FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806881

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806881
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74733
Sequences flagged as poor quality0
Sequence length150
%GC36

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGCCATCACA1438219.244510457227733No Hit
CATAGAAGAGTGAGACTTGAGATGGGATCAGACTTTATGTGCAATCTATG59808.001819811863568No Hit
CATAGACTTCAGCCCTCACAAGCCTTACCTCAAATGCCAGGCTCTATGAG35174.706087003064242No Hit
CATAGAAAATAATGTGGCCGGGCATTGCTCTTGACATCTCTATGAGACCA34934.6739726760601075No Hit
CATAGAGGGTGCTCCTGTGCTGGGTAGTGGTAGTCTATGAGACCAAGTCT31214.1762006074960185No Hit
CATAGAGCCACCATGTACTTCTATATAGCTTCTCTGACTGTGTTAATTTA22292.982618120509012No Hit
CATAGACACATGTAGGATGGGGTGGAGGATGATCAATGCTGCTTCTATGA21682.9009942060401697No Hit
CATAGACACATGTAGGATGGGGTGGCTGGGCATTGCTCTTGACATCTCTA20172.698941565305822No Hit
CATAGAGGGTGCTCCTGTACTGGGTAGTGGTAGTCTATGAGACCAAGTCT16622.2239171450363293No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGACTGTGTTAATTTAAAAGAACA15112.021864504301982No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTCTGACTGTGTTAATTTAAAAGAA12691.6980450403436234No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTAGTCTATGAGACCAAGTCT11661.5602210536175452No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTACACTGACGACATG10931.4625399756466353No Hit
CATAGAAAATAATGTGGCTGGGCATTGCTCTTGACATCTCTATGAGACCA10201.3648588976757257No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAATGCCATGATTGTAAGTTTCT9221.2337253957421754No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTGGAGGATGATCAAT7841.049068015468401No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGTGCTGGGTAGTGGTAGTCT7751.0370251428418502No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC7711.031672755007828No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGGTCTCTGACTGTGTTAATT7671.0263203671738055No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGCCATCACAGTTCATTG7130.9540631314145023No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGGATGATCAATGCTGCTTCTAT6250.8363105990660082No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTTCCCTTGGCTGTC5770.7720819450577389No Hit
CATAGACTTCAGCCCTCACAAGCCTTGGTATATTTTCTAAAGCCTGGGAT5160.6904580305888964No Hit
CATAGACACATGTAGGATGGGGTGGCAGACAGGATGCGCAGATGGTCTAT4600.6155246009125821No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTTCCATGTGTGTGCG4550.608834116120054No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACAGGTCTGTTCGGCCACTCA4500.602143631327526No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTATATTTTCTAAAGCCTGGGATC4400.5887626617424699No Hit
CATAGAGGTGTCCTTTCCCCACTTTACACTGACGACATGGTTCTACACAT4240.56735311040638No Hit
CATAGAAAATAATGTGGCCGGGCATGGGCATTGCTCTTGACATCTCTATG4210.5633388195308632No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGGAGGATGATCAATGCTGCT3810.5098149411906386No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTAGGTCTGTTCGGCCACTCATG3600.4817149050620208No Hit
CATAGAAGCATGGAAGACAAACAGCATGGAGACAGCCGCTCACCTCTATG3510.46967203243547023No Hit
CATAGATCCACAAAGACCAAGAGTGTCAAAGGTCAAGGTGGGAGGATGGT3140.42016244497076255No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACACTGGAGACAGCCGCTCA2810.37600524534007734No Hit
CATAGAGCTATCTGGCAAAAACCCATCGGTCTCATGGAGGATGATCAATG2750.3679766635890437No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTCACTGACGACATGG2510.33586233658490894No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTGCTGGAGGATGATCAATGCT2440.3264956578753696No Hit
