FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806859

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806859
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences136185
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAATCTGCAACAATATCATTCTCCTCTAACTTCATAGCACATCAT109468.037595917318354No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAATTTGCAAATACAGAATCA101927.483937291184785No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACATTAGCTTAGTTAATTA96117.057311745052686No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTCATCTATGA59824.392554246062342No Hit
CATAGAGGATCCCCTGACATTTTGGTTGCCTTTCCTCAGTTCTTTTTCTA57234.202371773690201No Hit
CATAGAAGGTAGGGTACTATTGATTAGAAAAGTATACGGAGATAGAGAGG54313.987957557733965No Hit
CATAGAGTCTGGAGGAAGGTGTCAGCCTCCAGACTCAACCCTTCTATGAG46253.396115578073944No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG45923.3718838344898487No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAACATTAGCTTAGTTAATTAGGGA43073.162609685354481No Hit
CATAGAATACAACACACTCTCTGCCCTGTTCACTCTGATGGTACTTCTAT38852.8527370855821124No Hit
CATAGAACAGTAAGTCAGCTCCTCCTTGGAGAGAAATGCTGCTCTATGAG23581.7314682233726182No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAGTGGCTCACACCTATAATCCCA20741.5229283694973748No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGGTGGCTCACACCTATAATCCCA19361.4215956236002496No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGCAGCAACAAAAGTCACTCCTCT15551.141829129492969No Hit
CATAGATCGGTAAGGAATTTGGCTAGAGGACACTTTGGACTCTGCCTCTA15221.117597385908874No Hit
CATAGAAGGAGCTGGACTGGATGGACTACAAGTACCCACCACCTCTATGA15031.1036457759665161No Hit
CATAGATGGAAATTTTTGGCCAGGCGTGGTGGCTCACACCTATAATCCCA13100.9619267907625656No Hit
CATAGATGCTTCTGATATGTTGCCGTAAGAACATTAGCTTAGTTAATTAG13030.956786723941697No Hit
CATAGATGCTTCTGATATGTTGCCGTATAGATGCTCAGATCTCAAAAGGC12890.9465065902999596No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAACAGCTAAAAATCTTGGAG12460.9149318941146236No Hit
CATAGATCACCCAGCCCATATTGCACAACTGGCATCTGGTGATCTATGAG11010.8084590813966296No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCTACACATAGAACAGCTAAA10850.7967103572346441No Hit
CATAGATTTGTGTGAGAAGGAGCAAGAATTTGCAAATACAGAATCAGTGA10160.7460439842860814No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTTCACTCTGATGGTACTTCT9750.7159378786209935No Hit
CATAGAAGTGACCCTCAGCTCAGTGAAACAAGATCGTGCCTCTATGAGAC9030.6630686198920586No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTGGGGAAAGAGAGCACTCTATGA8900.6535227815104454No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGTGAAACAAGATCGTGCCTCTAT8150.5984506370011381No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGTGGAGGGCTTTGCTGTTTCTAT8030.589639093879649No Hit
CATAGATGCTTCTGATATGTTGCCGTAGATGCTCAGATCTCAAAAGGCTT7450.5470499687924515No Hit
CATAGAGGCAGGTGGGTGGTGGAGGGCTTTGCTGTTTCTATGAGACCAAG7420.5448470830120792No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCACATAGAACAGCTAAA7240.5316297683298454No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGTGTCAGCCTCCAGACTCAACCCTT7020.5154752726071153No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTATAGAACAGCTAAAAAT6960.5110695010463707No Hit
