FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806914

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806914
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences199831
Sequences flagged as poor quality0
Sequence length150
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCAGTATCCCAGTTAGCTCCTGACAATACCGCGTCTATGTGTAG107945.401564321851965No Hit
CATAGAAGAGAACCAAAAATGGACCCAGAAGAGAAGTACCAGGTCTATGT93444.675951178746041No Hit
CATAGATTCCCCTCATACCACGCCTCCCTCTACCAGCCTCAGTTCTATGT82544.130490264273311No Hit
CATAGAGGTGAGCGCCAGTCTCCCAGTAATCTATGTGTAGAACCATGTCG74633.7346557841375962No Hit
CATAGAAAAGGGAGGGATTACGGGTGACACCAAAAGCACAAGTTCTATGT58112.9079572238541567No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGTTGACAAACGACAGCTTCTAT54292.7167956923600443No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTCTTCTCTTCCCTCTATGTGT51152.559662915163313No Hit
CATAGATGGGTCCCATTCTGTTTGCAGGATGAATGGGGACATCTATGTGT46752.3394768579449634No Hit
CATAGATGAGGGATGTAGGCTGTACATGTACACGGCAGGACTGTCTATGT42192.111284035009583No Hit
CATAGAGGTGAGCGGCTGTCTCCAGTAATCTATGTGTAGAACCATGTCGT37371.8700802177840277No Hit
CATAGAACATCTCCCTGTTCCTCCCACCTAAACTCCTGAGATCCTCTATG36131.808027783477038No Hit
CATAGAGCAGTATCCCAGTCAGCTCCTGACAATACCGCGTCTATGTGTAG25011.2515575661433913No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCGTTTCCCCCATACTGTCTATGT24841.2430503775690458No Hit
CATAGAACTCTTACCCTTTTGCCAGGGCTGCATGGTGACTTTTCTATGTG23831.1925076689802883No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAAGAAAGAAAACCCACAAAAGAC22771.1394628461049585No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTATAGGAGTTGACAAAC20441.0228643203506964No Hit
CATAGATGGGTCCCAAAGTAGGCAATTCTATGTGTAGAACCATGTCGTCA20031.0023469832008047No Hit
CATAGACACTTGACCATGCCCTTGTTCGACACTTGAAAGCTCCCTGGATC18740.937792434607243No Hit
CATAGAAAAGTGTATTATGGGCCCAGGGCTGCATGGTGACTTTTCTATGT17150.8582252002942486No Hit
CATAGATCCATGGTGTGCAAGGACAATCACAGGGCTGCATGGTGACTTTT16890.8452142060040734No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGCTGCATGGTGACTTTT16070.8041795317042901No Hit
CATAGAGGCCATTCTTCTCATGCTGAAGGATAGTTGGGTGCTCTATGTGT14420.7216097602474091No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTAGGTGGCTTCTGGTGCAT14190.7101000345291771No Hit
CATAGATGGGTCCCATTCTGTTTGCACAGGACATTGGGGAATTCTATGTG13970.6990907316682597No Hit
CATAGAGGTGAGCGGCTGTCTCCCAGTAATCTATGTGTAGAACCATGTCG13700.68557931452077No Hit
CATAGAAAAGTGTATTATGGGCCCAGGAGGAGTTGACAAACGACAGCTTC12630.632034068788126No Hit
CATAGAAGGGGTGATGCTCTGATGGATCTCAGAGTTAGCTTGCCTCTATG12310.6160205373540643No Hit
CATAGAACTCTTACCCTTTTGCCAAGTAAGTCTACAAAGAACCTCTATGT12290.6150196916394353No Hit
CATAGATGAGGGATGTAGGCTGTACACGGCAGGGCTGCATGGTGACTTTT12030.6020086973492602No Hit
CATAGAGGGATGGTATCAGAGAAGGCTATAGATGTGGTTGCATGGGGGTC11120.556470217333647No Hit
CATAGACACTTGACCATGCCCTTGTTCTGAGGAAGTGACATGCCATCTAT10900.5454609144727295No Hit
