FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806867

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806867
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152597
Sequences flagged as poor quality0
Sequence length150
%GC37

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA150329.850783436109491No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG79595.215698866950202No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC75114.922115113665406No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG62784.1141044712543495No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG48923.2058297345295124No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG48253.1619232357123668No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA46723.061659141398586No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA45662.992195128344594No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT38202.5033257534551794No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA35282.3119720571177678No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG34482.25954638688834No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA34172.2392314396744366No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC28801.8873241282594024No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC23811.5603190102033462No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA22071.4462931774543406No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT19051.2483862723382506No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT18631.2208627954678009No Hit
CATAGACCAGCAGACACTCCCATCATCAGGAACCATGGGAGGTCTATGAG18201.1926839977194834No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG17531.1487774989023374No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC17171.125185947299095No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT14550.9534918772977189No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT14490.9495599520305117No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA14100.9240024377936658No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAGGAGCTGAGTCATGGGGTCTATG12790.8381554027929776No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA12520.8204617390905456No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC11570.7582062556931001No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT8730.5720951263786314No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG8370.5485035747753888No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA8140.5334311945844282No Hit
CATAGAGTGCCTGTTTCCTCATTCGTACACTGACGACATGGTTCTACACA7830.513116247370525No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA7750.5078736803475822No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG7740.5072183594697143No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG7190.4711757111869827No Hit
CATAGACCAGCAGACACTCCCATCATATGATGCTGAAGTGATGGGCTAGA6350.41612875744608346No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGATCATTGTTCACTGCA6260.4102308695452728No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA6240.4089202277895372No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT6110.4004010563772551No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTCAAGGGGTAAGGCGTAC5940.3892606014535017No Hit
CATAGATGGCCAAGATACGAGCACATAATAATTCTAACTCAGTCAAATTT5850.3833627135526911No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT5840.38270739267482323No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT5700.37353290038467335No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT4460.2922731115290602No Hit
CATAGACGTGACTAAAAGCATGTTGGTCAGTGTAGGCTAATCTGAAATCT4190.2745794478266283No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGTCATTGTCGCTGTCCCA4180.27392412694876045No Hit
CATAGACATTTAATCCTCACAATGACCCATACACTGACGCTATACCACAC3840.25164321710125365No Hit
CATAGAAGGACAAAGACATTTAGGACCCACACTGAGGAGCTGAGTCATGG3720.24377936656683946No Hit
CATAGACCCAAGACCCCAGCCTTTACTCTCCCAAGTATTAGAGCAAGTTG3720.24377936656683946No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT3560.23329423252095388No Hit
CATAGAAGGACAAAGACATTTAGGACCCATGGCTCAGGTATGTCTTTATT3460.2267410237422754No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC3450.22608570286440757No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA3340.2188771732078612No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGGTCTCAGAGATCCCACCATT3290.21560056881852202No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTACACTGCCCTCTCTGCTGTTCC3260.21363460618491845No Hit
CATAGATGTGTAGCCTGGGTCTGACATACGCTATACCACACTACACACTC3260.21363460618491845No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGACGATCATTGTTCA3170.20773671828410784No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG3030.19856222599395792No Hit
CATAGAGTCCAACTATTCCAGCACCACGCTGTCCTTCTCTGAATCTATGA3010.19725158423822223No Hit
CATAGAGAAGACTCCCTCAACCCACCGTACAAGGGGTAAGGCGTACTGGT2920.19135369633741162No Hit
CATAGATGTGTAGCCTGGGTCTGACAAGGGGTAAGGCGTACTGGTCTATG2910.19069837545954377No Hit
CATAGATCACGTAGAAACTGGAGAGGCACACTGACGACATGGTTCTACAC2890.18938773370380807No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGCTATACCACACTACAC2880.18873241282594022No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGTGTACAAGGGGTAAGGCGT2840.18611112931446883No Hit
CATAGACATTTAATCCTCACAATGACCCATGTCGACAAATGAGAAACCTG2820.18480048755873313No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGACGCTATACCA2800.18348984580299743No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT2680.17562599526858325No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2630.172349390879244No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGGACCTAAGGCTGGTCTCAAA2620.17169407000137618No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA2580.16907278648990476No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC2560.1677621447341691No Hit
CATAGAAAAAACAGTTGGCCAGGCATGGCTCAGGTATGTCTTTATTAGCT2560.1677621447341691No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGACGCTATACCACAC2550.16710682385630124No Hit
CATAGATGTGTAGCCTGGGTCTGACAAATGAGAAACCTGGATGCTTCTAT2550.16710682385630124No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGGAGACAGCCGCTCAC2500.163830219466962No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT2460.1612089359554906No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC2370.15531104805467996No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT2320.15203444366534072No Hit
CATAGAGTGCCTGTTTCCTCATTCGTATGCTGAAGTGATGGGCTAGATCT2310.1513791227874729No Hit
CATAGACATTTAATCCTCACAATGACCCATACACCCACAGCCAGGAAAGA2310.1513791227874729No Hit
CATAGACCTCCGACAGTTTTTATGCACTGGCTCAGGTATGTCTTTATTAG2230.1461365557645301No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGCCCTCTCTGCTGTTCC2230.1461365557645301No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTACCAGTTATTAGTTGAATGA2190.1435152722530587No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA2180.14285995137519086No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA2130.13958334698585162No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTCATTGCTTCTTGTGGTAA2090.13696206347438022No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATGGTTCTACAAAGGATTCT2050.13434077996290886No Hit
CATAGAGTCTGAATGGTGGGAGAGTGCTGAAGTGATGGGCTAGATCTATG2040.133685459085041No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT1980.12975353381783392No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT1960.1284428920620982No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACCCAGGCTACACATCTATCAA1910.12516628767275895No Hit
CATAGAAGCCATGAACACAGGATTGAGGAGCTGAGTCATGGGGTCTATGA1910.12516628767275895No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT1870.12254500416128758No Hit
CATAGAGTCCAACTATTCCAGCACCAGAGATCCCACCATTTGCCATCTAT1860.12188968328341973No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT1820.11926839977194834No Hit
CATAGACGGATTATTCTCTCCATGGTCTACTGCGACATGGTTCTACACAT1740.11402583274900556No Hit
CATAGAGTGCCTGTTTCCTCATTCGTTCTGTTTCCCCACTCAAATACCAT1650.10812794484819492No Hit
CATAGAAAAAACAGTTGGCCAGGCATCTATGGGTCTACCAGTTATTAGTT1630.10681730309245922No Hit
CATAGATGTGTAGCCTGGGTCTGTCATTGTCGCTGTCCCATCTATGAGAC1630.10681730309245922No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGACATGCCAGGAATCAATGT1610.10550666133672351No Hit
CATAGAAATGATGCTGAAGGGTCTGTTTCCCCACTCAAATACCATCTATG1600.10485134045885568No Hit
CATAGATGTTTTATCAAAGGCATGCTCATATTGGGCCCCAGTGTGAATAC1600.10485134045885568No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC1580.10354069870311998No Hit
CATAGATCAAGGAAAACACCAGCCCACACTGACGACATGGTTCTACACAT1540.10091941519164858No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)