FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806895

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806895
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences220216
Sequences flagged as poor quality0
Sequence length150
%GC36

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCTTGGGTGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA2367910.75262469575326No Hit
CATAGACGGATTATTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC140236.367838849129945No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG133346.054964216950631No Hit
CATAGAGAAGACTCCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG117305.326588440440295No Hit
CATAGATCATGGGACTTCAGCATGGCTCAGGTATGTCTTTATTAGCTCTA85313.8739237839212413No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGTTCTGGGCCCCAGTGTGAA77253.5079194972209105No Hit
CATAGAAATGATGCTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG75643.4348094598031023No Hit
CATAGATGTTTTATCAAAGGCATGCTCATTTATTTTAAAGGACTGGAAGC71503.246812220728739No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAAGGAAGTTTCTGTGAGATC71313.2381843281142153No Hit
CATAGATCACGTAGAAACTGGAGAGGCTAATCTGAAATCTTCGTGTTCTA70743.2123006502706435No Hit
CATAGAAGTCACGAGTTTTGTTGTTGTTCTTCCTTTTCTGCCTTCATCTA60942.7672830312057255No Hit
CATAGATGTTTTATCAAAGGCATGCTCATCAGGAACCATGGGAGGTCTAT52402.3794819631634394No Hit
CATAGACTCATTGCACTTTCCACAACTGTGTGCTTGAACCAGATTCTATG48382.196933919424565No Hit
CATAGACTCATTGCACTTTCCACAACTGTCCCAACTGTCTCTGAAAAATT46712.121099284339013No Hit
CATAGACTCATTGCACTTTCCACAACTGTCATTGTCGCTGTCCCATCTAT45492.0656991317615434No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGAAGTGATGGGCTAGATCTATGA38421.7446507065789953No Hit
CATAGACGTGACTAAAAGCATGTTGGTGGAAGGGTAAGAGAGGGTCTATG30831.399989101609329No Hit
CATAGAGTCTGAATGGTGGGAGAGTGAAAGAAATCTACAAAGGATTCTGG25451.1556835107349148No Hit
CATAGAAATGATGCTGAAGGGCCTGTTTCCCCACTCAAATACCATCTATG25001.1352490282268317No Hit
CATAGATCAAGGAAAACACCAGCCCACGCTGTCCTTCTCTGAATCTATGA24141.0961964616558288No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTGCCTCTAAGTAAACTGAAT23031.0457914048025576No Hit
CATAGACCTCCGACAGTTTTTATGCACCTTCATTGTTGCTCTATGAGACC15110.6861445126602972No Hit
CATAGAAGCCATGAACACAGGATTGATAGGCTTAGAGGGCTTGCTCTATG14500.6584444363715625No Hit
CATAGAGGAGGTGAAAGAAATCTACAATGGGCCCCAGTGTGAATACTTCT14280.6484542449231664No Hit
CATAGAGCTTTTTCTCCAGCCTCCAAGGGGTAAGGCGTACTGGTCTATGA13250.6016819849602209No Hit
CATAGATGTGTAGCCTGGGTCTGACATGCCAGGAATCAATGTTCTATGAG13160.5975950884586043No Hit
CATAGAAGGACAAAGACATTTAGGACCCTGCAGTCTTTGGAGGAATCTAT12320.5594507211101827No Hit
CATAGACCAGCAGACACTCCCATCATCAAGGAAGTTTCTGTGAGATCTAT12060.5476441312166237No Hit
CATAGACCAGCAGACACTCCCATCATTTATTTTAAAGGACTGGAAGCCTC11670.5299342463762852No Hit
CATAGAAAATTTGTGATGGTAAATCATGGGACATGCCAGGAATCAATGTT10320.4686307988520362No Hit
CATAGAGCTGTACTGCATCTTTTCTCAAACTGCTGGGGTTGCTCTATGAG8310.3773567769825989No Hit
CATAGAAATGATGCTGAAGGGCCTGCGATGCTGAAGTGATGGGCTAGATC7260.32967631779707196No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCCCAACTGTCTCTGAAAAAT7170.3255894212954554No Hit
CATAGAGAAGACTCCCTCAACCCACGCTGTCCTTCTCTGAATCTATGAGA6900.3133287317906056No Hit
CATAGACCAACATTTCTTCTCCCAGGGTGGAAGGGTAAGAGAGGGTCTAT6810.309241835288989No Hit
