FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38940
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA1919949.304057524396505No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA16004.108885464817668No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG9132.344632768361582No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG7091.8207498715973294No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT4731.2146892655367232No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTTGGAGAGGCACATCTATGTGTA4701.20698510529019No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT4681.2018489984591678No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC4551.1684643040575244No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG3520.903954802259887No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG3140.8063687724704675No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG1980.5084745762711864No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG1270.3261427837699024No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT1210.3107344632768362No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGATCA1190.30559835644581407No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA1160.2978941961992809No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1110.2850539291217257No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT1050.2696456086286595No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG1030.2645095017976374No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA980.2516692347200822No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCTTACGCAGTGTGTCTTTAGGCT960.2465331278890601No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT950.24396507447354907No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA900.23112480739599386No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTACCAGTGTAGCAGA870.22342064714946072No Hit
CATAGATTAGGGGTGACGGACTAGCCTACGGTAGCAAAGCTGCTATGGGA870.22342064714946072No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA860.22085259373394966No Hit
CATAGAGGGGAGACACTGGCTATAAGAACCATGTCGTCAGTGTACCAGTG840.21571648690292758No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA830.21314843348741652No Hit
CATAGACCAGCTTTGCATGAGTGTGGAACACCAGTGTAGCAGACCATCTT830.21314843348741652No Hit
CATAGAGGCTGGGTGACTTGGTGAATAACTCCTCTACCTAGTGATTACCT820.21058038007190552No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA810.20801232665639446No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT810.20801232665639446No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTGACTTGGCCTCAGTTTCC790.20287621982537238No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA790.20287621982537238No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG780.20030816640986132No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA780.20030816640986132No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA780.20030816640986132No Hit
CATAGACACCATTGGAGACCTGAGCACCTTCCACTCCAAAGCACAGTATC760.19517205957883924No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA750.1926040061633282No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC740.19003595274781715No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA740.19003595274781715No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA670.17205957883923986No Hit
CATAGAGGCTGGGTGACTTGGTGAATGTACCTAGTGATTACCTGGGTGAT660.1694915254237288No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG660.1694915254237288No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG650.16692347200821775No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA650.16692347200821775No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA640.16435541859270675No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG620.15921931176168463No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC590.15151515151515152No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA580.14894709809964046No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGACTTGGTCTCATAGAGGGG570.14637904468412943No Hit
CATAGATGATGTGAAAAGGACCCATGGGATGATGTGGCATGGAGAAGGGT560.1438109912686184No Hit
CATAGATGTGAGCACTACTGATAATCCCTACACTGGCCTCAGTTTCCCCT550.14124293785310735No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGATCTATGTGTAGAACCATGTC540.1386748844375963No Hit
CATAGAGGGGAGACACTGGCTATAAGAAATACCTGGGCGACCTCTCTATG540.1386748844375963No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGAAATACCTGGGCGACCTCTCT540.1386748844375963No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG540.1386748844375963No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGGCCTGTGT530.13610683102208526No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA520.13353877760657423No Hit
CATAGAGGTGAGCGGCTGTCTCCATCAATTTAAGGTAGGCACTTCCTCTA510.13097072419106318No Hit
CATAGACTTACTGCCCTCACTCCGTCACCCAGGCTGGAGTCCAGTAGCGT510.13097072419106318No Hit
CATAGATTAGGGGTGACGGACTAGCCATGCTGAAGTCCCATGATCTATGT500.12840267077555212No Hit
CATAGACCAGCTTTGCATGAGTGTGGGGAAGTAGGGAATGATTACAAGTT500.12840267077555212No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA490.1258346173600411No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTAGCAGAGACTTGGCCTCAGTTTC490.1258346173600411No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTGTACCAGTGTAGCAGACCATCTTC470.120698510529019No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG460.11813045711350795No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAAAGTGCTGGG450.11556240369799693No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCATAGATCAACATGAATGTTGGAGA430.11042629686697483No Hit
CATAGAGGGGAGACACTGGCTATAAGAATAGAGGGGAGACACTGGGGGCA420.10785824345146379No Hit
CATAGAGGTGAGCGGCTGTCTCCAGGAATCGGGGGCAGGCAGGGCTGTAC410.10529019003595276No Hit
CATAGATGACCTGTTAATCTGCCCCCAGATCACAGAGTGGCCTTGGGCAA410.10529019003595276No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCTGCGCAGAGCCTTCAGGTCA410.10529019003595276No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA400.1027221366204417No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC390.10015408320493066No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)