CATAGAATACAACACACTCTCTGCCCTGCACATCTACAAGGACACTCATC6540.48022910012115877No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGACACTTTGGACTCTGCCTCTATGA6340.4655431949186768No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGGTAATGGAGGAGTATGGGATCTAT6190.4545287660168154No Hit
CATAGATGTGCCACATACCTTTCCCAGGACACTTTGGACTCTGCCTCTAT6170.4530601754965672No Hit
CATAGATCCCCATCTTTCCAATGTTTCCTTGGAGAGAAATGCTGCTCTAT6010.44131145133458166No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCCTCTTGTAGAAGGGATGGTCTA5750.4222197745713551No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTGCTGAGATTGGCCTGTG5580.4097367551492455No Hit
CATAGAGGCAGGTGGGTAGTGGAAGGCTTTGCTGTTTCTATGAGACCAAG5460.40092521202775633No Hit
CATAGAGAACAGCCCTGAGAGAATGCCTCTTGTAGAAGGGATGGTCTATG5170.3796306494841576No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTGGGGAAAGAGAGCACTCTATG4990.36641333480192384No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGCAAACTAACACAGAAACAGAA4840.3553989059000624No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTAGTTTTGGTAGAGACAGGGT4560.3348386386165877No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTAGACCAAAGCTAGAAACTCCC4430.3252928002349745No Hit
CATAGATGCCTCAAAGAGCTGAAGACAGCCGCTCACCTCTATGAGACCAA4140.3039982376913757No Hit
CATAGAGCAGCCATAGATAATTAATACACTTCTCCCTCATTATCCCTGTG3660.2687520652054191No Hit
CATAGACTCTGTTTTGCTACCTGGGGTCATTCTTCTCTGGGGGCTCTATG3530.25920622682380584No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAATTTGCAAATACAGAATCAGTG3410.2503946837023167No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTACTCTCAGTTGTGTGTGTGGT3410.2503946837023167No Hit
CATAGAACATCTACAGAACTCTCTACCCATAGAACAGCTAAAAATCTTGG3240.23791166428020707No Hit
CATAGACCCCATGTGCAGTGTAAGCTGAGAAAGGAGGATCACTCTATGAG3240.23791166428020707No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTGTGCCTCTTGTAGAAGGGATG2980.21881998751698056No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCTAACTTCATAGCACATCATGTCT2730.20046260601387816No Hit
CATAGACTAATAGCCTCCCAAAGATTCCTTGGAGAGAAATGCTGCTCTAT2650.19458824393288543No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGTATTTTTGGTAGAGACAGGGT2640.19385394867276132No Hit
CATAGAAGTGACCCTCAGCTCAGTGACATGTGTGAGAGGGAAGGACTCTA2580.18944817711201675No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTGTAGGGTGGGGAAAGAGAGCACT2550.18724529133164444No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTAGACATGTGTGAGAGGGAAGGAC2500.18357381503102396No Hit
CATAGACCTGTGTGTGAGGCATTGTTCCTTGGAGAGAAATGCTGCTCTAT2450.1799023387304035No Hit
CATAGACCTGTGTGTGAGGCATTGTTGGAGACAGCCGCTCACCTCTATGA2390.17549656716965892No Hit
CATAGATGGAAATTTTTGGCCAGGCGCGATGGCTCACACCTATAATCCCA2360.17329368138928664No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAAGGGTGGGGAAAGAGAGCAC2310.16962220508866616No Hit
CATAGACTCTGTTTTGCTACCTGGGGACACTGACGACATGTGTGAGAGGG2300.16888790982854204No Hit
