FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806923

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806923
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences159559
Sequences flagged as poor quality0
Sequence length150
%GC42

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAAAACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT1810711.3481533476645No Hit
CATAGATCATGGGACTTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCG112827.070738723606941No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT86305.408657612544577No Hit
CATAGAGCAACAGGGACTCTCATTCACTGCTGGTGGGAATGCAAACTGGA73784.623994885904273No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGGAAAGGATTCTAT54793.433839520177489No Hit
CATAGACAGGGAGGCGTATAAGTGATGAAATCTCTACTAAAAATACAAAA49663.1123283550285477No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTACACATGGCTATGCAATCTAT46642.9230566749603595No Hit
CATAGACCTGGGCTTAGGGGCTATACATGGCTATGCAATCTATGAGACCA45582.8566235687112607No Hit
CATAGACCTGGGCTTAGGGGCTACACATGGCTATGCAATCTATGAGACCA42642.6723657079826273No Hit
CATAGAGAGATTTTGGGCTGAGACGATAATGCCGCATATCTACAACTATC42212.645416429032521No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGGGCAAGCAATGACAG36502.287555073671808No Hit
CATAGATCCCATCCAATAATAATGAACAAGCAATGGGGAAAGGATTCTAT33812.1189653983792827No Hit
CATAGAAACCCCAAAGGCTATGTTCATTCTATGCCTTCATTCTGCCTGCA31221.9566429972612012No Hit
CATAGACCAATAAAAGTTGATGGGATGAAGTAAGAAACATTTTAGAGCAC29801.8676477039841062No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTTCCTTCTGCTGGCTATTCTATG27451.7203667608846884No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGATAGGGTT25011.5674452710282716No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCATATGTCTTTATCAGCAGCATT19791.2402935591223307No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACACTCA17401.0905057063531358No Hit
CATAGACACCATGCCTGGCTAATTTTTTGCGTTTTTAGTAGAGATGGGGT16791.0522753338890316No Hit
CATAGATCCTCTCATTGTCCAGTTTGGAGACAGCCGCTCACCTCTATGAG16511.0347269662005905No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGT15270.9570127664374933No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATGAGAC14860.9313169423222758No Hit
CATAGACCTTTGGGTTCATATCATCTGGAGACAGCCGCTCACCTCTATGA12330.7727549057088601No Hit
CATAGATGCCCTTTTTGTGTACTTCCACACTGACGACATGGTTCTACACA11420.7157227107214259No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATATCCCCAGAAATGTTAGCA11050.6925337962759858No Hit
CATAGAAACCCCAAAGGCTATGTTCAAAATGGTCAAACAGGAGGTCTATG8590.5383588515846802No Hit
CATAGACCTGGGCTTAGGGGCTATACGTGAATGTGGATCAGAACTTCTAT8590.5383588515846802No Hit
CATAGAGCCAAGGAAAGTTGAATGGAGACAGCCGCTCACCTCTATGAGAC8230.5157966645566844No Hit
CATAGACACCATGCCTGGCTAATTTTTTAAAAATTGATTTTTGTAGAGAC7670.4806999291798018No Hit
CATAGAGCTGGCTTCCTAACTTCCAATCTGTGAGTTGCTGATGCATCTAT7290.4568842873169172No Hit
CATAGACACCATGCCTGGCTAATTTTTACGGTTGCACAGATCATTTAAGC7210.45187046797736263No Hit
CATAGAGAGATTTTGGGCTGAGACGAAGTTACAAGCAATGGGGAAAGGAT6610.41426682293070277No Hit
CATAGACACCATGCCTGGCTAATTTTTAAATATTTTGTAGAGACCGGGTT5660.3547277182734913No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTATTCTGTTATTCAAAGGTTT5580.3497138989339367No Hit
CATAGACAATTAAATTTTCTTAAGGGGTTGATTTAATAAATTGTGAAATG5570.3490871715164923No Hit
CATAGACACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTT5290.33153880382805107No Hit
CATAGATCCCATCCAATAATAATGAGCAACACTGACTGATACAGGAAGGC5200.32589825707105213No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGCGTATTCTAAATATACAATCA5120.32088443773149744No Hit
