FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806850

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806850
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130763
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA108358.28598303801534No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA59014.512744430764054No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT52894.044722130878001No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG51023.9017153170239287No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT50773.8825967590220474No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA31352.3974671734359108No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT26011.9890947745157268No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA25201.9271506465896315No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGAATGATATTGTTGCAGATTTC22261.7023164044875079No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG20831.592958252716747No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG18891.4445982426221484No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA18451.4109495805388375No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA17961.3734772068551502No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT17231.3176510174896567No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT14481.107346879468963No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG13681.0461674938629428No Hit
CATAGACCATCCCTTCTACAAGAGGCAACAATGCCTCACACACAGGTCTA11760.8993369684084948No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA11360.8687472756054847No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA10310.7884493319975834No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT9380.7173282962305851No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA9360.7157988115904346No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT9090.6951507689484028No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT9040.6913270573480266No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA8990.6875033457476503No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG8910.6813854071870483No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT8860.6775616955866721No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT8800.6729732416662206No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA8440.6454425181435116No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT8230.6293829294219313No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT8140.6225002485412541No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG7650.5850278748575667No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAGCACTATTCTCTGGCCCGTCTAT7460.570497770776137No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT7330.5605561206151587No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTCACTGAGCTGAGGGTC7210.5513792127742557No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC7010.5360843663727507No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT6910.5284369431719982No Hit
CATAGAGTGATCCTCCTTTCTCAGCCATGCTGAAGTCCCATGATCTATGT6830.5223190046113961No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTGTTTACTCGGAGATTTGACTG6610.5054946735697406No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTACGGCAACATATCAGAAGCAT6420.4909645694883109No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCTAGCCAAATTCCTTACCGATCTA6200.47414023844665537No Hit
CATAGATCCCATACTCCTCCATTACCCTCTAGCCAAATTCCTTACCGATC6160.4710812691663544No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGGGAAAGGTATGTG6110.4672575575659781No Hit
CATAGATACCTGTCCTCTGCCTCGAGTACGATAGCGAGAAGAGTGGAGGC6060.4634338459656019No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA5850.4473742572440216No Hit
CATAGAGGAGTGACTTTTGTTGCTGCAACAATGCCTCACACACAGGTCTA5580.42672621460198984No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATTCTCTCAGGGCTGTTCTCTATG5550.42443198764176415No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTTACGGAAGACACAGCACACTC5320.40684291428003333No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGATAGCGAGAAGAGTGGAGGC5130.39231281019860353No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGCCCCAGGTAGCAAAACAG5110.390783325558453No Hit
