FastQCFastQC Report
Wed 28 Jun 2023
EGAF00005806928

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005806928
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59263
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA2635144.46450567807907No Hit
CATAGACCAGCTTTGCATGAGTGTGGTTAATGAAGCTCTTCCATGTCCCA31115.249481126503889No Hit
CATAGACCTCCTTTCCTCCACGGCAAACACTCAAAACAGCCCTCTATGTG16072.7116413276411926No Hit
CATAGATACGATCATAAGGGTGGGGCGAAAGTGATCAGAAGCTCTATGTG11841.9978738842110593No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTTAATCTATGTGTAGAACCAT8521.437659247759985No Hit
CATAGACACCATTGGAGACCTGAGCATCCCTCATTACTCTGGTTCTATGT8021.353289573595667No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTATTAGCGAGACTCTA6691.1288662403185798No Hit
CATAGACCAGCTTTGCATGAGTGTGGGAAGTAGGGAATGATTACAAGTTC6281.0596831075038389No Hit
CATAGACACACCCAACTCTGCTCAGTCTGCATAGCCACATCTATGTGTAG5951.0039991225553886No Hit
CATAGATGGTGGGTTCTGGAGAGAGCATCCCTCATTACTCTGGTTCTATG5000.8436967416431838No Hit
CATAGACCAGCTTTGCATGAGTGTGGCCTGTGTTCTTTGCATGATCTATG4640.7829505762448745No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGACACTGGGGGCACAAAGTTCT4540.7660766414120108No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTTACGGTAGCAAAGCT3850.6496464910652515No Hit
CATAGACACACCCAACTCTACTCAGTCTGCATAGCCACATCTATGTGTAG2510.4235357643048782No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACTTGGTCTCATAGAGGGGAG2400.40497443598872823No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTACGGTAGCAAAGCTG2320.39147528812243726No Hit
CATAGAGTCTCAATTATTCATCTCAACATGCTACTATGAATGTTGGAGAG2100.3543526314901372No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGATCTATGTGTAGAACCATGTC1960.330729122724128No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCCTCAGGTCA1820.3071056139581189No Hit
CATAGACCTGACCTCATGATCTGCCTGTGTTCTTTGCATGATCTATGTGT1810.3054182204748325No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCGGGTCA1730.29191907260854155No Hit
CATAGATACGATCATAAGGGTGGGGCTGGGCTCAGTGGCTTATGCCTGTA1670.2817947117088234No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTCCAGGTCA1500.25310902249295514No Hit
CATAGATGATGTGAAAAGGACCCATGGTCATAGATTTATCCAGCATGCCC1490.25142162900966875No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGG1480.2497342355263824No Hit
CATAGATGATGTGAAAAGGACCCATGGCGTCAGTGTACCAGTGTAGCAGA1440.24298466159323692No Hit
CATAGACTGGCGGTGATTGCTTTCCTCCACGGCAAACACTCAAAACAGCC1380.2328603006935187No Hit
CATAGACTTACTGCCCTCACTCCGTCTGCATAGCCACATCTATGTGTAGA1350.2277981202436596No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCTATGTGTAGAACCATGTCGTC1320.2227359397938005No Hit
CATAGACCAGCTTTGCATGAGTGTGGCATGGAGAAGGGTCTATGTGTAGA1300.21936115282722776No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGAGACACTGGGGGCACAAAG1250.21092418541079594No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCG1240.20923679192750957No Hit
CATAGAGGTGAGCGGCTGTCTCCACGAGTCCGCGCAGAGCCTTCAGGTCA1230.2075493984442232No Hit
CATAGACTTTTCCTCCAATATAGCTGCACTAGCAGGGACTTGGCCTCAGT1160.19573764406121863No Hit
CATAGAGGTGAGCGGCTGTCTCCAAGTCCGCGCAGAGCCTTCAGGTCAGA1150.19405025057793227No Hit
