FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806860

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806860
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences136185
Sequences flagged as poor quality0
Sequence length150
%GC33

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGACATGATGTGCTATGAAGTTAGAGGAGAATGATATTGTTGCAGAT107417.887065388992914No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTGTTTACTCGGAGATTTGA101497.45236259499945No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTGTTTACTCGGAGATTT95286.996365238462386No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAATATGGGCTGGGTGATCTATGT59654.380071226640232No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACCAAAATGTCAGGGGATCCTCTA57394.2141204978521865No Hit
CATAGAACCAACCTCTCTATCTCCGTATACTTTTCTAATCAATAGTACCC53503.928479641663913No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCTCCAGACTCTATGTG46313.4005213496346878No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA45233.3212174615412855No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTGCTCCTTCTCACACA42663.132503579689393No Hit
CATAGAAGTACCATCAGAGTGAACAGGGCAGAGAGTGTGTTGTATTCTAT37662.765355949627345No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGGAGCTGACTTACTGTTCTATGTG23641.7358739949333628No Hit
CATAGATGGGATTATAGGTGTGAGCCACTGCGCCTGGCCAAAAATTTCCA20651.5163197121562582No Hit
CATAGATGGGATTATAGGTGTGAGCCACCGCGCCTGGCCAAAAATTTCCA19501.431875757241987No Hit
CATAGAGGAGTGACTTTTGTTGCTGCACCTTCCACTACCCACCTGCCTCT15731.1550464441752029No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTCTAGCCAAATTCCTTACCGATCTA15081.1073172522671366No Hit
CATAGAGGTGGTGGGTACTTGTAGTCCATCCAGTCCAGCTCCTTCTATGT14931.0963028233652752No Hit
CATAGATCTCCCTAATTAACTAAGCTAATGTTCTTACGGCAACATATCAG12960.9516466571208283No Hit
CATAGATGGGATTATAGGTGTGAGCCACCACGCCTGGCCAAAAATTTCCA12960.9516466571208283No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTATACGGCAACATATCAGAAGC12920.948709476080332No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTGTTTACTCGGAGATTTGACTG12360.9075889415133825No Hit
CATAGATCACCAGATGCCAGTTGTGCAATATGGGCTGGGTGATCTATGTG10820.7945074714542718No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGTAGAGGAGAATGATAT10690.7849616330726585No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTTGCTCCTTCTCACACAAA10060.7387010316848405No Hit
CATAGAAGTACCATCAGAGTGAACAGGAATCTTTGGGAGGCTATTAGTCT9510.6983147923780152No Hit
CATAGAGGCACGATCTTGTTTCACTGAGCTGAGGGTCACTTCTATGTGTA8900.6535227815104454No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTCCACTACCCACCTGCCTCTATGT8850.6498513052098248No Hit
CATAGAAACAGCAAAGCCCTCCACCAACAATGCCTCACACACAGGTCTAT8150.5984506370011381No Hit
CATAGAGGCACGATCTTGTTTCACTGTCTTCAGCTCTTTGAGGCATCTAT8070.5925762749201454No Hit
CATAGAAGCCTTTTGAGATCTGAGCATCTACGGCAACATATCAGAAGCAT7550.5543929213936925No Hit
CATAGAAACAGCAAAGCCCTCCACCACCCACCTGCCTCTATGTGTAGAAC7420.5448470830120792No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGTGAGAAGTGTATTAATTA7130.5235525204684803No Hit
