTAATG2010.10382445918304098No Hit
CATAGATGGTAAGATGACATAGTGAAGAGTCAGTGTACCAAAAGCACAAG1990.10279137998718982No Hit
CATAGATCCAGCTTCATCCATGTCCCTGCTAGGTAAACAAACTTCTGGCC1980.10227484038926424No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)