CATAGACACTTGACCATGCCCTTGTTCTCATAGACACTTGAAAGCTCCCT10890.544960491615415No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCATGCTGAAGTCCCATGAT10830.5419579544715284No Hit
CATAGAACTGTCCCCTACTTTTCACCATACGCTAACTTCGCCTGCCTTTC10490.5249435773228378No Hit
CATAGAGGGATGGTATCAGAGAAGGCTGTCTCTCCCTCTCTCACACATCT10440.5224414630362656No Hit
CATAGATGGGTCCCATTCTGTTTGCATAGATGGGTCCCAAAGTAGGCAAT9900.4954186287412864No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGTAGAATCTTGAACTCAGG9550.47790382873528126No Hit
CATAGAGTTCCAGCAAAATGAAGGGGACCAGTTAGGCTACTTGGGGGTCT9480.4744008687340803No Hit
CATAGAACCAACCAATAATAATGTGCTTGTGACACCAAAAGCACAAGTTC9380.469396640160936No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTACGGTAGGTGGCTTCTGGTG9020.4513814172976165No Hit
CATAGACTGGCTATTGTTTGGTTTGTACATGTACACGGCAGGACTGTCTA8940.44737803443910107No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCATAATCTACAGAGTGGGAGTCAT8880.44437549729521447No Hit
CATAGAACTGTCCCCTACTTTTCACCATACGGTTGCAGGATGAATGGGGA8870.44387507443790003No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGTAGGTGGCTTCTGGTGCATCTA8650.4328657715769826No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGGATCTCAGAGTTAGCTTGCCTC8240.4123484344270909No Hit
CATAGAACATCTCCCTGTTCCTCCCAGATCTATGCAGAGTGGGAGTCATT8170.40884547442588987No Hit
CATAGACTTGTTGCCGAGACTGGAGTCATAGATGTGGTTGCATGGGGGTC8160.4083450515685754No Hit
CATAGATCCATGGTGTGCAAGGACAAGGGCAGGGATTCTATGTGTAGAAC8110.4058429372820033No Hit
CATAGACCAGGACAATCACAGGGCACCAAGGTCAAGGGCAGGGATTCTAT8010.400838708708859No Hit
CATAGACACTTGACCATGCCCTTGTTCTACGGTTGCAGGATGAATGGGGA7720.38632644584674053No Hit
CATAGACGTGTGGTTGGGATGTCAGCTCCTGACAATACCGCGTCTATGTG7700.3853256001321116No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCCATGCTGAAGTCCCATGATCTAT7390.3698124915553643No Hit
CATAGAACATCTCCCTGTTCCTCCCAAGGTCAAGGGCAGGGATTCTATGT7240.3623061486956478No Hit
CATAGAACTAGTTCCAGCACCACCAGTCTATGACCAAGGTCAAGGGCAGG7180.3593036115517612No Hit
CATAGAGGCCATTCTTCTCATGCTGGGTCCCAAAGTAGGCAATTCTATGT7050.35279811440667364No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGGTGGCTTCTGG6940.3472934629762149No Hit
CATAGAACCAACCAATAATAATGTGCTTGTTGATTTAGGAAGCAGGGTTC6620.3312799315421531No Hit
CATAGAACCAACATCTTAATAGCTAAAAGGTCTACGGTTGCAGGATGAAT6560.32827739439826653No Hit
CATAGATCCATGGTGTGCAAGGACAAGGACAGGGGTGTGGTGTTCTGTCT6560.32827739439826653No Hit
CATAGATGGGTCCCATTCTGTTTGCAGAGACTTGGTCTCATAGATGGGTC6250.3127642858215192No Hit
CATAGATCCATGGTGTGCACAGGACATTGGGGAATTCTATGTGTAGAACC6200.31026217153494706No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGATGCTCTGAGGAAGTGACATGC5790.2897448343850554No Hit
CATAGAGAAGCCAGGGAACAAAGTGGATCTCAGAGTTAGCTTGCCTCTAT5770.2887439886704265No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGAGTGGGAGTCATTCATGATCT5670.2837397600972822No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGCAGTTAGGCTACTTGG5600.28023680009608115No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGATCTCAGAGTTAGCTTGCC5540.2772342629521946No Hit