CATAGAAGGGTTGAGTCTGGAGGCTGACACCTTCCACTACCCACCTGCCT7060.5184124536476117No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGAAGTGTATTAATTATCT6930.5088666152659985No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAGGGCAGAGAGTGTGTTGTATTC6510.4780262143407864No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTCCACTACCCACCTGCCTCTATGT6270.46040312809780815No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTGGGAAAGGTATGTGGCACATCTAT6210.4559973565370636No Hit
CATAGATCCCATACTCCTCCATTACCCTTCCACTACCCACCTGCCTCTAT6210.4559973565370636No Hit
CATAGAGCAGCATTTCTCTCCAAGGAAACATTGGAAAGATGGGGATCTAT5990.43984286081433344No Hit
CATAGACCATCCCTTCTACAAGAGGCAACAATGCCTCACACACAGGTCTA5740.4214854793112311No Hit
CATAGACACAGGCCAATCTCAGCAGAAGTGTATTAATTATCTATGGCTGC5530.406065278848625No Hit
CATAGAAACAGCAAAGCCTTCCACTACCCACCTGCCTCTATGTGTAGAAC5430.39872232624738413No Hit
CATAGACCATCCCTTCTACAAGAGGCATTCTCTCAGGGCTGTTCTCTATG5070.37228769688291663No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTACGGAAGACACAGCACA4840.3553989059000624No Hit
CATAGAGTGCTCTCTTTCCCCACCCTAACCTCCCACCCCAGCTGTCTATG4820.35393031537981423No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAACTACAAAACTTATCTGGGCAC4490.3296985717957191No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTAGGAATCTTTGGGAGGCTATTA4290.3150126665932371No Hit
CATAGAGGTGAGCGGCTGTCTTCAGCTCTTTGAGGCATCTATGTGTAGAA4120.3025296471711275No Hit
CATAGAGGCACAGGGATAATGAGGGAGAAGTGTATTAATTATCTATGGCT3710.2724235415060396No Hit
CATAGAGCCCCCAGAGAAGAATGACCCCAGGTAGCAAAACAGAGTCTATG3490.25626904578330945No Hit
CATAGACCACACACACAACTGAGAGTACGATAGCGAGAAGAGTGGAGGCT3450.25333186474281305No Hit
CATAGATCACTGATTCTGTATTTGCAAATTCTCACTGAGCTGAGGGTCAC3330.24452032162132395No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGGGTAGAGAGTTCTGTAGA3250.2386459595403312No Hit
CATAGAGTGATCCTCCTTTCTCAGCTTACACTGCACATGGGGTCTATGTG3240.23791166428020707No Hit
CATAGACCATCCCTTCTACAAGAGGCACAGGAATCTTTGGGAGGCTATTA2980.21881998751698056No Hit
CATAGACATGATGTGCTATGAAGTTAGAGGAGGAGCTGACTTACTGTTCT2670.1960568344531336No Hit
CATAGAGCAGCATTTCTCTCCAAGGAATCTTTGGGAGGCTATTAGTCTAT2650.19458824393288543No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAACTTATCTGGGCAC2640.19385394867276132No Hit
CATAGAGTGCTCTCTTTCCCCACCCTACACGGAAGACACAGCACACTCTT2610.19165106289238903No Hit
CATAGAGTCCTTCCCTCTCACACATGTCACTGAGCTGAGGGTCACTTCTA2520.18504240555127216No Hit
CATAGAGTCCTTCCCTCTCACACATGTCTACGGAAGACACAGCACACTCT2500.18357381503102396No Hit
CATAGAGCAGCATTTCTCTCCAAGGAACAATGCCTCACACACAGGTCTAT2470.18137092925065168No Hit
CATAGATGGGATTATAGGTGTGAGCCATCGCGCCTGGCCAAAAATTTCCA2360.17329368138928664No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTACGATAGCGAGAAGAGTGGAGGC2310.16962220508866616No Hit
CATAGAGGTGAGCGGCTGTCTCCAACAATGCCTCACACACAGGTCTATGT2300.16888790982854204No Hit
CATAGAGTGCTCTCTTTCCCCACCCCAGGTAGCAAAACAGAGTCTATGTG2300.16888790982854204No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTCCCCAGGTAGCAAA2240.16448213826779748No Hit
