FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806921

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806921
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36481
Sequences flagged as poor quality0
Sequence length150
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC394310.80836599873907No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA23286.381404018530194No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA20755.6878923275129525No Hit
CATAGATCATGGGACTTCAGCATGGAGACAGCCGCTCACCTCTATGAGAC19265.279460541103588No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT18665.114991365368274No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA17044.670924590882925No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG14213.8951783119980266No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA13333.6539568542528986No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT12813.5114169019489596No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG12343.3825827142896303No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG7552.069570461336038No Hit
CATAGAACCTCTTTTGGGGCAAAGTTCCAATACAAGCAATGGGGAAAGGA6811.8667251445958168No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGACACTGACTGATACAGGAAG6261.715961733505112No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG6051.6583975219977523No Hit
CATAGAGATGTTTGATAAGCAGGGTGACTGATACAGGAAGGCCTTTCTAT5781.584386392916861No Hit
CATAGAGCAACAGGGACTCTCATTCACACTGACGACATGGAGACAGCCGC5711.5651983224144077No Hit
CATAGACAGGGAGGCGTATAAGTGATGTACCATGTTTTCATCCTGCTTCT5121.4034702996080153No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT4701.2883418765932952No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT4211.1540253830761218No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCTCTGCTACCGTAA4191.148543077218278No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA3560.975850442696198No Hit
CATAGACAGGGAGGCGTATAAGTGATGACAGTCTATGAGACCAAGTCTCT3480.9539212192648228No Hit
CATAGATCATGGGACTTCAGCATGGCCATTTGAACCTGATTGGCCATTTG3390.9292508429045255No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA2810.7702639730270552No Hit
CATAGATCATGGGACTTCAGCATGGCATACCTTCCTAACCATGGGCATAT2570.7044763027329295No Hit
CATAGATCCCATCCAATAATAATGAGCAGAATTACCTCTGGATGGTCTAT2500.6852882322304761No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT2440.6688413146569447No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGACAGCCGCTCACCTCTATGA2170.5948301855760533No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT2100.5756421150736No Hit
CATAGACCTTTGGGTTCATATCATCTGGCTACACATGGCTATGCAATCTA2070.5674186562868343No Hit
CATAGATCCCATCCAATAATAATGAGCAACACTGACTGATACAGGAAGGC2010.5509717387133027No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATGGAGACAGCCGCTCACCTCT1660.45503138620103617No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATGTTCTACACAAAGTCACGAA1480.4056906334804418No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACAATCCCCAGAAATGTTAGCA1360.37279679833337903No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC1220.33442065732847237No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG1200.32893835147062855No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC1080.2960445163235657No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC1020.27959759875003426No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG990.27137413996326853No Hit
CATAGATCATGGGACTTCAGCATGGCAAGCAATGGGGAAAGGATTCTATG960.26315068117650287No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACACTGACGACATGGTTCTACA920.25218606946081523No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTGTTGATTGTGTTATTGGTAAGG900.24670376360297142No Hit
CATAGATCATGGGACTTCAGCATGGCTTCCTAACCATGGGCATATCTATG880.24122145774512757No Hit
CATAGATCATGGGACTTCAGCATGGCTACGGTAGCAGAATTACCTCTGGA780.21380992845590857No Hit
CAAAGTCACGAAAGTGGGTCTATGAGACCAAGTCTCTGCTACCGTAACCA770.21106877552698666No Hit
CATACTCAGGAGGCTGAGGCAGTCTATGAGACCAAGTCTCTGCTACCGTA750.20558646966914282No Hit
CCTGATTGGCCATTTGAACTCTATGAGACCAAGTCTCTGCTACCGTAACC740.2028453167402209No Hit
CATAGATGTATACAAGCTGTCACAGACAACAAGCAATGGGGAAAGGATTC740.2028453167402209No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA720.19736301088237712No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCATAGATGGAGACAGCCGCTCA640.1754337874510019No Hit
CATAGATCATGGGACTTCAGCATGGACAAGCAATGGGGAAAGGATTCTAT630.17269263452207997No Hit
CATAGAGAGATTTTGGGCTGAGACGAGTTCTGCTACCTTTCCCTCACTCT630.17269263452207997No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATCTCATAGAATCCTTTCCCTC590.16172802280639237No Hit
CATAGATGCCCTTTTTGTGTGCTTCTTTCAAAAGTCTGGTCTATGAGACC580.15898686987747046No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTATGAGACCAAGTCT570.15624571694854855No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT520.14253995230393904No Hit
CATAGAGCTGGCTTCCTAACTTCCAAGCTGCCTTCCTAACCATGGGCATA500.13705764644609522No Hit
CATAGATGTCCATCATGTGGAAGCTGGCTATTCTATGAGACCAAGTCTCT490.1343164935171733No Hit
CATAGATCATGGGACTTCAGCATGGCTATGCAATCTATGAGACCAAGGCT490.1343164935171733No Hit
CATAGACAGGGAGGCGTATAAGTGATGACACTGACGACATGGTTCTACAC480.13157534058825143No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCCAATGGGCA470.1288341876593295No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTACTATCCCCAGAAATGTTAGCA460.12609303473040762No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGTTCTACACA460.12609303473040762No Hit
CATAGATCATGGGACTTCAGCATGGCCAAGCAATGGGGAAAGGATTCTAT450.12335188180148571No Hit
CATAGATTCTGAAGAAATCAGATAGAGAGAAACACACTGACGACATGGAG450.12335188180148571No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACTGATACAGGAAGGCCT450.12335188180148571No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCCTTCTGCTGGCTATT440.12061072887256379No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACAATGGGCAAGCAATGACAGTCT430.11786957594364189No Hit
CATAGATCATGGGACTTCAGCATGGCACACTGACGACATGGAGACAGCCG430.11786957594364189No Hit
CATAGAGGATCCCATCTGAGTTGGTCTCATAGATGGAGACAGCCGCTCAC420.11512842301472No Hit
CATAGATGAAAGCCTGTTGAATTTATGAGACCAAGTCACCTGATTGGCCA410.1123872700857981No Hit
CATAGATCCCATCCAATAATAATGAGCAATGGGCAAGCAATGACAGTCTA390.10690496422795429No Hit
CATAGATGTCCATCATGTGGAAGCTGGCTATTCTATGAGACTGCTTCCTT380.10416381129903238No Hit
CATAGATTGGAACTTTGCCAGCCTTCCTAACCATGGGCATATCTATGAGA380.10416381129903238No Hit
CTGACTGATACAGGAAGGCCTTTCTATGAGACCAAGTCTCTGCTACCGTA370.10142265837011046No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)