CATAGAGCTTGGGCGCGAACATCAAGGAAGTTTCTGTGAGATCTATGAGA6740.30606313800995383No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGCTGAAGTGATGGGCTAGATCTA6020.2733679659970211No Hit
CATAGACACAACAGAGAGAACGGGCTACACTGACGCTATACCACACTACA5750.2611072764921713No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGCCCTCTCTGCTGTTCCTT5580.25338758310022885No Hit
CATAGAAATGATGCTGAAGGGCCTGCTGATGCTGAAGTGATGGGCTAGAT5490.24930068659861226No Hit
CATAGACTCATTGCACTTTCCACAACTGTTCTTCCTTTTCTGCCTTCATC5120.23249900098085513No Hit
CATAGAAATGATGCTGAAGTGATGGGCTAGATCTATGAGACCAAGTCTCT4960.22523340720020346No Hit
CATAGACCTCCGACAGTTTTTATGCACCCACAGCCAGGAAAGAATCTATG4730.2147891161405166No Hit
CATAGATCAAGGAAAACACCAGCCCACCCACAGCCAGGAAAGAATCTATG4490.203890725469539No Hit
CATAGACCGCTTCCCAATTTTTGTAACACACTGCCCTCTCTGCTGTTCCT4370.19844153013405022No Hit
CATAGACCAGCAGACACTCCCATCATATAGACCAGCAGCATAATTTCCCA4190.19026773713081702No Hit
CATAGACGGATTACTCTCTCCATGGTCTACCAGTTATTAGTTGAATGAGC3820.1734660515130599No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGAAGTAGGAAGTATTACCCCTCT3620.16438405928724525No Hit
CATAGAAATGATGCTGAAGGGCCTGCACATAGAAATGATGCTGAAGTGAT3510.1593889635630472No Hit
CATAGAGCTTTTTTTCCAGCCTCCAAGTAATAACCAGGCCCCTCTATGAG3490.1584807643404657No Hit
CATAGATTGTGTGTCTCTTCTATATTAACAGTCACACTGACGCTATACCA3350.15212336978239546No Hit
CATAGAGTCTGAATGGTGGGAGAGTGATAGGCTTAGAGGGCTTGCTCTAT3330.151215170559814No Hit
CATAGAAATGATGCTGAAGGGCCTGCACTGACGACATGGTTCTACACATA3150.1430413775565808No Hit
CATAGAGAAGACTTCCTCAACCCACCCACAGCCAGGAAAGAATCTATGAG3120.1416790787227086No Hit
CATAGACCAGCAGACACTCCCATCATACACTGACGCTATACCACACTACA3120.1416790787227086No Hit
CATAGACCAACATTTCTTCTCCCAGGGTACACTGACGACATGGCTCAGGT3020.1371380826098013No Hit
CATAGAAATGATGCTGAAGGGCCTGCTCTACACATAGAAATGATGCTGAA2940.13350528571947542No Hit
CATAGAGATCCCACCATTTGCCATCTATGAGACCAAGTCTCTGCTACCGT2920.13259708649689397No Hit
CATAGAGCTGTACTGCATCTTTTCTCAGACTGCTGGGGTTGCTCTATGAG2890.13123478766302177No Hit
CATAGAGAAGACTCCCTCAACCCACCACACTGACGATCATTGTTCACTGC2800.12714789116140518No Hit
CATAGACCTCCGACAGTTTTTATGCACTGTCATTGTCGCTGTCCCATCTA2770.12578559232753297No Hit
CATAGACCAACATTTCTTCTCCCAGGGTCTCTCTTACCCTTCCCCACACC2760.12533149271624222No Hit
CATAGAGTAGTTAAAACCCACAATGACAGTTTTTGTGCACCTTCATTGTT2740.12442329349366078No Hit
CATAGACGTGACTAAAAGCATGTTGGTACACTGACGACATGGTTCTACAC2710.12306099465978856No Hit
CATAGACTCATTGCACTTTCCACAACTGTCTCTGTCCCAACTGTCTCTGA2660.12079049660333491No Hit
CATAGAAATGATGCTGAAGGGCCTGCTAGAAATGATGCTGAAGTGATGGG2630.1194281977694627No Hit
CATAGAGTGCCTGTTTCCTCATTCGTCAGTGTGGACATGCCAGGAATCAA2540.11534130126784611No Hit
CATAGACTCATTGCACTTTCCACAACTGCCCTCTCTGCTGTTCCTTCTAT2430.11034620554364806No Hit
CATAGACCTCCGACAGTTTTTGTGCACCTTCATTGTTGCTCTATGAGACC2410.1094380063210666No Hit
CATAGACGTGACTAAAAGCATGTTGGTGCATTACAGAGAGGAGATCTATG2360.10716750826461294No Hit
CATAGAAATGATGTTGAAGGGCCTGCCCTCTCTGCTGTTCCTTCTATGAG2340.10625930904203146No Hit
CATAGAAATGATGCTGAAGGGCCTGCAGTCTTTGGAGGAATCTATGAGAC2310.10489701020815927No Hit
CATAGAAATGATGCTGAAGGGCCTGTGCTGAAGTGATGGGCTAGATCTAT2260.1026265121517056No Hit
CATAGACCCAAGACCCCAGCCTTTACACTGACGACATGGTTCTACACATA2260.1026265121517056No Hit
CATAGAAATGATGCTGAAGGGCCTGGATGCTGAAGTGATGGGCTAGATCT2220.10081011370654266No Hit
CATAGACTCATTGCACTTTCCACAACTGTACACTGACGCTATACCACACT2210.10035601409525194No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)