CATAGAGGTGAGCGGCTGTCTCCAGAAGTCCGCGCAGAGCCTTCAGGTCA1130.19067546361135954No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCACGGCAAACACTCAAAACAGCCCT1130.19067546361135954No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCCGCCTCCCAAAGTGCTGGG1100.18561328316150041No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCTTGGCCTCAGTTTCCCCTCCTTC1090.18392588967821405No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAAGCAGATCTGTGTTCTATGTGTA1080.1822384961949277No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGGGCCTTCAGGTCA1080.1822384961949277No Hit
CATAGACCTGACCTCATGATCTGCCTACCTCAGCCTCCCAGATTGCTGGG1050.1771763157450686No Hit
CATAGAGGGGAGACACTGGGGGCACAAAGTTCTATGTGTAGAACCATGTC1040.17548892226178223No Hit
CATAGACTTACTGCCCTCACTCCGTCAGTGTACCTCCAAGCAGATCTGTG1040.17548892226178223No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGG1020.1721141352952095No Hit
CATAGATGATGTGAAAAGGACCCATGGGATGATGTTTTAAAATGAGCACC990.16705195484535038No Hit
CATAGATTAGGGGTGACGGACTAGCCCTTGGCCTCAGTTTCCCCTCCTTC980.165364561362064No Hit
CATAGAGTTATTCAGAGAGAGGGGAAATGAATGTTGGAGAGGCACATCTA980.165364561362064No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGCCA950.16030238091220492No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCAGAGACTTGGCCTCAGTTTCCCCT920.15524020046234582No Hit
CATAGAGGTGAGCGGCTGTCTCCACAGGTCCGCGCAGAGCCTTCAGGTCA880.14849062652920034No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGAGGGGAGACACTGGGGGCACA880.14849062652920034No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCGGAGCCTTCAGGTCA860.1451158395626276No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTTCCCTTGCCCTGTGGCCCTGGCT820.13836626562948212No Hit
CATAGAGGGGAGACACTGGCTATAAGAACTTGGTCTCATAGAGGGGAGAC820.13836626562948212No Hit
CATAGATGATGTGAAAAGGACCCATGGCCTCAGTTTCCCCTCCTTCTATG810.13667887214619578No Hit
CATAGACTTACTGCCCTCACTCAGTCTGCATAGCCACATCTATGTGTAGA810.13667887214619578No Hit
CATAGACCAAACACAGAAGACATGGCAAACACTCAAAACAGCCCTCTATG800.13499147866290942No Hit
CATAGACCTGACCTCATGATCTGCCTGCCTCGGCCTCCCAAAGTGCTGGG790.13330408517962303No Hit
CATAGATGACCTGTTAATCTGCCCCCACCTCTTCCTTACATGCCGTGTGT770.1299292982130503No Hit
CATAGATGTTTGAAACTCCTCTACCTAAGAAATACCTGGGCGACCTCTCT770.1299292982130503No Hit
CATAGATGACCTGTTAATCTGCCCCCGTAACCAGTGTAGCAGACCATCTT760.12824190472976393No Hit
CATAGAGGTGAGCGGCTGTCTCCACAAGCCCGCGCAGAGCCTTCAGGTCA720.12149233079661846No Hit
CATAGATGATGTGAAAAGGACCCATGGGTCTCATAGATGAATGTTGGAGA710.1198049373133321No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCTGTAGCAGAGACTTGGCCTCAGTT700.11811754383004573No Hit
CATAGAGTTTGCCCTTCCTTCCCTCCCGGATTCAAGCAATTCTTCTATGT690.11643015034675935No Hit
CATAGATGGTGGGTTCTGGAGAGAGGGCGAAAGTGATCAGAAGCTCTATG690.11643015034675935No Hit
CATAGATGTGAGCACTACTGATAATCCCTGCACACTACAATTACAGTACT680.11474275686347299No Hit
CATAGATGTGAGCACTACTGATAATCCCTGATGTGGCATGGAGAAGGGTC680.11474275686347299No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGACACTGGGGGCACAAAGTTCT660.11136796989690025No Hit
CATAGAGATGATGGGATCTTATATTTGGAAAAACTAGCTGGCTGTGGAGG660.11136796989690025No Hit
CGTAGAGGTGAGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCA660.11136796989690025No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGGGGAGACACTGGGGGCACAAA630.10630578944704117No Hit
CATAGATTAGGGGTGACGGACTAGCCGACTTGGCCTCAGTTTCCCCTCCT600.10124360899718206No Hit
CATAGAGGGGAGACACTGGCTATAAGAAGCAGAGACTTGGTCTCATAGAG600.10124360899718206No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)