FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806878

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806878
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152983
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2178514.240144329762131No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA90145.892157952190766No Hit
CATAGAGGTGAGCGGCTGTCTCCATTCAACTTTCCTTGGCTCTATGTGTA49943.264415000359517No Hit
CATAGAGGTGAGCGGCTGTCTCCAAACTGGACAATGAGAGGATCTATGTG39652.5917912447788316No Hit
CATAGAGGTGAGCGGCTGTCTCCATGCTGAAGTCCCATGATCTATGTGTA33832.2113568174241585No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGAAAG29291.9145918173914749No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGAATTACAGGTGCCCGCCAC26501.7322186125255747No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAGCCCAGGTCTATGTGTAGA24151.5786067733016087No Hit
CATAGATTGCATAGCCATGTATAGCCCCTAAGCCCAGGTCTATGTGTAGA24121.5766457710987496No Hit
CATAGAGGTGAGCGGCTGTCTCCAGATGATATGAACCCAAAGGTCTATGT23201.516508370211069No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTTGTATATCT19771.292300451684174No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGGTCAGGAGATTGAGACCATCCTG18801.2288947137917285No Hit
CATAGATTGCATAGCCATGTGTAGCCATGCTGAAGTCCCATGATCTATGT18131.1850989979278743No Hit
CATAGACCAGACTTTTGAAAGAAGCACACAAAAAGGGCATCTATGTGTAG16491.0778975441715748No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTCTACT15591.0190674780858004No Hit
CATAGATTGCATAGCCATGTGTAGCCCCTAAAGCCCTTGTGAAGTTCTAT14900.9739644274200401No Hit
CATAGAATAGCCAGCAGAAGGAAGCAACTTGGAAGTTAGGAAGCCAGCTC13750.8987926763104398No Hit
CATAGAGGTGAGCGGCTGTCTCCATCACTTATACGCCTCCCTGTCTATGT11860.7752495375303138No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTGCAGGCGCATGCTTG10450.6830824339959342No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCAC8290.5418902753900761No Hit
CATAGATATGCCCATGGTTAGGAAGGTGCCATGCTGAAGTCCCATGATCT7760.5072459031395645No Hit
CATAGAGGTGAGCGGCTGTCTCCATCTACCGTACCAGATGATATGAACCC7270.47521620049286517No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGTTCATCCCATCAACTTTTATTGGT6570.4294594824261519No Hit
CATAGAGGCGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA6570.4294594824261519No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACGACAGCCCGGCTACTG5950.388932103567063No Hit
CATAGAATAGCCAGCAGAAGGAAGCAGGAATTAGACTCTTGACATCTATG5820.38043442735467337No Hit
CATAGAGGTGAGCGGCTGTCTCCACCTCTCCAGATGATATGAACCCAAAG5750.3758587555480021No Hit
CATAGAAAGGCCTTCCTGTATCAGTCAGTGTCCAGATGATATGAACCCAA5640.36866841413751855No Hit
CATAGAATCCTTTCCCCATTGCTTGCTCATTATTATTGGATGGGATCTAT5090.332716707085101No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAATTTGTTAAAAGAGG5050.3301020374812888No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCTGCCAC4700.30722367844793214No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAGGTTTGTCAAAGATCA4440.2902283260231529No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGACCAACTCAGATGG4410.28826732382029374No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCCACCAC4400.28761365641934067No Hit
CATAGACCTCCTGTTTGACCATTTTGAACATAGCCTTTGGGGTTTCTATG4300.28107698240981027No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAAATTAGCCAGGCA4220.27584764320218585No Hit
CATAGATGAAAAGTCAAGCCAGCACAAATATTTGGAAACTAATTCCACTG4140.2706183039945615No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCAACATGGTG3970.2595059581783597No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCGCCAC3900.25493028637168835No Hit
CATAGACATGCTAACATTTCTGGGGATACTTGGTCTCATAGACATGCTAA3790.24773994496120486No Hit
CATAGAAAGAGACAGAAGAGAAGGTCATTTATACGGGAGCAGGAATTAGA3720.2431642731545335No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGTGCCAC3540.23139825993737867No Hit
