FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806896

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806896
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences220216
Sequences flagged as poor quality0
Sequence length150
%GC33

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCTCACAGAAACTTCCTTGATGTTCGCACCCAAGCTCTATGTGT2426711.01963526719221No Hit
CATAGAGCTCATTCAACTAATAACTGGTAGACCATGGAGAGAATAATCCG144416.557652486649472No Hit
CATAGAGGGGCCTGGTTATTACTTGGAGGCTGGAGAAAAAGCTCTATGTG135576.156228430268464No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGTTGAGGGAGTCTTCTCTATGTG116635.296163766483816No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGCTGAAGTCCCATGATCTA85403.8780106804228573No Hit
CATAGAAGGAACAGCAGAGAGGGCAGGCCCTTCAGCATCATTTCTATGTG77923.538344171177389No Hit
CATAGAAGTATTCACACTGGGGCCCAGAACCCATTGTAGATTTCTTTCAC76643.4802194209321757No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGAGCATGCCTTTGATAAAAC74413.3789552076143425No Hit
CATAGATCTCACAGAAACTTCCTTGATGAGCATGCCTTTGATAAAACATC74153.367148617720783No Hit
CATAGAACACGAAGATTTCAGATTAGCCTCTCCAGTTTCTACGTGATCTA70413.1973153630980495No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAACAACAAAACTCGTGACTTCTA61622.7981618047734953No Hit
CATAGACCTCCCATGGTTCCTGATGAGCATGCCTTTGATAAAACATCTAT53822.443964107966724No Hit
CATAGAATCTGGTTCAAGCACACAGTTGTGGAAAGTGCAATGAGTCTATG49452.2455225778326735No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTTGTGGAAAGTGCAATGAG47852.172866640026156No Hit
CATAGATGGGACAGCGACAATGACAGTTGTGGAAAGTGCAATGAGTCTAT46482.1106549932793257No Hit
CATAGATCTAGCCCATCACTTCAGCAGGCCCTTCAGCATCATTTCTATGT39581.79732626148872No Hit
CATAGACCCTCTCTTACCCTTCCACCAACATGCTTTTAGTCACGTCTATG30491.3845497148254442No Hit
CATAGATGGCCCAGAATCCTTTGTAGATTTCTTTCACTCTCCCACCATTC25901.1761179932429977No Hit
CATAGATGGTATTTGAGTGGGGAAACAGGCCCTTCAGCATCATTTCTATG25291.148417916954263No Hit
CATAGATTCAGAGAAGGACAGCGTGGGCTGGTGTTTTCCTTGATCTATGT23941.087114469430014No Hit
CATAGATTCAGTTTACTTAGAGGCAGACAGTTGTGGAAAGTGCAATGAGT23251.0557815962509536No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCATGT18130.8232825952700985No Hit
CATAGAGCAACAATGAAGGTGCATAAAAACTGTCGGAGGTCTATGTGTAG15580.7074871943909616No Hit
CATAGAGCAAGCCCTCTAAGCCTATCAATCCTGTGTTCATGGCTTCTATG14400.6539034402586552No Hit
CATAGAAGTATTCACACTGGGGCCCATTGTAGATTTCTTTCACCTCCTCT14390.6534493406473645No Hit
CATAGACCAGTACGCCTTACCCCTTGGAGGCTGGAGAAAAAGCTCTATGT13400.6084934791295818No Hit
CATAGAACATTGATTCCTGGCATGTCAGACCCAGGCTACACATCTATGTG13400.6084934791295818No Hit
CATAGATTCCTCCAAAGACTGCAGGGTCCTAAATGTCTTTGTCCTTCTAT12400.5630835180005086No Hit
CATAGATCTCACAGAAACTTCCTTGATGATGGGAGTGTCTGCTGGTCTAT11930.5417408362698442No Hit
CATAGAGGCTTCCAGTCCTTTAAAATAAATGATGGGAGTGTCTGCTGGTC11650.5290260471537036No Hit
CATAGAACATTGATTCCTGGCATGTCCCATGATTTACCATCACAAATTTT10540.47862099030043226No Hit
CATAGATGGCAAATGGTGGGATCTCTATGTGTAGAACCATGTCGTCAGTG9050.4109601482181131No Hit
CATAGAGCAACCCCAGCAGTTTGAGAAAAGATGCAGTACAGCTCTATGTG8520.3868928688197043No Hit
CATAGATTCAGAGAAGGACAGCGTGGGTTGAGGGAGTCTTCTCTATGTGT7630.3464780034148291No Hit