CATAGATCCCATACTCCTCCATTACCCTAGCACTATTCTCTGGCCCGTCT2220.1630135477475493No Hit
CATAGAGGTTTTCTGTTTCTGTGTTAGTTTGCTTTTCTGTTTACTCGGAG2200.1615449572273011No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGGAGCTGACTTACTGTTCTAT2180.16007636670705291No Hit
CATAGAGTCCTTCCCTCTCACACATGTCGTCAGTGTGTCCATCCAGTCCA2170.1593420714469288No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAGTACCAAAACTTATCTGGGCA2150.1578734809266806No Hit
CATAGAGTGATCCTCCTTTCTCAGCCTACGATAGCGAGAAGAGTGGAGGC2140.15713918566655652No Hit
CATAGAAACAGCAAAGCCCTCCACCAGGTCACTGACAGGTCTTAAAGCTC2130.15640489040643243No Hit
CATAGATCCCATACTCCTCCATTACCCTGTACGGAAGACACAGCACACTC2090.15346770936593604No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCACTGAGCTGAGGGTCACTTC2080.15273341410581193No Hit
CATAGAAACAGCAAAGCCCTCCACCAGTCCATCCAGTCCAGCTCCTTCTA2070.15199911884568784No Hit
CATAGACACACTGACAATTTGCACCTGGGTAGAGAGTTCTGTAGATGTTC2030.14906193780519147No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCATAGATGGGTAGAGAGTTCTG1980.145390461504571No Hit
CATAGAGTGCTCTCTTTCCCCACCCTCACTGAGCTGAGGGTCACTTCTAT1980.145390461504571No Hit
CATAGAGTGCTCTCTTTCCCCACCCTTACGGTAGCTTACACTGCACATGG1970.14465616624444688No Hit
CATAGATGAGTGTCCTTGTAGATGTGCAACAATGCCTCACACACAGGTCT1900.1395160994235782No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTAACCTCCCACCCCAGCTGTCTATG1810.13290744208246136No Hit
CATAGAAGCCTTTTGAGATCTGAGCATTCTCTCAGGGCTGTTCTCTATGT1810.13290744208246136No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAACTTATCTGGGCA1770.12997026104196496No Hit
CATAGAGTGAAACCCTGTCTCTACCAAAAATACAAAAAACTTATCTGGGC1750.1285016705217168No Hit
CATAGAGGTGAGCGGCTGTCTCCAGCTCTTTGAGGCATCTATGTGTAGAA1730.1270330800014686No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCTAGCATTCTCTCAGGGCTGT1710.1255644894812204No Hit
CATAGATCCCATACTCCTCCATTACCCTAACCTCCCACCCCAGCTGTCTA1700.1248301942210963No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATAGGAGGAGCTGACTTACTG1700.1248301942210963No Hit
CATAGACACAGGCCAATCTCAGCAGAACAATGCCTCACACACAGGTCTAT1640.12042442266035173No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTCGCATTCTCTCAGGGCTGTTC1620.11895583214010354No Hit
CATAGAAAAAGAACTGAGGAAAGGCAACATATCTGAAGCAGAGGTAGATG1600.11748724161985535No Hit
CATAGAGGCAGAGTCCAAAGTGTCCTTGTAGATGTGCAATATGGGCTGGG1590.11675294635973126No Hit
CATAGAAACAGCAAAGCCCTCCACCATAGGGCACTGAGACCACATCTATG1580.11601865109960716No Hit
CATAGACACAGGCCAATCTCAGCAGATACGGAAGACACAGCACACTCTTC1490.10940999375849028No Hit
CATAGAGGCACAGGGATAATGAGGGAGGAGAATGATATTGTTGCAGATTT1490.10940999375849028No Hit
CATAGATGGGAGTTTCTAGCTTTGGTCTCACTGAGCTGAGGGTCACTTCT1480.10867569849836618No Hit
CATAGAGCAGCATTTCTCTCCAAGGAGCATTCTCTCAGGGCTGTTCTCTA1480.10867569849836618No Hit
CATAGAGCTCCAAGATTTTTAGCTGTTCTATGAGGAGGAGCTGACTTACT1440.10573851745786982No Hit
CATAGATGGGATTATAGGTGTGAGCCATTGCGCCTGGCCAAAAATTTCCA1430.10500422219774572No Hit
CATAGAGTGATCCTCCTTTCTCAGCCCCAGGTAGCAAAACAGAGTCTATG1370.10059845063700114No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)