CATAAATTCAACAGGCTTTCATCTATGTGTAGAACCATGTCGTCAGTGTA3460.22616892072975428No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCTGCCAC3380.22093958152212992No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCACCAC3330.21767124451736466No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTATAGGTACTAATTTT3330.21767124451736466No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACCTGCCAC3200.20917356830497508No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCCTGCTAT3120.2039442290973507No Hit
CATAGATGGAGAGAGTGAGGGAAAGGAGCCATGCTGAAGTCCCATGATCT3030.19806122248877325No Hit
CATAGATGCATCAGCAACTCACAGATTGCATAGCCATGCTGAAGTCCCAT2970.19413921808305498No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA2920.19087088107828976No Hit
CATAGAGGTGAGCGGCTGTCTCCATGAGACCAAGGCCATGCTGAAGTCCC2890.18890987887543062No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGTGCACACCAC2870.1876025440735245No Hit
CATAGAGCAGAAAACCTTTGAATAACAGAATAGAGCAGGAATTAGACTCT2850.1862952092716184No Hit
CATAGACTGTCATTGCTTGCCCATTGCTCATTATTATTGGATGGGATCTA2790.18237320486590014No Hit
CATAGATTGCATAGCCATGTGTAGCCAGATGATATGAACCCAAAGGTCTA2750.17975853526208796No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAACTTTGCCCCAAAAGAGGTTCTAT2650.17322186125255748No Hit
CATAGAATCCTTTCCCCATTGCTTGTACACTGGGGACTGTGACTCTGTTT2620.17126085904969834No Hit
CATAGAATTCTTTCCCCATTGCTTGTTTTTCTCAGGTTTGTCAAAGATCA2560.16733885464398005No Hit
CATAGACCATCCAGAGGTAATTCTGCTCATTATTATTGGATGGGATCTAT2540.16603151984207395No Hit
CATAGACTGTCATTGCTTGCCCATTGCTTGCTCATTATTATTGGATGGGA2540.16603151984207395No Hit
CATAGAAGTTCTGATCCACATTCACGTATAGCCCCTAAGCCCAGGTCTAT2520.16472418504016786No Hit
CATAGATTGAGCTTAAATGATCTGTGCAAGACTAGGCAATTTACAAATCT2400.1568801762287313No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCACCAC2380.1555728414268252No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGAGTTGGAGCTGGTGAGATGTGTAG2310.1509971696201539No Hit
CATAGATATGCCCATGGTTAGGAAGGCAGCTTCCACATGATGGACATCTA2240.14642149781348254No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTACCTCTACT2190.14315316080871732No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCCAC2120.138577489002046No Hit
CATAGATGGAGAGAGTGAGGGAAAGGATTCTATGAGACCAAGACCAACTC2040.1333481497944216No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGTGCACCAC1990.13007981278965636No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGCACCAC1970.12877247798775027No Hit
CATAGAATCCTTTCCCCATTGCTTGTCGGGAGCAGGAATTAGACTCTTGA1970.12877247798775027No Hit
CATAGAATCCTTTCCCCATTGCTTGTTTTTGTCAAGAAGTCAAATTGTCC1890.12354313878012589No Hit
CATAGAGGTGAGCGGCTGTCTCCAAATCTATGAGACCAACTCAGATGGGA1870.12223580397821979No Hit
CATAGAGGTGAGCGGCTGTCTCCACTAAAAATACAAAAAATTAGCCAGGC1770.11569912996868933No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGAGATTACAGGCATGCGCCAC1750.11439179516678323No Hit
CATAGATGAAAAGTCAAGCCAGCACACTCTAGCAGATCACGAGGTGAGGA1730.11308446036487714No Hit
CATAGAGGTGAGCGGCTGTCTCCACACTGGACAATGAGAGGATCTATGTG1700.11112345816201799No Hit
CATAGAGCAGAAAACCTTTGAATAACAGATAGAGCAGGAATTAGACTCTT1690.11046979076106496No Hit
CATAGACATGCTAACATTACTGGGGACTGTGACTCTGTTTTCTATGTGTA1690.11046979076106496No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGCGCCAC1670.10916245595915886No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACATGCCAC1630.10654778635534667No Hit
CATAGACATGCTAACATTTCTGGGGATACTGGGGACTGTGACTCTGTTTT1620.10589411895439362No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGTGCCAC1580.10327944935058145No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGTGCCCACCAC1560.10197211454867534No Hit
CATAGATGAAAAGTCAAGCCAGCACAGTGTTTGAGATCAGCCTAGCCAAC1540.10066477974676924No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCACAGAGCCTTCAGGTCA1530.10001111234581621No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGGGATTAATACAAAAAATTAG1530.10001111234581621No Hit
CATAGACTGCCTCAGCCTCCTGAGTAGCTGCGATTACAGGCGCCTGCCAC1530.10001111234581621No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)