FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806911

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806911
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39140
Sequences flagged as poor quality0
Sequence length150
%GC39

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT23896.10373019928462No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC21855.582524271844661No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT20875.332141032192131No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA20565.252938170669392No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA20365.20183955033214No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA18354.68829841594277No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT15954.075114971895759No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG15653.9984670413898824No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA12133.099131323454267No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG10172.598364844149208No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA9462.416964741951967No Hit
CATAGACAGGGAGGCGTATAAGTGATGACTGATACAGGAAGGCCTTTCTA5961.5227388860500766No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACACTGACTGATACAGGAAG5821.486969851814001No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGATATGGTTCTACACA5011.280020439448135No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT4741.2110373019928462No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCGTCACCTTTCCCT4651.1880429228410834No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC4251.0858456821665814No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACTGATACAGGAAG4071.0398569238630557No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT3810.9734287174246296No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG3700.9453244762391415No Hit
CATAGACAGGGAGGCGTATAAGTGATGTCCTTTCCCTCACTCTCTCCATC3460.8840061318344404No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGCAAAATCCTGTCTCTA2790.71282575370465No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCTGCCTTCCTAACCATGGGCATA2720.6949412365866121No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA2630.6719468574348493No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC2550.6515074092999489No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG2100.5365355135411344No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA2080.5314256515074093No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCACATATCTACAACTATC1990.5084312723556463No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTATCCCCAGAAATGTTA1970.5033214103219213No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGTCTGTTATTCAAAGGTT1950.49821154828819625No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC1850.47266223811957075No Hit
CATAGATGCCCTTTTTGTGTACTTCCACTGACGACATGGTTCTACACATA1830.4675523760858457No Hit
CATAGAGATGTTTGATAAGCAGGGTGAACACTGACGACATGGTTCTACAC1810.46244251405212056No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA1780.4547777210015329No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGCACAGATCATTTAAGCTCAA1780.4547777210015329No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT1740.4445579969340828No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA1720.4394481349003577No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATATCCCCAGAAA1670.426673479816045No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAG1450.370464997445069No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATCTGTTATTCAAAGGTTTT1440.36791006642820645No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT1430.3653551354113439No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCACAATCCCCAGAAATGTTAGC1370.3500255493101686No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCTTGCACAGATCATTTAAGCTCAA1350.34491568727644356No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTCTCTA1350.34491568727644356No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA1330.33980582524271846No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT1270.32447623914154317No Hit
CATAGATGTCCATCATGTGGAAGCTGAGGCAGTACTCAGGAGGCTGAGGC1240.3168114460909555No Hit
CATAGATCCCATCCAATAATAATGAGCAGTGTACAAGCAATGGGGAAAGG1220.3117015840572304No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATACACTGACGACATGGTTCTA1200.3065917220235054No Hit
CATAGATCCCATCCAATAATAATGAGCACACTGACGACATGGTTCTACAC1150.29381706693919263No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC1150.29381706693919263No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG1120.286152273888605No Hit
CATAGAGAGATTTTGGGCTGAGACGATGCATGGTACTGGTACCAAAACAG1080.27593254982115484No Hit
CATAGATCATGGGACTTCAGCATGGCACTGGTACAAAAACAGACATATAG970.24782830863566682No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC960.2452733776188043No Hit
CATAGATGTCCATCATGTGGAAGCTGTCACAGACAAGCAATGGGGAAAGG950.24271844660194172No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAATGGGCAAGCAA920.2350536535513541No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC860.21972406745017886No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC850.21716913643331628No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATGAGACCAAGTCTCTGCTA820.20950434338272866No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA800.2043944813490036No Hit
CATAGATTGGAACTTTGCCAGCCTTCCTAACCATGGGCATATCTATGAGA760.1941747572815534No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC730.18650996423096575No Hit
CATAGATGCCCTTTTTGTGTACTTCCACCCTTTTTGTGTGCTTCTTTCAA710.18140010219724068No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT690.17629024016351558No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGATCAAACCCTGTCTCTA680.17373530914665303No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG670.17118037812979048No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATAGACC660.16862544711292796No Hit
CATAGAGCTGGCTTCCTAACTTCCAATAACAATGGGCAAGCAATGACAGT660.16862544711292796No Hit
CAAAGTCACGAAAGTGGGTCTATGAGACCAAGTCTCTGCTACCGTAGTCT630.16096065406234034No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA600.1532958610117527No Hit
CATAGAGAGATTTTGGGCTGAGACAATAATGCCGCATATCTACAACTATC590.15074092999489014No Hit
CATAGAGAGATTTTGGGCTGAGACAATGGGGTTTTCTAGATATACAATCA580.1481859989780276No Hit
CATAGATGCCCTTTTTGTGTACTTCCATAGATGCCCTTTTTGTGTGCTTC550.14052120592743994No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGCAATGGGCAAG550.14052120592743994No Hit
CATAGAGCGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC530.13541134389371487No Hit
CATAGAGCTGGCTTCCTAACTTCCAACAATGGGCAAGCAATGACAGTCTA530.13541134389371487No Hit
CATAGAACTTCACAAGGGCTTTAGAGGCTACACATGGCTATGCAATCTAT520.13285641287685232No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCTCATCTCTA500.12774655084312722No Hit
CATAGACACCATGCCTGGCTAATTTTTGTGTTTTTAGTAGAGAAGGGGTT470.1200817577925396No Hit
CATAGATCCCATCCAATAATAATGCGCAAGCAATGGGGAAAGGATTCTAT460.11752682677567705No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTACAGCATGGTACTGGTACCAAA450.11497189575881452No Hit
CATAGAGCGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA440.11241696474195197No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCCCTTCTGCTGGCTATTCTATG430.10986203372508943No Hit
CATAGATCATGGGACTTCAGCATGGCCAACATGGTGAAACCCTGTATCTA430.10986203372508943No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGATCCCCAGAAATGTTAGC410.10475217169136433No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)