CATAGACACCATGCCTGGCTAATTTTTTTGTGTTTTTGGTAGAGATGGGG5120.32088443773149744No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACATGCC5080.3183775280617201No Hit
CATAGAGATGTTTGATAAGCAGGGTGACTAGAGTTAATGGTAATTTATTG4500.2820273378499489No Hit
CATAGATTTGTAAATTGCCTAGTCTTGCACAGATCATTTAAGCTCAATCT4280.26823933466617367No Hit
CATAGACACCATGCCTGGCTAATTTTAAAATTAGTACCTATAATCTCAGC4270.2676126072487293No Hit
CATAGAGATGTTTGATAAGCAGGGTGAAACCCTGTCTCTACTAAAAATAC4180.26197206049173033No Hit
CATAGACAGGGAGGCGTATAAGTGATGGAGCAGAATTACCTCTGGATGGT4160.2607186056568417No Hit
CATAGAGCCAAGGAAAGTTGAATGGAACATAGAGGATCCCACCTGATTGG4040.2531978766475097No Hit
CATAGAACACAGAGTCACAGTCCCCAGTCAATTCCCAGACATAAGCCAGT4000.25069096697773235No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTCAGTACAAAATTTCTC3890.24379696538584472No Hit
CATAGACACCATGCCTGGCTAATTTTTTGTATTAATCCCAGCTACTCAGG3750.2350227815416241No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTATCCCCAGAAATGTTAGCATGT3450.21622095901829416No Hit
CATAGAGCTGGCTTCCTAACTTCCAAACTTCCTAACTTCCTAACTTCCTA3400.21308732193107252No Hit
CATAGATCATGGGACTTCAGCATGGCTACTGTGGCAAAACCTCATCTCTA3200.20055277358218593No Hit
CATAGATCATGGGACTTCAGCATGACGGTGTTTGCAGATTTGGACCTGCG3090.19365877199029824No Hit
CATAGAACTTCACAAGGGCTTTAGGGCTACACATGGCTATGCAATCTATG3050.19115186232052092No Hit
CATAGATCATGGGACTTCAGCATGGCTACACATGGCTATGCAATCTATGA2930.18363113331118897No Hit
CATAGAGCAACAGGGACTCTCATTCACTGCTGGTGGAATGCAAACTGGAG2850.17861731397163433No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAATCA2820.1767371317193013No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGTATCCCCAGAAATG2770.17360349463207966No Hit
CATAGAACTTCACAAGGGCTTTAGGGGCTATACGTGAATGTGGATCAGAA2690.16858967529252503No Hit
CATAGATGTCCATCATGTGGAAGCTGCCTTCCTAACCATGGGCATATCTA2650.1660827656227477No Hit
CATAGATCATGGGACTTCAGCATGGCTAATTTTTGTATTTTTAGTAGAGA2570.16106894628319304No Hit
CATAGATGTCAAGAGTCTAATTCCTGCTCTGTTATTCAAAGGTTTTCTGC2480.15542839952619406No Hit
CATAGATCCCATCCAATAATAATGAGCAAGCAATGACAGTCTATGAGACC2440.15292148985641674No Hit
CATAGAACTTCACAAGGGCTTTAGGGTATTTTTTAAGGCAATTGAAGAGT2250.14101366892497444No Hit
CATAGATTGGAACTTTGCCAGCCTTACCAACATGGTGAAACCCTGCCTCT2240.14038694150753012No Hit
CATAGACACCATGCCTGGCTAATTTTTATATTAGCTACTCAGGAGGCTGA2180.13662657700286415No Hit
CATAGAGAGATTTTGGGCTGAGACGATGGGGTTTTCTAGATATACAACAA2140.13411966733308683No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTCAGTTCCCAGACATAAGCCAGT2110.13223948508075384No Hit
CATAGACCCCATGCCTGGCTAATTTTTGTATTTTTAGTAGAGACAGCGTT2090.13098603024586516No Hit
CATAGATCCCATCCAATAATAATGAGCATACGTGAATGTGGATCAGAACT2070.12973257541097652No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATATCCC2040.12785239315864352No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTACCATGTTTTCATCCTG2000.12534548348886618No Hit
CATAGATGCCCTTTTTGTGTACTTCCATGTGCTTCTTTCAAAAGTCTGGT1990.12471875607142187No Hit
CATAGAGGATCCCATCTGAGTTGGTCTATGAGACCAAGTCTCTGCAGCAG1950.12221184640164454No Hit
CATAGAGCTGGCTTCCTAACTTCCAATAACAATGGGCAAGCAATGACAGT1920.12033166414931154No Hit
CATAGAGCCAAGGAAAGTTGAATGGATGAAGTAAGAAACATTTTAGAGCA1910.11970493673186722No Hit
CATAGAAAACAGAGTCACAGTCCCCAGTAATGTTAGCATGTCTATCCCCA1880.11782475447953422No Hit
CATAGACACCATGCCTGGCTAATTTTTGTATTTTTAGTGGTGCACACGCC1830.11469111739231257No Hit
CATAGATCATGGGACTTCAGCATGGCCCACATAGTGAAATCCTGTCTCTG1700.10654366096553626No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)