CATAGATGGGTCCCATTCTGTTTGCACTTGGTCTCATAGATGGGTCCCAA5500.2752325715229369No Hit
CATAGATGGCCCACTGACATTTTCCTGGCCAAGGTCAAGGGCAGGGATTC5430.27172961152173586No Hit
CATAGAACTGACCATACACTTGCCCTTCGTCTAGGATGAGATAATTGCCC5400.2702283429497926No Hit
CATAGAACTGTCCCCTACTTTTCACCAGTCTCATAGAACTTTCCCACCGC5290.26472369151933384No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGTGTATGTGAGTGCCAAATCTAT5200.26021988580350397No Hit
CATAGAACTGTCCCCTACTTTTCACCATAGAACTTTCCCACCGCCCTTTT5180.2592190400888751No Hit
CATAGAAAAGTGTATTATGGGCCCAGGCAGCTCCTCTTCTCTTCCCTCTA5150.2577177715169318No Hit
CATAGATCCATGGTGTGCAAGGACAAACACTGCTCACGATGGTATTACAT5110.2557160800876741No Hit
CATAGATTCTGTTTCTCTTCCCCCAAGGTCAAGGGCAGGGATTCTATGTG5100.25521565723035966No Hit
CATAGAACTAGTTCCAGCACCACCAGTGTCCAAGGTCAAGGGCAGGGATT5040.25221312008647306No Hit
CATAGAAGGATAAAGGCGGAAGAGAGCGCCAGTCTCCCAGTAATCTATGT4910.24570762294138546No Hit
CATAGAACTGTCCCCTACTTTTCACCACATAGAACTTTCCCACCGCCCTT4890.2447067772267566No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGACATGTTGCAGGATGAATGGGG4810.24070339436824115No Hit
CATAGAACTGACCATACACTTGCCCTTTTGCCAAGTAAGTCTACAAAGAA4730.2367000115097257No Hit
CATAGAACTAGTTCCAGCACCACCAGCTGCCAGGCTAGGCCTCCAAGGCT4730.2367000115097257No Hit
CATAGATTCTGTTTCTCTTCCCCCAAATTCTGCACATGTACACGGCAGGA4680.23419789722315354No Hit
CATAGAACTCTTACCCTTTTGCCAGGTAAGTCTACAAAGAACCTCTATGT4630.2316957829365814No Hit
CATAGAGAAGCCAGGGAACAAAGTGGGCAATTCTATGGGTAGGTGGCTTC4620.23119536007926697No Hit
CATAGACAATTTCAGTGCGGCCGATGTTCAAGAAAGAAAACCCACAAAAG4590.22969409150732367No Hit
CATAGATCCATGGTGTGCAAGGACATTGGGGAATTCTATGTGTAGAACCA4540.22719197722075152No Hit
CATAGAGCAGACAATGGATGATCAAGTGACACCAAAAGCACAAGTTCTAT4520.2261911315061227No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGACACTTGAAAGCTCCCTGG4460.22318859436223612No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGGTCCCAAAGTAGGCAATTC4370.21868478864640623No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGGGGTCTACATGTACACGGC4370.21868478864640623No Hit
CATAGATGGGTCCCATTCTGTTTGCATGGGTCCCAAAGTAGGCAATTCTA4210.21067802292937532No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTACGGTAGCAGACACTTGAAAGCT4040.20217083435502997No Hit
CATAGAGTTCCAGCAAAATGAAGGGGCATAGACACTTGAAAGCTCCCTGG3960.19816745149651457No Hit
CATAGATGAAAACATTCCGAAGCTAGATCAGTGTAAAGCAGCAAACAATT3960.19816745149651457No Hit
CATAGACCAGGACAATCACAGGGCACACACATGTACACGGCAGGACTGTC3870.19366364578068468No Hit
CATAGATGGGTCCCATTCTGTTTGCAGACTTGGTCTCATAGATGGGTCCC3870.19366364578068468No Hit
CATAGATCCATGGTGTGCAAGGACAAGTGCACAGTTTGGAATGACTCTAT3780.18915984006485478No Hit
CATAGACGTGTGGTTGGGATGTCAGCGTGTATGTGAGTGCCAAATCTATG3750.1876585714929115No Hit
CATAGACACTTGACCATGCCCTTGTTCGGTCTCATAGACACTTGAAAGCT3610.1806526514905095No Hit
CATAGATCCATGGTGTGCAAGGTCAAGGGCAGGGATTCTATGTGTAGAAC3570.17865096006125175No Hit