CATAGATCTAGCCCATCACTTCAGCATCGCAGGCCCTTCAGCATCATTTC7420.3369419115777237No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGTGCATAAAAACTGTCGGAG7320.33240091546481637No Hit
CATAGACCCTCTCTTACCCTTCCACCCTGGGAGAAGAAATGTTGGTCTAT6880.3124205325680241No Hit
CATAGATCTAGCCCATCACTTCAGCAGCAGGCCCTTCAGCATCATTTCTA6140.2788171613325099No Hit
CATAGATCTAGCCCATCACTTCAGCATCAGCAGGCCCTTCAGCATCATTT5760.26156137610346203No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTAGCCCGTTCTCTCTGTT5720.2597449776582991No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGCCATGCTGAAGTCCCATGAT5570.2529334834889381No Hit
CATAGATGAAGGCAGAAAAGGAAGAACAGTTGTGGAAAGTGCAATGAGTC5250.23840229592763468No Hit
CATAGATTCTTTCCTGGCTGTGGGTGCATAAAAACTGTCGGAGGTCTATG4780.21705961419697023No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTGTGTTACAAAAATTGGGAAGCGG4530.20570712391470192No Hit
CATAGATTCTTTCCTGGCTGTGGGTGGGCTGGTGTTTTCCTTGATCTATG4460.2025284266356668No Hit
CATAGATGACATGGGAAATTATGCTGCTGGTCTATATGATGGGAGTGTCT4140.18799723907436336No Hit
CATAGAGGGGTAATACTTCCTACTTCTGCAGGCCCTTCAGCATCATTTCT3720.1689250554001526No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGCAGGCCCTTCA3550.16120536200821012No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTGACTGTTAATATAGAAG3490.1584807643404657No Hit
CATAGAGCAAGCCCTCTAAGCCTATCACTCTCCCACCATTCAGACTCTAT3470.15757256511788426No Hit
CATAGAGCTAATAAAGACATACCTGAGCCATGTCGTCAGTGTACCCTGGG3080.13986268027754567No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAGCAGGCC3010.13668398299851056No Hit
CATAGAGCAACCCCAGCAGTCTGAGAAAAGATGCAGTACAGCTCTATGTG3010.13668398299851056No Hit
CATAGAGTGTGTAGTGTGGTATAGCGTCAGTGTATGATGGGAGTGTCTGC2960.1344134849420569No Hit
CATAGATGGGACAGCGACAATGACAGTGCATAAAAACTGTCGGAGGTCTA2930.13305118610818467No Hit
CATAGAAGAAGAGGGTGTGGGGAAGGGTAAGAGAGACCCTGGGAGAAGAA2810.12760199077269588No Hit
CATAGAGGCTGCAGTGAACAATGATCGTCAGTGTGGTGGGTTGAGGGAGT2800.12714789116140518No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCATTGTGGGTTTTAACT2760.12533149271624222No Hit
CATAGAACATTGATTCCTGGCATGTCCACACTGACGAATGAGGAAACAGG2740.12442329349366078No Hit
CATAGAAATTTTTCAGAGACAGTTGGGACAGAGACAGTTGTGGAAAGTGC2720.1235150942710793No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTAGCAGGCCCTTCAGCA2700.12260689504849784No Hit
CATAGATGGTATTTGAGTGGGGAAACAGACACTCTATGTGTAGAACCATG2690.1221527954372071No Hit
CATAGAGCAACAATGAAGGTGCACAAAAACTGTCGGAGGTCTATGTGTAG2570.1167036001017183No Hit
CATAGATCTCCTCTCTGTAATGCACCAACATGCTTTTAGTCACGTCTATG2410.1094380063210666No Hit
CATAGAAGGAACAGCAGAGAGGGCAGTTGTGGAAAGTGCAATGAGTCTAT2380.10807570748719439No Hit
CATAGATCTAGCCCATCACTTCAGCACAGGCCCTTCAGCATCATTTCTAT2340.10625930904203146No Hit
CATAGATCTAGCCCATCACTTCAGCATCCAGGCCCTTCAGCATCATTTCT2330.10580520943074072No Hit
CATAGATTCCTCCAAAGACTGCAGGCCCTTCAGCATCATTTCTATGTGTA2300.10444291059686854No Hit
CATAGAATCTGGTTCAAGCACACAGTCTATGTGGACTGTTAATATAGAAG2260.1026265121517056No Hit
CATAGATCTAGCCCATCACTTCAGCATCATTTCTATGTGTAGAACCAGGC2250.10217241254041486No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)