FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806877

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806877
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152983
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG2304515.063765254962968No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC56943.72198218102665No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC51733.3814214651301127No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG42222.7597837668237646No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA36172.3643149892471715No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC34972.285874901132806No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA31822.079969669832596No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAACCTGTCTCTACT26111.706725583888406No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA24501.6014851323349653No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA24221.58318244510828No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA23711.5498454076596746No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA21151.3825065530156946No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA18181.1883673349326396No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTCTA17291.1301909362478184No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT16621.0863952203839642No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT16611.0857415529830112No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA16051.0491361785296405No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT15180.9922671146467255No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA14980.9791937666276646No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCTCTA14480.9465103965800121No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGTTGCTTCCTTCTGCTGGCTATTC14260.9321297137590451No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA12180.7961668943608113No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT10300.6732774229816385No Hit
CATAGATCATGGGACTTCAGCATGGCACCTTCCTAACCATGGGCATATCT8740.5713053084329631No Hit
CATAGACCTTTGGGTTCATATCATCTGGTACGGTAGATGGAGACAGCCGC7600.4967872247243158No Hit
CATAGACCAATAAAAGTTGATGGGATGAACCTGGAGACAGCCGCTCACCT6620.43272781943091715No Hit
CATAGACCTTTGGGTTCATATCATCTGGACACTGACTGATACAGGAAGGC6050.3954687775765935No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG5960.38958577096801605No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGAGGTGGAGACAGCCGCTCAC5850.3823954295575326No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC5730.37455142074609593No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT5230.3418680506984436No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTCTCTAAATATACACTCA5080.3320630396841479No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGAATCCTTTCCCTCACTCT4510.29480399782982425No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG4440.2902283260231529No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGAGACAGCCGC4150.2712719713955145No Hit
CATAGAGGATCCCATCTGAGTTGGTCAAAGTCTGTGAGTAAAGTGCTAAT4140.2706183039945615No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAT3890.25427661897073534No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGTATAAATGACCTTCTCTT3880.25362295156978226No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT3620.23662759914500303No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT3340.2183249119183177No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTGTGAGTTGCTGATG3180.20786623350306896No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC3170.2072125661021159No Hit
CATAGATCATGGGACTTCAGCATGGCTCCTTTCCCTCACTCTCTCCATCT3160.2065588987011629No Hit
CATAGATCATGGGACTTCAGCATGGCCTTGGTCTCATGGAGACAGCCGCT3000.19610022028591412No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCGTCTCTA2990.19544655288496107No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCGTCTCTA2930.19152454847924277No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGTGGTGTGGTG2920.19087088107828976No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT2920.19087088107828976No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTTGTAGAGACAGAGTT2910.19021721367733668No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATAGTGAAACCCCATCTCTA2830.18498787446971232No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA2820.18433420706875928No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA2810.18368053966780623No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA2770.18106587006399402No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCTGGAGACAGCCGCTCACCTCTAT2700.1764901982573227No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT2660.17387552865351052No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2560.16733885464398005No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG2550.166685187243027No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCTGTCTCTA2540.16603151984207395No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCTGTCTCTA2510.16407051763921482No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCGAAACCCCATCTCTA2500.16341685023826175No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA2460.16080218063444957No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT2430.15884117843159043No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATGAAACCCCATCTCTA2410.15753384362968434No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGGGTT2380.1555728414268252No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA2330.15230450442205995No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTACAAGCAATGGGGAAAGGAT2300.15034350221920081No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAACCCCATCTCTA2300.15034350221920081No Hit
CATAGATCATGGGACTTCAGCATGGCCAATATGGTGAAACCCTGTCTCTA2290.1496898348182478No Hit
CATAGATGTCCATCATGTGGAAGCTGGCGAAACCACAGGGAATCAGGATG2270.14838250001634168No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCGGATTTGGACCTGCG2250.1470751652144356No Hit
CATAGAGGATCCCATCTGAGTTGGTCTTGGTCTCATAGAATCCTTTCCCT2180.14249949340776427No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGAGAAACCCCATCTCTA2150.14053849120490514No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCGTCCCTA2080.1359628193982338No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCGACAAGCAATGGGGAAAGG2020.13204081499251552No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC1980.1294261453887033No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATTTGGAGACAGCCGCTC1980.1294261453887033No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTTGTCTCTA1960.12811881058679722No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAATCCCATCTCTA1910.124850473582032No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA1910.124850473582032No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCGTCTCTACTAACAATA1890.12354313878012589No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGTACTGGTACCAAAACAG1850.12092846917631371No Hit
CATAGACACCATGCCTGGCTAATTTTTCGTATTTTTAGTAGAAACAGCGT1780.11635279736964238No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAAATATACAATCA1780.11635279736964238No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATCTGTTATTCAAAGGTTTT1770.11569912996868933No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTGGAGACAGCCG1750.11439179516678323No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCCATCTGTA1620.10589411895439362No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCTTGACTCCACTAAAAATA1600.10458678415248754No Hit
CATAGATCATGGGACTTCAGCATGGCGAAACCCCATCTCTACCAAAAATA1590.10393311675153448No Hit
CATAGATCATGGGACTTCAGCATGGCCAACGTGGTGAAACCCCATCTCTA1580.10327944935058145No Hit
CATAGATGAAAGCCTGTTGAATTTATGATCTATCCAGGAATTTTATTTTA1570.10262578194962838No Hit
CATAGATCATGGGACTTCAGCATGGCAAAACCCCGTCTCAACTAGAAATA1540.10066477974676924No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1530.10001111234581621No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)