CATAGACACATGTAGGATGGGGTGGGCATTGCTCTTGACATCTCTATGAG2350.31445278524881914No Hit
CATAGACACATGTAGGATGGGGTGGCTGTCATGATTATCACCTTCTATGA2310.30910039741479667No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTTCTACA2190.29304323391272935No Hit
CATAGAAAGTCTGGACCAAGTGCCTCTGCTACCGTAGGTCTGTTCGGCCA2160.2890289430372125No Hit
CATAGATGAAAGACAAGCAGGGAAGCCAGACAGGATGCGCAGATGGTCTA2110.2823384582446844No Hit
CATAGAGCATTACCCTCAAACTATCCCTACCGTATGGAGGATGATCAATG1980.26494319778411146No Hit
CATAGACACATGTAGGATGGGGTGGTTATGTAGACAGGGATTGATCTCTA1870.2502241312405497No Hit
CATAGAACTCCATCATAAGTCAAAGAGCATTACCCTCAAACTATCCTCTT1870.2502241312405497No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGTGGTATATTTTCTAAAGCCTGGG1870.2502241312405497No Hit
CATAGAAAGTCTGGACCAAGTGCCTTACCTCAAATGCCAGGCTCTATGAG1860.24888603428204406No Hit
CATAGATCATGGGACTTCAGCATGGTATATTTTCTAAAGCCTGGGATCTA1850.24754793732353844No Hit
CATAGAACCAAAAATGGCTAGGCATGGGCATTGCTCTTGACATCTCTATG1840.24620984036503288No Hit
CATAGACACATGTAGGATGGGGTGGCTGCCATGATTGTAAGTTTCTTGAG1840.24620984036503288No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTATATTT1810.242195549489516No Hit
CATAGAAGAGTGAGACTTGAGATGGGAGGATAGGTCAAGGTGGGAGGATG1750.23416696773848233No Hit
CATAGATCCACAAAGACCAAGAGTGTCTTAGGTCAAGGTGGGAGGATGGT1730.2314907738214711No Hit
CATAGATCATGGGACTTCAGCATGGGCATTGCTCTTGACATCTCTATGAG1630.21810980423641496No Hit
CATAGAGGGTGCTCCTGTACTGGGTGGAGACAGCCGCTCACCTCTATGAG1610.21543361031940372No Hit
CATAGACACATGTAGGATGGGGTGGAGACAGCCGCTCACCTCTATGAGAC1600.21409551336089816No Hit
CATAGAGCATTACCCTCAAACTATCCCTACCGTACTGGTATATTTTCTAA1560.20874312552687568No Hit
CATAGAGGTGTCCTTTCCCCACTTTAACACTGACGACATGGTATATTTTC1480.1980383498588308No Hit
CATAGAGGTAAACAAAATAAGACATTACATAGGAGTCTCTGACTGTGTTA1470.19670025290032517No Hit
CATAGAAGCATGGAAGACAAACAGCAACACTGGGCATTGCTCTTGACATC1420.19000976810779707No Hit
CATAGATCATGGGACTTCAGCATGGCTGCCATGATTGTAAGTTTCTTGAG1370.18331928331526903No Hit
CATAGAACTTCAATGCTGTGTTAAAATGCTACCGTATGGTATATTTTCTA1330.17796689548124658No Hit
CATAGACACATGTAGGATGGGGTGGTATATTTTCTAAAGCCTGGGATCTA1290.1726145076472241No Hit
CATAGAGGTAACAAAATAAGACATTACATAGGAGTACACTGCCATCACAG1240.16592402285469604No Hit
CATAGAGCATTACCCTCAAACTATCCCTACACTGACGACATGGTTCCATG1210.1619097319791792No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGACAGGATGCGCAGATGGTCT1190.15923353806216797No Hit
CATAGAACTCCATCATAAGTCAAAGAGCAGTCTCTGACTGTGTTAATTTA1180.15789544110366235No Hit
CATAGATCATGGGACTTCAGCATGGCTGTCATGATTATCACCTTCTATGA1140.15254305326963993No Hit
CATAGATCATGGGACTTCAGCATGGTTATGTAGACAGGGATTGATCTCTA1120.1498668593526287No Hit
CATAGAGCTATCTGGCAAAAACCCATCACACTGCCATCACAGTTCATTGT1100.14719066543561748No Hit
CATAGAGGTAAACAAATAAGACATTACATAGGAGTACACTGCCATCACAG1080.14451447151860625No Hit
CATAGACTGGTCTCGAACTCCCAACCACCTATCTACCCCCGGTCTATGAG1060.141838277601595No Hit
CATAGACACATGTAGGATGGGGTGGCTCCTGTGCTGGGTAGTGGTAGTCT990.13247159889205573No Hit
CATAGAGCTATCTGGCAAAAACCCATCGAGCTATCCTCTTGCCTCCGTCC960.12845730801653887No Hit
CATAGAAAGTCTGGACCAAGTGCCTCAAATGCCAGCAAGGGAACAAAACT950.12711921105803325No Hit
CATAGAAAATAATGTGGCCGGGCATGGTTATGTAGACAGGGATTGATCTC910.1217668232240108No Hit
CATAGAGCTATCTGGCAAAAACCCATCCTACATGTGTCTATGTGTAGGTC850.11373824147297713No Hit
CATAGATCCACAAAGACCAAGAGTGTCTCTGACTGTGTTAATTTAAAAGA810.10838585363895467No Hit
CATAGAACTGTTTAAGAGAAGTCAGCGATGTTCCATGTGTGTGCGATGTT760.10169536884642662No Hit
CATAGAGGGTGCTCCTGTACTGGGTGCTCCTGTACTGGGTGCTCCTGTAC760.10169536884642662No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)