CATAGAGTCCTTCCCTCTCACACATGTTACGATAGCGAGAAGAGTGGAGG5060.3869596139580768No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC5050.3861948716380016No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC4880.3731942521967223No Hit
CATAGATCACCAGATGCCAGTTGTGCATTCTCTCAGGGCTGTTCTCTATG4810.3678410559561956No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCACTGAGCTGAGGGTCACTTCT4810.3678410559561956No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGTGCATTCTCTCAGGGCT4800.3670763136361203No Hit
CATAGAGGCACAGGGATAATGAGGGAGTGTCATAGGGCACTGAGACCACA4720.3609583750755183No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT4720.3609583750755183No Hit
CATAGACACAGGCCAATCTCAGCAGAAGTGTATTAATTATCTATGGCTGC4660.3563699211550668No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGAAGACACAGCACACTCTTC4540.34719301331416375No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGTCACTGACAGGTCTTAAAGC4390.33572187851303503No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCGTAGGAATCTTTGGGAGGCTA4280.3273097129922073No Hit
CATAGATCACCAGATGCCAGTTGTGCTAAGGAATCTTTGGGAGGCTATTA4230.32348600139183104No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGGCAACATATCAGAAGCATCT4080.31201486659070227No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGGCAACATATCAGAAGCAT4070.31125012427062704No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA4050.30972063963047647No Hit
CATAGAAACAGCAAAGCCCTCCACCATACGGCAACATATCAGAAGCATCT4010.3066616703501755No Hit
CATAGATCACCAGATGCCAGTTGTGCGTGTGAGGAATCTTTGGGAGGCTA3930.3005437317895735No Hit
CATAGAGGCACGATCTTGTTTCACTGTCACTGAGCTGAGGGTCACTTCTA3800.29060208162859524No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT3730.2852488853880685No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTGCATTCTCTCAGGG3720.28448414306799324No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCCCCAGGTAGCAAAACAGAGTCT3620.27683671986724073No Hit
CATAGAAACAGCAAAGCCCTCCACCAGCGGTAGCAGGAATCTTTGGGAGG3610.2760719775471655No Hit
CATAGACCCCCTTGAGTTCACTGGACACACTGAAGCAGAGGTAGATGGAT3360.2569534195452842No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGAGACCTTTTTCTGT3280.25083548098468217No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC3220.2462470270642307No Hit
CATAGAGCCCCCAGAGAAGAATGACCAGCCCCCAGGTAGCAAAACAGAGT3160.2416585731437792No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG3060.2340111499430267No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA3060.2340111499430267No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC3050.23324640762295143No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGGCAACATATCAGAAGCATCTA3020.2309521806627257No Hit
CATAGATACCTGTCCTCTGCCTCGAGGACACGGAAGACACAGCACACTCT2980.2278932113824247No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTACACTGAGAAGTGTATTA2960.22636372674227417No Hit
CATAGACCATCCCTTCTACAAGAGGCATGTCAGGAGGAGCTGACTTACTG2950.22559898442219894No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC2830.21642207658129592No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACTGGGAAAGGTATGTGGCACATC2790.21336310730099492No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGGTAGCAGGAAACATTGGA2770.21183362266084443No Hit
CATAGATATTCTGCCCCCTCCTCTCCTACGGCAACATATCAGAAGCATCT2700.20648042642031766No Hit
CATAGAGGAGTGACTTTTGTTGCTGCATAGAGGAGAATGATATTGTTGCA2640.20189197249986618No Hit
CATAGAGGCACGATCTTGTTTCACTGTTCATAGGGCACTGAGACCACATC2510.19195032233888792No Hit
CATAGAAGTACCATCAGAGTGAACAGGCTACGATAGCGAGAAGAGTGGAG2480.18965609537866215No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTTACGATAGCGAGAAGAGTGGAG2450.1873618684184364No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCAGGGCAGAGAGTGTGTTG2440.18659712609836115No Hit
CATAGATCACCAGATGCCAGTTGTGCCATGCTGAAGTCCCATGATCTATG2370.1812439298578344No Hit
CATAGAGTGCTCTCTTTCCCCACCCTGTTTTCTGTTTACTCGGAGATTTG2360.18047918753775916No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTATGTGCATAGGGCACTGAGAC2350.1797144452176839No Hit
CATAGACCACACACACAACTGAGAGTCACTGAGCTGAGGGTCACTTCTAT2330.1781849605775334No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACGATAGCGAGAAGAGTGGAGGCT2200.16824331041655516No Hit
CATAGAACCAACCTCTCTATCTCCGTCAGTGTACGGCAACATATCAGAAG2200.16824331041655516No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT2180.16671382577640462No Hit