CATAGAACTCTTACCCTTTTGCCAGGATTGTAGAAGAAAGAAAACCCACA3530.17664926863199404No Hit
CATAGAGCTTCAGATTCCATAAGTCATCCTTCACCTCCCAGATCTATGTG3450.17264588577347859No Hit
CATAGAACATCTCCCTGTTCCTCCCAGTTAGGCTACTTGGGGGTCTCTAT3440.17214546291616414No Hit
CATAGACTGGTGTAATGTGTCATATACTTGGTACGGTAGCAGCTCCTCTT3350.1676416572003343No Hit
CATAGATGGCCCACTGACATTTTCCTGCTCACGATGGTATTACATGGTCT3350.1676416572003343No Hit
CATAGATGGGTCCCATTCTGTTTGCAGCAGAGACTTGGTCTCATAGATGG3230.1616365829125611No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAAGAAAGAAAACCC3200.1601353143406178No Hit
CATAGATTCTGTTTCTCTTCCCCCAAAGACTTTCTGAAAATGTTTGCTAT3100.15513108576747353No Hit
CATAGACAGGGGCCAGAACTCCTAAGCAGAGACTTGGTCTCATAGACAGG3100.15513108576747353No Hit
CATAGATGAGGGATGTAGGCTGTACACATGTACACGGCAGGACTGTCTAT3080.15413024005284465No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTCGTCAGTGTAAAGCAGCAAACAA3030.15162812576627252No Hit
CATAGATCCATGGTGTGCAAGGACAATACGGTTGCAGGATGAATGGGGAC3030.15162812576627252No Hit
CATAGACACTTGACCATGCCCTTGTTCATAGACACTTGAAAGCTCCCTGG3030.15162812576627252No Hit
CATAGATCCATGGTGTGCAAGGACAGGGGTGTGGTGTTCTGTCTATGTGT2970.14862558862238592No Hit
CATAGAATAGCTGTGTTGAAGAACCTCAGGGCTGCATGGTGACTTTTCTA2910.14562305147849933No Hit
CATAGATCTACTCCTACAATCTTGGCAAAAGGGGTGACACCAAAAGCACA2830.1416196686199839No Hit
CATAGATCCATGGTGTGCAAGGACAACTTGGTCTCATAGATCCATGGTGT2820.14111924576266946No Hit
CATAGACAGGGGTGTGGTGTTCTGTCTATGTGTAGAACCATGTCGTCAGT2820.14111924576266946No Hit
CATAGAGGCCATTCTTCTCATGCTGGATCTCAGAGTTAGCTTGCCTCTAT2810.14061882290535502No Hit
CATAGAAGGGGTGATGCTCTGATGGAAAAGCAGCAAACAATTTCAGAAAG2810.14061882290535502No Hit
CATAGAACTGACCATACACTTGCCCTATAGATGTGGTTGCATGGGGGTCT2800.14011840004804058No Hit
CATAGATGGGTCCCATTCTGTTTGCAGTCTCATAGATGGGTCCCAAAGTA2750.13761628576146845No Hit
CATAGAACATCTCCCTGTTCCTCCCATACGGTAGCAGCTCCTCTTCTCTT2730.13661544004683956No Hit
CATAGACTCAGAACTGGCTCTAATTCCTAGAAGGTAGGTGGCTTCTGGTG2670.133612902902953No Hit
CATAGAGGTGTTAAGTGTGCCCATTGTGAGCAGAGACTGGGTCCCAAAGT2530.12660698290055097No Hit
CATAGAGCTGAGAAGGTAGGTAAAGGGGCAGGGCTGCATGGTGACTTTTC2460.12310402289934996No Hit
CATAGAGTTCCAGCAAAATGAAGGGGTGCTGCTCACGATGGTATTACATG2350.11759937146889121No Hit
CATAGACAGGGGCCAGAACTCCTAAGGACAGGGGTGTGGTGTTCTGTCTA2320.11609810289694791No Hit
CATAGAGAAGGAAAACTGGGCTGTGGCCGAGTGAGCTACTGTCACAAGGA2310.11559768003963349No Hit
CATAGACTCAGAACTGGCTCTAATTCCTGGATCTCAGAGTTAGCTTGCCT2220.11109387432380362No Hit
CATAGATTCCCCTCATACCACGCCTCAGTTCTATGTGTAGAACCATGTCG2210.11059345146648919No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2190.10959260575186033No Hit
CATAGATGGGTCCCATTCTGTTTGCAGATGGATCTCAGAGTTAGCTTGCC2170.10859176003723146No Hit
CATAGAGAAGGAAAACTGGGCTGTGGTGTTCACAGGGGTGTGGTGTTCTG2140.10709049146528818No Hit
CATAGATGGCCCACTGACATTTTCCTCTTCACCTGTCCTCTTCACCTCCC2010.10058499432020057No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)