FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806873

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806873
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28878
Sequences flagged as poor quality0
Sequence length150
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA28139.74097929219475No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG19786.849504813352725No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG16555.731006302375511No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC14865.1457857192326335No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC14805.125008657109218No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG13444.654061915645128No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT7292.5244130479950133No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG6292.1781286792714174No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT6112.1157974929011703No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA5982.0707805249671027No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT5661.9599695269755524No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA5581.9322667774776647No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA5311.838769997922294No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC4231.4647828797008104No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA2710.9384306392409447No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT2190.7583627675046748No Hit
CATAGATGGCCAAGATACGAGCACATACACTGACGCTATACCACACTACA2100.7271971743195512No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG2090.7237343306323153No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG2090.7237343306323153No Hit
CATAGAGTCCAACTATTCCAGCACCACACTGACGACATGGTTCTACACAT2050.7098829558833715No Hit
CATAGACCAGCAGACACTCCCATCATTTGCCATCTATTGCATGACAGAGC1990.6891058937599557No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT1940.6717916753237758No Hit
CATAGACCCAGATGCTGTCCCACTAAACACTGTCATTGTCGCTGTCCCAT1930.6683288316365399No Hit
CATAGAAAGGTGCAATCAAGCCAGTTACACTGACGACATGGTTCTACACA1810.6267747073897084No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA1790.6198490200152366No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGATCATTGTTCAC1760.6094604889535287No Hit
CATAGACCGCTTCCCAATTTTTGTAACAACACTGGAGACAGCCGCTCACC1720.5956091142045848No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG1680.581757739455641No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG1660.574832052081169No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT1640.5679063647066971No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT1610.5575178336449892No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA1350.4674838977768544No Hit
CATAGATGTTTTATCAAAGGCATGCTCATACACTGACGACATGGTTCTAC1330.4605582104023825No Hit
CATAGAAGCTGAGAAGACTTCCTAATGCAGAAGTAGGAAGTATTACCCCT1330.4605582104023825No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACTTCATCAAGGAAGTTTCT1280.4432439919662026No Hit
CATAGACACAACAGAGAGAACGGGCTAGCAACCCCTGCAGTCTTTGGAGG1250.4328554609044947No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGGACATGCCAGGAATCAATG1200.415541242468315No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCTGTTTCCCCACTCAAATACCATC1120.38783849297042733No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT1120.38783849297042733No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA1090.37744996190871943No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC1020.35321005609806777No Hit
CATAGATGTGTAGCCTGGGTCTGACAGTGTCAAGGGGTAAGGCGTACTGG950.328970150287416No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG900.31165593185123625No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGACATGGTTCTACACA890.30819308816400026No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT880.30473024447676433No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA880.30473024447676433No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT810.2804903386661126No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGCTATACCACACTA760.2631761202299328No Hit
CATAGAAAGGTGCAATCAAGCCAGTTACACTGCCCTCTCTGCTGTTCCTT760.2631761202299328No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA750.2597132765426969No Hit
CATAGAGAAGACTCCCTCAACCCACCGTATCATTTATTTTAAAGGACTGG730.25278758916822497No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA720.24932474548098899No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACACACTGTCATTGTCGCTGTC720.24932474548098899No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCCATAGAGATCCCACCAT680.23547337073204516No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCTATCATCAGGAACCA670.2320105270448092No Hit
CATAGATCATGGGACTTCAGCATGGCATGGTTCTACACATAGAGATCCCA650.2250848396703373No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGTTCTACA630.21815915229586536No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC620.2146963086086294No Hit
CATAGATCATGGGACTTCAGCATGGCTCATGGGCCCCAGTGTGAATACTT610.21123346492139344No Hit
CATAGAGTGTCTGTTTCCCCACTCAAATACCATCTATGAGACCAAGTCTC610.21123346492139344No Hit
CATAGATGGCCAAGATACGAGCACATACACTGCCCTCTCTGCTGTTCCTT600.2077706212341575No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTGTACGCTATACCACACTACA550.1904564027979777No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT510.17660502804903389No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA510.17660502804903389No Hit
CATAGAAATGATGCTGAAGGGCCTGCCGACATGGTTCTACACATAGAAAT500.1731421843617979No Hit
CATAGACTCATTGCACTTTCCACAACTGTATGCTGAAGTGATGGGCTAGA500.1731421843617979No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT500.1731421843617979No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACTGACGACATGGCTCA490.16967934067456195No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG470.16275365330009003No Hit
CATAGATCATGGGACTTCAGCATTGCTTCTTGTGGTAACTGGTCTATGAG460.15929080961285408No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT460.15929080961285408No Hit
CATAGAGTGCCTGTTTCCTCATTCGTAGAGTGTCTGTTTCCCCACTCAAA450.15582796592561812No Hit
CATAGAAATGATGCTGAAGGGCCTGCACACTGACGACATGGTTCTACACA430.1489022785511462No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGAGGTCATCAGGAACCATGGG430.1489022785511462No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT420.14543943486391026No Hit
CATAGAAATGATGCTGAAGGGCCTGCATAGAAATGATGCTGAAGTGATGG400.13851374748943832No Hit
CATAGACAGTGCCTTTGTGCGTGTTACACTGACGACATGGTTCTACACAT370.12812521642773045No Hit
CATAGAAATGATGCTGAAGGGCCTGCTACACATAGAAATGATGCTGAAGT370.12812521642773045No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC360.12466237274049449No Hit
CATAGAAATGATGCTGAAGGGTCTGTTTCCCCACTCAAATACCATCTATG350.12119952905325854No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCACTGACGACATGGTTCTACACAT340.11773668536602258No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCGTCATGTAGGCTAATCT340.11773668536602258No Hit
CATAGAAATGATGCTGAAGGGCCTGGTTCTACACATAGAAATGATGCTGA330.11427384167878663No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGACGACATGGTTCTACAC320.11081099799155066No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC300.10388531061707874No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT300.10388531061707874No Hit
CATAGATCATGGGACTTCAGCATGGCCACTGACGACATGGTTCTACACAT290.10042246692984279No Hit
CATAGATGGCCAAGATACGAGCACATAGAGATCCCACCATTTGCCATCTA290.10042246692984279No Hit
CATAGAGTGCCTGTTTCCTCATTCGTGTCTGTTTCCCCACTCAAATACCA290.10042246692984279No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATGGTTCTACAC290.10042246692984279No Hit
CATAGATGTGTAGCCTGGGTCTACCAGTTATTAGTTGAATGAGCTCTATG290.10042246692984279No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)