CATAGACTCTGTTTTGCTACCTGGGGTGGGGAAAGAGAGCACTCTATGAG2300.16888790982854204No Hit
CATAGAACAGTCAAATCTCCGAGTAAACAGAAAAGCAAACTAACACAGAA2270.16668502404816976No Hit
CATAGAAGGAGCTGGACTGGATGGACACACTGACGACATGTGTGAGAGGG2200.1615449572273011No Hit
CATAGACGGGCCAGAGAATAGTGCTAGGGTAATGGAGGAGTATGGGATCT2200.1615449572273011No Hit
CATAGACCACCGTGCCCAGATAAGTTTTGGTACTTTTGGTAGAGACAGGG2150.1578734809266806No Hit
CATAGAGCTTTAAGACCTGTCAGTGACCTGGTGGAGGGCTTTGCTGTTTC2130.15640489040643243No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCCCTCATTATCCCTGTGCCTCTAT2120.15567059514630832No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTACAGGGTAATGGAGGAGTATGGG2100.15420200462606012No Hit
CATAGAGCCTCCACTCTTCTCGCTATCGTAGGCTGAGAAAGGAGGATCAC2080.15273341410581193No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGAACAGCTAAAAATCTTGGAGCTC2080.15273341410581193No Hit
CATAGAACATCTACAGAACTCTCTACCCATCTATGAGACCAAAGCTAGAA2010.14759334728494328No Hit
CATAGAAGGAGCTGGACTGGATGGACTGGTGGAGGGCTTTGCTGTTTCTA2010.14759334728494328No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGGGTGGGGAAAGAGAGCACTCTAT1980.145390461504571No Hit
CATAGAACATCTACAGAACTCTCTACCCAGGTGCAAATTGTCAGTGTGTC1980.145390461504571No Hit
CATAGACCCCATGTGCAGTGTAAGCTACCGTAAGGGTGGGGAAAGAGAGC1940.1424532804640746No Hit
CATAGACCTGTGTGTGAGGCATTGTTGCACATCTACAAGGACACTCATCT1900.1395160994235782No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCAGATCTCAAAAGGCTTCTATGA1840.13511032786283364No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGACACTTTGGACTCTGCCTCTATG1800.13217314682233727No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTGTATTTTTGGTAGAGACAGGG1790.13143885156221316No Hit
CATAGACCACCGTGCCCAGATAAGTTTTTTGTATTTTTGGTAGAGACAGG1790.13143885156221316No Hit
CATAGAACAGTAAGTCAGCTCCTCCTATAGAACAGCTAAAAATCTTGGAG1760.12923596578184088No Hit
CATAGATGCCTCAAAGAGCTGGAGACAGCCGCTCACCTCTATGAGACCAA1750.1285016705217168No Hit
CATAGACAGCTGGGGTGGGAGGTTAGGGTAATGGAGGAGTATGGGATCTA1700.1248301942210963No Hit
CATAGAGAACAGCCCTGAGAGAATGCTAGAGAACAGCTAAAAATCTTGGA1700.1248301942210963No Hit
CATAGAGAACAGCCCTGAGAGAATGCGAGAACAGCTAAAAATCTTGGAGC1660.12189301318059993No Hit
CATAGATCACCCAGCCCATATTGCACATCTACAAGGACACTTTGGACTCT1660.12189301318059993No Hit
CATAGACCTGTGTGTGAGGCATTGTTCTGCTGAGATTGGCCTGTGTCTAT1650.12115871792047583No Hit
CATAGATGATCCATCTACCTCTGCTTCAGATATGTTGCCTTTCCTCAGTT1630.11969012740022764No Hit
CATAGATGTGGTCTCAGTGCCCTATGGTGGAGGGCTTTGCTGTTTCTATG1560.11455006057935896No Hit
CATAGAAGTGACCCTCAGCTCAGTGAGACCAAAGCTAGAAACTCCCATCT1510.11087858427873848No Hit
CATAGAAGAGTGTGCTGTGTCTTCCGTATCTGCTGAGATTGGCCTGTGTC1500.11014428901861438No Hit
CATAGAACAGTAAGTCAGCTCCTCCTCATAGAACAGCTAAAAATCTTGGA1480.10867569849836618No Hit
CATAGAGAACAGCCCTGAGAGAATGCTCCTTGGAGAGAAATGCTGCTCTA1450.10647281271799391No Hit
CATAGATGGAAATTTTTGGCCAGGCGCAATGGCTCACACCTATAATCCCA1440.10573851745786982No Hit
CATAGAAATCTGCAACAATATCATTCTCCTCCCTCATTATCCCTGTGCCT1390.10206704115724934No Hit
CATAGACTCTGTTTTGCTACCTGGGGCTGAGAAAGGAGGATCACTCTATG1370.10059845063700114No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)