CATAGATACCTGTCCTCTGCCTCGAGGCTGTCTTCAGCTCTTTGAGGCAT2140.16365485649610365No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGCAACATATCAGAA2090.15983114489572736No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGACCTTTTTCTGTAGTCA2050.1567721756154264No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTAGACCTTTTTCTGTAGTCA2030.15524269097527588No Hit
CATAGAGTCCTTCCCTCTCACACATGTACACTGTCTTCAGCTCTTTGAGG2010.1537132063351254No Hit
CATAGACCAAGAGTTGACAAGGATCTGGAGGAGAATGATATTGTTGCAGA2000.1529484640150501No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAAACATTGGAAAGATGGGGA1980.15141897937489962No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGTAAGCTTACACTG1960.14988949473474913No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTGTCCATCCAGTCCAGCTCCTTC1910.14606578313437285No Hit
CATAGACACACTGACAATTTGCACCTGCCTAGCCCCAGGTAGCAAAACAG1910.14606578313437285No Hit
CATAGACCATCCCTTCTACAAGAGGCATTCTCTCAGGGCTGTTCTCTATG1880.14377155617414714No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTGCATTCTCTCAGGGCTGTT1870.14300681385407188No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTAGAGAAGTGTATTAATTATCT1860.14224207153399662No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTGAAGCAGAGGTAGATGGATCATC1820.1391831022536956No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGGGTAGAGAGTTCT1770.13535939065331937No Hit
CATAGATATTCTGCCCCCTCCTCTCCTGTGTCTTCAGCTCTTTGAGGCAT1750.13382990601316888No Hit
CATAGACCATCCCTTCTACAAGAGGCAGGTGGGTAGAGAGTTCTGTAGAT1750.13382990601316888No Hit
CATAGAGGCACGATCTTGTTTCACTGTCGTCAGTGTTGGGAAAGGTATGT1740.13306516369309362No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTACACGGAAGACACAGC1690.12924145209271737No Hit
CATAGACGAATTGCCCATGTCAGTAAATCTACGGCAACATATCAGAAGCA1680.1284767097726421No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC1670.12771196745256685No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA1670.12771196745256685No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTACGGCAACATATCAG1660.1269472251324916No Hit
CATAGAGGCACGATCTTGTTTCACTGTGTGGGTAGAGAGTTCTGTAGATG1650.12618248281241637No Hit
CATAGATACCTGTCCTCTGCCTCGAGGAGGAGCTGACTTACTGTTCTATG1640.12541774049234108No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGGATAGCGAGAAGAGTGGAG1620.1238882558521906No Hit
CATAGATCACCAGATGCCAGTTGTGCTACCGTATACTTTTCTAATCAATA1610.12312351353211536No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1600.1223587712120401No Hit
CATAGATCACCAGATGCCAGTTGTGCTACCGTAAGCTTACACTGCACATG1580.1208292865718896No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1580.1208292865718896No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGGAGGAGAATGATATTG1580.1208292865718896No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTTGGGTAGAGAGTTC1550.11853505961166384No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCTCAGAAGTGTATTAATT1540.1177703172915886No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGGGGAAAAGGGATA1530.11700557497151334No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTACGGTAGCTTACACT1530.11700557497151334No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGAGGAGAATGATATTGTT1520.1162408326514381No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGTACTTTTCTAATCAATAGTA1480.11318186337113709No Hit
CATAGAGTGATCCTCCTTTCTCAGCCACACTGACGGCAACATATCAGAAG1460.11165237873098659No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTCATAGGGCACTGAGACCACAT1460.11165237873098659No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCGTGCCCCAGGTAGCAAAACAGAG1440.11012289409083609No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTCTGTTTACTCGGAGA1440.11012289409083609No Hit
CATAGACACACTGACAATTTGCACCTGTACGGCAACATATCAGAAGCATC1420.10859340945068559No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTAGGTAGGAGGAGCTGACTTACTG1380.10553444017038459No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAACCTCCCACCCCAGCTGTCTATG1370.10476969785030933No Hit
CATAGATCCCATACTCCTCCATTACCCTGTGCCTCTATGTGGGAAAGGTA1360.10400495553023409No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTATGTGTAGAACCATGGCAT1360.10400495553023409No Hit
CATAGATATTCTGCCCCCTCCTCTCCCCAGGTAGCAAAACAGAGTCTATG1350.10324021321015883No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTACGATAGCGAGAAGAGTGGAGGCT1340.10247547089008359No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG1330.10171072857000833No Hit
CATAGACCCCCTTGAGTTCACTGGACTGAGGGTCACTGACAGGTCTTAAA1310.10018124392985783No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)